RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 PLGLAQ15195 96 aa10.9□□□□□ -0.66
RNF43-202ENST00000577625 TMEM95Q3KNT9 176 aa10.9□□□□□ -0.66
RNF43-202ENST00000577625 SRSF12Q8WXF0 261 aaKnown RBP10.9□□□□□ -0.66
RNF43-202ENST00000577625 CHCHD1Q96BP2 118 aaKnown RBP10.9□□□□□ -0.66
RNF43-202ENST00000577625 SERTAD4Q9NUC0 356 aa10.9□□□□□ -0.66
RNF43-202ENST00000577625 CSMD2Q7Z408 3487 aa10.9□□□□□ -0.66
RNF43-202ENST00000577625 MGST1P10620 155 aaKnown RBP10.9□□□□□ -0.66
RNF43-202ENST00000577625 CRYBA4P53673 196 aa10.9□□□□□ -0.66
RNF43-202ENST00000577625 PAX8Q06710 450 aa10.9□□□□□ -0.66
RNF43-202ENST00000577625 CD300EQ496F6 205 aaPredicted RBP10.9□□□□□ -0.66
RNF43-202ENST00000577625 TCTEX1D4Q5JR98 221 aa10.9□□□□□ -0.66
RNF43-202ENST00000577625 SRSF8Q9BRL6 282 aaKnown RBP10.9□□□□□ -0.66
RNF43-202ENST00000577625 NAV2Q8IVL1 2488 aa10.9□□□□□ -0.67
RNF43-202ENST00000577625 TRAV26-1A0A087WT03 109 aa10.89□□□□□ -0.67
RNF43-202ENST00000577625 COL8A1P27658 744 aa10.89□□□□□ -0.67
RNF43-202ENST00000577625 SAA4P35542 130 aa10.89□□□□□ -0.67
RNF43-202ENST00000577625 EBI3Q14213 229 aa10.89□□□□□ -0.67
RNF43-202ENST00000577625 URB1-AS1Q96HZ7 61 aa10.89□□□□□ -0.67
RNF43-202ENST00000577625 THYN1Q9P016 225 aa10.89□□□□□ -0.67
RNF43-202ENST00000577625 OR5AL1P0C617 328 aa10.89□□□□□ -0.67
RNF43-202ENST00000577625 MFAP2P55001 183 aa10.89□□□□□ -0.67
RNF43-202ENST00000577625 HES1Q14469 280 aa10.89□□□□□ -0.67
RNF43-202ENST00000577625 Q8N6K4 173 aa10.89□□□□□ -0.67
RNF43-202ENST00000577625 STXBP6Q8NFX7 210 aa10.89□□□□□ -0.67
RNF43-202ENST00000577625 MAP1LC3CQ9BXW4 147 aa10.89□□□□□ -0.67
RNF43-202ENST00000577625 SPCS1Q9Y6A9 102 aa10.89□□□□□ -0.67
RNF43-202ENST00000577625 IGHV1-24A0A0C4DH33 117 aa10.88□□□□□ -0.67
RNF43-202ENST00000577625 CRYGCP07315 174 aa10.88□□□□□ -0.67
RNF43-202ENST00000577625 APELAP0DMC3 54 aa10.88□□□□□ -0.67
RNF43-202ENST00000577625 GDF5OSQ5U4N7 250 aa10.88□□□□□ -0.67
RNF43-202ENST00000577625 F11RQ9Y624 299 aaKnown RBP10.88□□□□□ -0.67
RNF43-202ENST00000577625 HELZ2Q9BYK8 2649 aaKnown RBP10.88□□□□□ -0.67
RNF43-202ENST00000577625 TEX48A0A1B0GUV7 120 aa10.87□□□□□ -0.67
RNF43-202ENST00000577625 A0A1W2PPM0 123 aa10.87□□□□□ -0.67
RNF43-202ENST00000577625 GAGE12HA6NDE8 117 aa10.87□□□□□ -0.67
RNF43-202ENST00000577625 IGLV2-8P01709 118 aa10.87□□□□□ -0.67
RNF43-202ENST00000577625 DSCR9P59020 149 aa10.87□□□□□ -0.67
RNF43-202ENST00000577625 RPL24P83731 157 aaKnown RBP10.87□□□□□ -0.67
RNF43-202ENST00000577625 C5orf64Q2M2E5 130 aa10.87□□□□□ -0.67
RNF43-202ENST00000577625 PIP4P2Q8N4L2 257 aa10.87□□□□□ -0.67
RNF43-202ENST00000577625 THAP8Q8NA92 274 aa10.87□□□□□ -0.67
RNF43-202ENST00000577625 C19orf24Q9BVV8 132 aa10.87□□□□□ -0.67
RNF43-202ENST00000577625 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.87□□□□□ -0.67
RNF43-202ENST00000577625 CENPVL3A0A0U1RRI6 287 aa10.87□□□□□ -0.67
RNF43-202ENST00000577625 NPFFO15130 113 aa10.87□□□□□ -0.67
RNF43-202ENST00000577625 FA2HQ7L5A8 372 aa10.87□□□□□ -0.67
RNF43-202ENST00000577625 NPIPB3Q92617 1050 aa10.87□□□□□ -0.67
RNF43-202ENST00000577625 SH2D7A6NKC9 451 aaPredicted RBP10.86□□□□□ -0.67
RNF43-202ENST00000577625 CNIH1O95406 144 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 KRTAP10-9P60411 292 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 KIR3DS1Q14943 382 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 LINC00173Q6ZV60 143 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 MBD6Q96DN6 1003 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 IGF2BP2-AS1Q96M15 143 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 TMEM167BQ9NRX6 74 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 MRPL36Q9P0J6 103 aaKnown RBP10.86□□□□□ -0.67
RNF43-202ENST00000577625 CELSR1Q9NYQ6 3014 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 IGKV1D-37A0A075B6S9 117 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 SERTM2A0A1B0GWG4 89 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 J3QR89 54 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 SPATA31B1PQ5VZV4 182 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 ATP5L2Q7Z4Y8 100 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 MTURNQ8N3F0 131 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 GRAMD2BQ96HH9 432 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 SPATA25Q9BR10 227 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 SELENOKQ9Y6D0 94 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 CSPG4Q6UVK1 2322 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 APCP25054 2843 aa10.86□□□□□ -0.67
RNF43-202ENST00000577625 TCRBV4S1A1TA0A5B7 111 aa10.85□□□□□ -0.67
RNF43-202ENST00000577625 ZNF207O43670 478 aaKnown RBP10.85□□□□□ -0.67
RNF43-202ENST00000577625 CA1P00915 261 aaPredicted RBP10.85□□□□□ -0.67
RNF43-202ENST00000577625 IGHV3-48P01763 117 aa10.85□□□□□ -0.67
RNF43-202ENST00000577625 FABP2P12104 132 aa10.85□□□□□ -0.67
RNF43-202ENST00000577625 TMEM116Q8NCL8 245 aa10.85□□□□□ -0.67
RNF43-202ENST00000577625 NUP35Q8NFH5 326 aa10.85□□□□□ -0.67
RNF43-202ENST00000577625 SLC25A33Q9BSK2 321 aa10.85□□□□□ -0.67
RNF43-202ENST00000577625 TSSC4Q9Y5U2 329 aaPredicted RBP10.85□□□□□ -0.67
RNF43-202ENST00000577625 MSMBP08118 114 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 SLC25A16P16260 332 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 LINC01545Q5VT33 79 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 ZNF562Q6V9R5 426 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 FAM231DQ6ZW35 169 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 DPF1Q92782 380 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 MRAP2Q96G30 205 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 HSPB8Q9UJY1 196 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 CREBBPQ92793 2442 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 A0A096LNT2 108 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 A0A1W2PRE2 83 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 FAM106CPP0CH98 169 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 RUSC1-AS1Q66K80 236 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 FOXI2Q6ZQN5 318 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 MIR17HGQ75NE6 70 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 NHLRC2Q8NBF2 726 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 CR1P17927 2039 aa10.84□□□□□ -0.67
RNF43-202ENST00000577625 IGHV3OR16-10A0A075B7F0 116 aa10.83□□□□□ -0.68
RNF43-202ENST00000577625 TRAV40A0A0B4J280 105 aa10.83□□□□□ -0.68
RNF43-202ENST00000577625 IGHV1-69DA0A0B4J2H0 117 aa10.83□□□□□ -0.68
RNF43-202ENST00000577625 NCBP2LA6PVI3 153 aaKnown RBP10.83□□□□□ -0.68
RNF43-202ENST00000577625 IGHV1-69P01742 117 aa10.83□□□□□ -0.68
RNF43-202ENST00000577625 PLA2G2AP14555 144 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms