RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 MED23Q9ULK4 1368 aa3.31□□□□□ -1.88
CALCOCO2-226ENST00000575461 C9JAW5 83 aa3.31□□□□□ -1.88
CALCOCO2-226ENST00000575461 CXCL8P10145 99 aa3.31□□□□□ -1.88
CALCOCO2-226ENST00000575461 CRYGSP22914 178 aa3.31□□□□□ -1.88
CALCOCO2-226ENST00000575461 TCTE3Q8IZS6 198 aa3.31□□□□□ -1.88
CALCOCO2-226ENST00000575461 C15orf53Q8NAA6 179 aa3.31□□□□□ -1.88
CALCOCO2-226ENST00000575461 OR51A4Q8NGJ6 313 aa3.31□□□□□ -1.88
CALCOCO2-226ENST00000575461 BRK1Q8WUW1 75 aa3.31□□□□□ -1.88
CALCOCO2-226ENST00000575461 GGACTQ9BVM4 153 aa3.31□□□□□ -1.88
CALCOCO2-226ENST00000575461 HIGD1AQ9Y241 93 aa3.31□□□□□ -1.88
CALCOCO2-226ENST00000575461 MED12LQ86YW9 2145 aa3.31□□□□□ -1.88
CALCOCO2-226ENST00000575461 MYLKQ15746 1914 aa3.31□□□□□ -1.88
CALCOCO2-226ENST00000575461 CEP152O94986 1710 aa3.3□□□□□ -1.88
CALCOCO2-226ENST00000575461 CD2P06729 351 aa3.3□□□□□ -1.88
CALCOCO2-226ENST00000575461 MORN2Q502X0 79 aa3.3□□□□□ -1.88
CALCOCO2-226ENST00000575461 UNQ6190/PRO20217Q6UXQ8 127 aa3.3□□□□□ -1.88
CALCOCO2-226ENST00000575461 OR5AS1Q8N127 324 aa3.3□□□□□ -1.88
CALCOCO2-226ENST00000575461 SNURFQ9Y675 71 aa3.3□□□□□ -1.88
CALCOCO2-226ENST00000575461 CR1P17927 2039 aa3.29□□□□□ -1.88
CALCOCO2-226ENST00000575461 FER1L6Q2WGJ9 1857 aa3.29□□□□□ -1.88
CALCOCO2-226ENST00000575461 M0QZK8 103 aa3.29□□□□□ -1.88
CALCOCO2-226ENST00000575461 NIT2Q9NQR4 276 aa3.29□□□□□ -1.88
CALCOCO2-226ENST00000575461 OR2H2O95918 312 aa3.28□□□□□ -1.88
CALCOCO2-226ENST00000575461 SAA1P0DJI8 122 aaPredicted RBP3.28□□□□□ -1.88
CALCOCO2-226ENST00000575461 FOXA3P55318 350 aaPredicted RBP3.28□□□□□ -1.88
CALCOCO2-226ENST00000575461 CKS1BP61024 79 aa3.28□□□□□ -1.88
CALCOCO2-226ENST00000575461 LSM3P62310 102 aaKnown RBP3.28□□□□□ -1.88
CALCOCO2-226ENST00000575461 Q5XG85 94 aa3.28□□□□□ -1.88
CALCOCO2-226ENST00000575461 KRTAP26-1Q6PEX3 210 aa3.28□□□□□ -1.88
CALCOCO2-226ENST00000575461 PATE1Q8WXA2 126 aa3.28□□□□□ -1.88
CALCOCO2-226ENST00000575461 TMEM138Q9NPI0 162 aa3.28□□□□□ -1.88
CALCOCO2-226ENST00000575461 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.27□□□□□ -1.89
CALCOCO2-226ENST00000575461 CCL16O15467 120 aa3.27□□□□□ -1.89
CALCOCO2-226ENST00000575461 FAM74A1Q5RGS3 127 aa3.27□□□□□ -1.89
CALCOCO2-226ENST00000575461 Q8TAT8 98 aa3.27□□□□□ -1.89
CALCOCO2-226ENST00000575461 BORCS5Q969J3 196 aa3.27□□□□□ -1.89
CALCOCO2-226ENST00000575461 ORMDL1Q9P0S3 153 aa3.27□□□□□ -1.89
CALCOCO2-226ENST00000575461 FAM135BQ49AJ0 1406 aa3.27□□□□□ -1.89
CALCOCO2-226ENST00000575461 IGKV3D-7A0A0C4DH55 119 aa3.26□□□□□ -1.89
CALCOCO2-226ENST00000575461 IGKV3OR2-268A0A0C4DH90 116 aa3.26□□□□□ -1.89
CALCOCO2-226ENST00000575461 HCRTO43612 131 aa3.26□□□□□ -1.89
CALCOCO2-226ENST00000575461 TRACP01848 142 aa3.26□□□□□ -1.89
CALCOCO2-226ENST00000575461 PAEPP09466 180 aa3.26□□□□□ -1.89
CALCOCO2-226ENST00000575461 HSPB8Q9UJY1 196 aa3.26□□□□□ -1.89
CALCOCO2-226ENST00000575461 ALPK2Q86TB3 2170 aa3.25□□□□□ -1.89
CALCOCO2-226ENST00000575461 DSPPQ9NZW4 1301 aa3.25□□□□□ -1.89
CALCOCO2-226ENST00000575461 C5orf67F2Z3F1 127 aa3.25□□□□□ -1.89
CALCOCO2-226ENST00000575461 LINC00052Q96N35 136 aa3.25□□□□□ -1.89
CALCOCO2-226ENST00000575461 RFX7Q2KHR2 1363 aa3.25□□□□□ -1.89
CALCOCO2-226ENST00000575461 A0A1B0GW64 132 aa3.24□□□□□ -1.89
CALCOCO2-226ENST00000575461 UQCRQO14949 82 aa3.24□□□□□ -1.89
CALCOCO2-226ENST00000575461 PSPHP78330 225 aa3.24□□□□□ -1.89
CALCOCO2-226ENST00000575461 OR5AK2Q8NH90 309 aa3.24□□□□□ -1.89
CALCOCO2-226ENST00000575461 CLEC2BQ92478 149 aa3.24□□□□□ -1.89
CALCOCO2-226ENST00000575461 PSMF1Q92530 271 aa3.24□□□□□ -1.89
CALCOCO2-226ENST00000575461 MAGOHBQ96A72 148 aaKnown RBP3.24□□□□□ -1.89
CALCOCO2-226ENST00000575461 CST11Q9H112 138 aa3.24□□□□□ -1.89
CALCOCO2-226ENST00000575461 LAMB4A4D0S4 1761 aa3.23□□□□□ -1.89
CALCOCO2-226ENST00000575461 LOC107986453A0A1B0GWG9 222 aa3.23□□□□□ -1.89
CALCOCO2-226ENST00000575461 HBDP02042 147 aa3.23□□□□□ -1.89
CALCOCO2-226ENST00000575461 HMGN1P05114 100 aa3.23□□□□□ -1.89
CALCOCO2-226ENST00000575461 DEFB115Q30KQ5 88 aa3.23□□□□□ -1.89
CALCOCO2-226ENST00000575461 HAGHLQ6PII5 290 aaPredicted RBP3.23□□□□□ -1.89
CALCOCO2-226ENST00000575461 TEN1Q86WV5 123 aa3.23□□□□□ -1.89
CALCOCO2-226ENST00000575461 GKN2Q86XP6 184 aa3.23□□□□□ -1.89
CALCOCO2-226ENST00000575461 OR10AG1Q8NH19 301 aa3.23□□□□□ -1.89
CALCOCO2-226ENST00000575461 CDC42SE1Q9NRR8 79 aa3.23□□□□□ -1.89
CALCOCO2-226ENST00000575461 CALML5Q9NZT1 146 aa3.23□□□□□ -1.89
CALCOCO2-226ENST00000575461 COL4A1P02462 1669 aa3.23□□□□□ -1.89
CALCOCO2-226ENST00000575461 ZCCHC6Q5VYS8 1495 aaKnown RBP3.22□□□□□ -1.89
CALCOCO2-226ENST00000575461 C9orf170A2RU37 121 aa3.22□□□□□ -1.89
CALCOCO2-226ENST00000575461 AP1S3Q96PC3 154 aa3.22□□□□□ -1.89
CALCOCO2-226ENST00000575461 CEP192Q8TEP8 1941 aa3.22□□□□□ -1.89
CALCOCO2-226ENST00000575461 SCN3AQ9NY46 2000 aa3.21□□□□□ -1.9
CALCOCO2-226ENST00000575461 LAMB2P55268 1798 aa3.21□□□□□ -1.9
CALCOCO2-226ENST00000575461 LOC110117498A0A087WWA1 95 aa3.21□□□□□ -1.9
CALCOCO2-226ENST00000575461 M0R2N4 97 aa3.21□□□□□ -1.9
CALCOCO2-226ENST00000575461 MT-ND4LP03901 98 aa3.21□□□□□ -1.9
CALCOCO2-226ENST00000575461 DIAPH2-AS1Q14236 149 aa3.21□□□□□ -1.9
CALCOCO2-226ENST00000575461 HSD17B12Q53GQ0 312 aa3.21□□□□□ -1.9
CALCOCO2-226ENST00000575461 DEFB119Q8N690 84 aa3.21□□□□□ -1.9
CALCOCO2-226ENST00000575461 OR4S1Q8NGB4 309 aa3.21□□□□□ -1.9
CALCOCO2-226ENST00000575461 MGAMO43451 1857 aa3.21□□□□□ -1.9
CALCOCO2-226ENST00000575461 COL24A1Q17RW2 1714 aa3.21□□□□□ -1.9
CALCOCO2-226ENST00000575461 IGKV2-40A0A087WW87 121 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-226ENST00000575461 TRBV6-4A0A1B0GX49 114 aa3.2□□□□□ -1.9
CALCOCO2-226ENST00000575461 F8W1H4 67 aa3.2□□□□□ -1.9
CALCOCO2-226ENST00000575461 IGKV2D-40P01614 121 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-226ENST00000575461 COX7CP15954 63 aa3.2□□□□□ -1.9
CALCOCO2-226ENST00000575461 MPV17LQ2QL34 196 aa3.2□□□□□ -1.9
CALCOCO2-226ENST00000575461 SMIM21Q3B7S5 101 aa3.2□□□□□ -1.9
CALCOCO2-226ENST00000575461 TMEM244Q5VVB8 128 aa3.2□□□□□ -1.9
CALCOCO2-226ENST00000575461 GLIPR1L1Q6UWM5 242 aa3.2□□□□□ -1.9
CALCOCO2-226ENST00000575461 LINC00269Q8N2A0 174 aa3.2□□□□□ -1.9
CALCOCO2-226ENST00000575461 DIDO1Q9BTC0 2240 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-226ENST00000575461 IGKV3-7A0A075B6H7 116 aa3.19□□□□□ -1.9
CALCOCO2-226ENST00000575461 INE1O15225 51 aa3.19□□□□□ -1.9
CALCOCO2-226ENST00000575461 IL9P15248 144 aa3.19□□□□□ -1.9
CALCOCO2-226ENST00000575461 FKBP11Q9NYL4 201 aa3.19□□□□□ -1.9
CALCOCO2-226ENST00000575461 MYOFQ9NZM1 2061 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms