RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 B9D2Q9BPU9 175 aa10.72□□□□□ -0.69
NPLOC4-218ENST00000574964 PPP1R14DQ9NXH3 145 aa10.72□□□□□ -0.69
NPLOC4-218ENST00000574964 HLA-DRB4X5D2U9 266 aa10.72□□□□□ -0.69
NPLOC4-218ENST00000574964 ZNF705FA8MVS1 300 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-218ENST00000574964 H3BMM0 161 aa10.71□□□□□ -0.69
NPLOC4-218ENST00000574964 IGKV3-20P01619 116 aa10.71□□□□□ -0.69
NPLOC4-218ENST00000574964 H2AFB1P0C5Y9 115 aa10.71□□□□□ -0.69
NPLOC4-218ENST00000574964 CSN1S1P47710 185 aa10.71□□□□□ -0.69
NPLOC4-218ENST00000574964 SULT1A2P50226 295 aa10.71□□□□□ -0.69
NPLOC4-218ENST00000574964 HIST1H1AQ02539 215 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-218ENST00000574964 GDF5OSQ5U4N7 250 aa10.71□□□□□ -0.69
NPLOC4-218ENST00000574964 FBN3Q75N90 2809 aa10.71□□□□□ -0.69
NPLOC4-218ENST00000574964 CMTM2Q8TAZ6 248 aa10.71□□□□□ -0.69
NPLOC4-218ENST00000574964 MRPL53Q96EL3 112 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-218ENST00000574964 Q9H3A6 140 aa10.71□□□□□ -0.69
NPLOC4-218ENST00000574964 A0A0J9YX75 114 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 A0A1B0GV50 99 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 PGPA6NDG6 321 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 TEX46H3BTG2 121 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 M0R3E3 92 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 ZNF705DP0CH99 300 aaPredicted RBP10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 ZNF705BP0CI00 300 aaPredicted RBP10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 PRB4P10163 310 aaPredicted RBP10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 NUTF2P61970 127 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 HAGHQ16775 308 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 ALKAL2Q6UX46 152 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 LINC00322Q6ZN03 302 aaPredicted RBP10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 TRPT1Q86TN4 253 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 SBSPONQ8IVN8 264 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 OR8A1Q8NGG7 326 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 OR10J6PQ8NGY7 276 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 MBD3L1Q8WWY6 194 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 CSTL1Q9H114 145 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 TMPRSS5Q9H3S3 457 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 OTORQ9NRC9 128 aa10.7□□□□□ -0.7
NPLOC4-218ENST00000574964 KIR2DL5BA0A0G2JN68 375 aa10.69□□□□□ -0.7
NPLOC4-218ENST00000574964 KIR2DL5BA0A0G2JPC4 375 aa10.69□□□□□ -0.7
NPLOC4-218ENST00000574964 MORN3Q6PF18 240 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-218ENST00000574964 KIR2DL5AQ8N109 375 aa10.69□□□□□ -0.7
NPLOC4-218ENST00000574964 KIR2DL5BQ8NHK3 375 aa10.69□□□□□ -0.7
NPLOC4-218ENST00000574964 RXFP4Q8TDU9 374 aa10.69□□□□□ -0.7
NPLOC4-218ENST00000574964 RPH3ALQ9UNE2 315 aa10.69□□□□□ -0.7
NPLOC4-218ENST00000574964 ZNF705EA8MWA4 302 aaPredicted RBP10.68□□□□□ -0.7
NPLOC4-218ENST00000574964 PRAC2D3DTV9 90 aa10.68□□□□□ -0.7
NPLOC4-218ENST00000574964 UBE2CO00762 179 aa10.68□□□□□ -0.7
NPLOC4-218ENST00000574964 CA1P00915 261 aaPredicted RBP10.68□□□□□ -0.7
NPLOC4-218ENST00000574964 HBE1P02100 147 aa10.68□□□□□ -0.7
NPLOC4-218ENST00000574964 CNN1P51911 297 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-218ENST00000574964 UBE2G2P60604 165 aa10.68□□□□□ -0.7
NPLOC4-218ENST00000574964 SUN5Q8TC36 379 aa10.68□□□□□ -0.7
NPLOC4-218ENST00000574964 ZMAT4Q9H898 229 aa10.68□□□□□ -0.7
NPLOC4-218ENST00000574964 SLC25A5P05141 298 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-218ENST00000574964 A0A1W2PRE2 83 aa10.66□□□□□ -0.7
NPLOC4-218ENST00000574964 NHLRC4P0CG21 123 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-218ENST00000574964 PPT1P50897 306 aa10.66□□□□□ -0.7
NPLOC4-218ENST00000574964 FXYD7P58549 80 aa10.66□□□□□ -0.7
NPLOC4-218ENST00000574964 SUMO1P63165 101 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-218ENST00000574964 BLOC1S1P78537 153 aa10.66□□□□□ -0.7
NPLOC4-218ENST00000574964 CLUHP3Q96NS8 147 aa10.66□□□□□ -0.7
NPLOC4-218ENST00000574964 SPATA25Q9BR10 227 aa10.66□□□□□ -0.7
NPLOC4-218ENST00000574964 C1QTNF4Q9BXJ3 329 aa10.66□□□□□ -0.7
NPLOC4-218ENST00000574964 IFNA7P01567 189 aa10.65□□□□□ -0.7
NPLOC4-218ENST00000574964 DEFB135Q30KP9 77 aa10.65□□□□□ -0.7
NPLOC4-218ENST00000574964 TMEM78Q5T7P6 136 aa10.65□□□□□ -0.7
NPLOC4-218ENST00000574964 CST9LP1Q5W188 147 aa10.65□□□□□ -0.7
NPLOC4-218ENST00000574964 C5orf17Q8NAS9 161 aa10.65□□□□□ -0.7
NPLOC4-218ENST00000574964 NKX6-2Q9C056 277 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-218ENST00000574964 SLC35B3Q9H1N7 401 aa10.65□□□□□ -0.7
NPLOC4-218ENST00000574964 XCL2Q9UBD3 114 aa10.65□□□□□ -0.7
NPLOC4-218ENST00000574964 IGKV2-40A0A087WW87 121 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-218ENST00000574964 DIRC3C9JPN6 131 aa10.64□□□□□ -0.71
NPLOC4-218ENST00000574964 IGKV2D-40P01614 121 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-218ENST00000574964 ERCC8Q13216 396 aa10.64□□□□□ -0.71
NPLOC4-218ENST00000574964 Q6ZWC4 215 aa10.64□□□□□ -0.71
NPLOC4-218ENST00000574964 LINC00477Q96M19 166 aa10.64□□□□□ -0.71
NPLOC4-218ENST00000574964 RCHY1Q96PM5 261 aa10.64□□□□□ -0.71
NPLOC4-218ENST00000574964 MEGF8Q7Z7M0 2845 aa10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 TRAV1-1A0A0B4J248 108 aa10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 FAM74A7A6NL05 159 aa10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 A8MTW9 85 aa10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 NPIPB6E9PJ23 425 aa10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 K7EQM0 130 aa10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 PAGE4O60829 102 aa10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 AMBPP02760 352 aa10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 TSPOP30536 169 aa10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 GNG5P63218 68 aa10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 SPINK13Q1W4C9 94 aa10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 GOLT1AQ6ZVE7 132 aa10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 TM2D3Q9BRN9 247 aa10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 YTHDF2Q9Y5A9 579 aaKnown RBP10.63□□□□□ -0.71
NPLOC4-218ENST00000574964 RBAKDNA6NC62 111 aa10.62□□□□□ -0.71
NPLOC4-218ENST00000574964 GGTLC3B5MD39 225 aa10.62□□□□□ -0.71
NPLOC4-218ENST00000574964 SPRY2O43597 315 aa10.62□□□□□ -0.71
NPLOC4-218ENST00000574964 IFNA1P01562 189 aa10.62□□□□□ -0.71
NPLOC4-218ENST00000574964 LEPP41159 167 aa10.62□□□□□ -0.71
NPLOC4-218ENST00000574964 TEX261Q6UWH6 196 aa10.62□□□□□ -0.71
NPLOC4-218ENST00000574964 AMTNQ6UX39 209 aa10.62□□□□□ -0.71
NPLOC4-218ENST00000574964 C9orf47Q6ZRZ4 202 aa10.62□□□□□ -0.71
NPLOC4-218ENST00000574964 ARL6IP6Q8N6S5 226 aa10.62□□□□□ -0.71
NPLOC4-218ENST00000574964 VGLL1Q99990 258 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms