RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 LGALS9CQ6DKI2 356 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 MRPL20Q9BYC9 149 aaKnown RBP12.91□□□□□ -0.34
LINC00554-201ENST00000564841 GFRA4Q9GZZ7 299 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 CGB3P0DN86 165 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 CGB7P0DN87 165 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 PHLDA1Q8WV24 401 aaPredicted RBP12.91□□□□□ -0.34
LINC00554-201ENST00000564841 IFI27L1Q96BM0 104 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 TPSG1Q9NRR2 321 aa12.91□□□□□ -0.34
LINC00554-201ENST00000564841 IGLV1-44P01699 117 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 CACNG8Q8WXS5 425 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 KBTBD11-OT1A0A1B0GTJ5 212 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 GAS8-AS1O95177 125 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 SCGB1A1P11684 91 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 CRIP1P50238 77 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 POU2AF1Q16633 256 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 GTSCR1Q86UQ5 136 aa12.9□□□□□ -0.34
LINC00554-201ENST00000564841 SRRM5B3KS81 715 aa12.89□□□□□ -0.35
LINC00554-201ENST00000564841 NDUFS7O75251 213 aa12.89□□□□□ -0.35
LINC00554-201ENST00000564841 PRELID3AQ96N28 172 aa12.89□□□□□ -0.35
LINC00554-201ENST00000564841 CHAC1Q9BUX1 264 aa12.89□□□□□ -0.35
LINC00554-201ENST00000564841 GP9P14770 177 aa12.89□□□□□ -0.35
LINC00554-201ENST00000564841 FAM222BQ8WU58 562 aa12.89□□□□□ -0.35
LINC00554-201ENST00000564841 GEMIN7Q9H840 131 aaKnown RBP12.89□□□□□ -0.35
LINC00554-201ENST00000564841 SLC25A17O43808 307 aa12.88□□□□□ -0.35
LINC00554-201ENST00000564841 RITA1Q96K30 269 aa12.88□□□□□ -0.35
LINC00554-201ENST00000564841 CACNA1BQ00975 2339 aa12.88□□□□□ -0.35
LINC00554-201ENST00000564841 RIGQ13278 110 aa12.88□□□□□ -0.35
LINC00554-201ENST00000564841 ZFYVE26Q68DK2 2539 aa12.88□□□□□ -0.35
LINC00554-201ENST00000564841 CCL3L1P16619 93 aa12.88□□□□□ -0.35
LINC00554-201ENST00000564841 SLC25A48Q6ZT89 311 aaKnown RBP12.88□□□□□ -0.35
LINC00554-201ENST00000564841 ACACBO00763 2458 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 SFTA2Q6UW10 78 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 DPF1Q92782 380 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 SPATA25Q9BR10 227 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 DSCAML1Q8TD84 2053 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 IGHV3-72A0A0B4J1Y9 119 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 WI2-2373I1.2A0A1W2PRP0 233 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 K7ENP7 123 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 SIVA1O15304 175 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 NPYP01303 97 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 C8orf49Q96NF6 230 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 SSUH2Q9Y2M2 353 aa12.87□□□□□ -0.35
LINC00554-201ENST00000564841 TRBV25-1A0A075B6N4 114 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 LYZL1Q6UWQ5 148 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 PPP1R35Q8TAP8 253 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 IGLL5B9A064 214 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 HBDP02042 147 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 CD40P25942 277 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 FCER1GP30273 86 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 FOXI2Q6ZQN5 318 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 FAM169BQ8N8A8 192 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 RPUSD1Q9UJJ7 312 aaKnown RBP12.86□□□□□ -0.35
LINC00554-201ENST00000564841 HIVEP3Q5T1R4 2406 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 M0R3E3 92 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 LYZP61626 148 aa12.86□□□□□ -0.35
LINC00554-201ENST00000564841 ITPR1Q14643 2758 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 MC5RP33032 325 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 MRPL51Q4U2R6 128 aaKnown RBP12.85□□□□□ -0.35
LINC00554-201ENST00000564841 ZNF479Q96JC4 524 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 PKD1L2Q7Z442 2459 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 TNFRSF1AP19438 455 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 MAPKAPK5-AS1Q8N8E1 139 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 HHLA3Q9XRX5 114 aa12.85□□□□□ -0.35
LINC00554-201ENST00000564841 A0A1W2PPI3 338 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 GLRXP35754 106 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 MBNL2Q5VZF2 373 aaKnown RBP12.84□□□□□ -0.35
LINC00554-201ENST00000564841 ZNF562Q6V9R5 426 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 IGFBPL1Q8WX77 278 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 CACNA1AO00555 2505 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 FAM90A27PA6NNH2 459 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 E9PLD3 99 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 TNFAIP6P98066 277 aaPredicted RBP12.84□□□□□ -0.35
LINC00554-201ENST00000564841 BSPH1Q075Z2 132 aa12.84□□□□□ -0.35
LINC00554-201ENST00000564841 THAP8Q8NA92 274 aa12.83□□□□□ -0.35
LINC00554-201ENST00000564841 PRSS1P07477 247 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 PAX8Q06710 450 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.83□□□□□ -0.36
LINC00554-201ENST00000564841 SPG11Q96JI7 2443 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 A0A1B0GWB2 263 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 F8W1H4 67 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 MT-ATP8P03928 68 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 GLMPQ8WWB7 406 aa12.83□□□□□ -0.36
LINC00554-201ENST00000564841 LINC01548A6NM66 108 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 J3QR89 54 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 FAM104BQ5XKR9 115 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 CEND1Q8N111 149 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 ORMDL3Q8N138 153 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 MSRB1Q9NZV6 116 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 EVI2AP22794 236 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 FHL3Q13643 280 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 SYT8Q8NBV8 401 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 MRAP2Q96G30 205 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 MSRB2Q9Y3D2 182 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 WNK2Q9Y3S1 2297 aa12.82□□□□□ -0.36
LINC00554-201ENST00000564841 CKS2P33552 79 aa12.81□□□□□ -0.36
LINC00554-201ENST00000564841 GAGE13Q4V321 117 aa12.81□□□□□ -0.36
LINC00554-201ENST00000564841 ZC2HC1BQ5TFG8 222 aa12.81□□□□□ -0.36
LINC00554-201ENST00000564841 SS18L2Q9UHA2 77 aa12.81□□□□□ -0.36
LINC00554-201ENST00000564841 IGHV1-46P01743 117 aa12.81□□□□□ -0.36
LINC00554-201ENST00000564841 GATA1P15976 413 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms