RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 SARNPP82979 210 aaKnown RBP0.87□□□□□ -2.27
LINC00557-201ENST00000563184 SAMD13Q5VXD3 122 aa0.87□□□□□ -2.27
LINC00557-201ENST00000563184 POP5Q969H6 163 aaKnown RBP0.87□□□□□ -2.27
LINC00557-201ENST00000563184 EFCAB11Q9BUY7 163 aa0.87□□□□□ -2.27
LINC00557-201ENST00000563184 GGACTQ9BVM4 153 aa0.87□□□□□ -2.27
LINC00557-201ENST00000563184 NDUFAF1Q9Y375 327 aa0.87□□□□□ -2.27
LINC00557-201ENST00000563184 CEP164Q9UPV0 1460 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 PHRF1Q9P1Y6 1649 aaKnown RBP0.86□□□□□ -2.27
LINC00557-201ENST00000563184 DCAF1Q9Y4B6 1507 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 C17orf112F2Z3M2 114 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 KPNA4O00629 521 aaPredicted RBP0.86□□□□□ -2.27
LINC00557-201ENST00000563184 CST7O76096 145 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 TRGC2P03986 189 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 CXCL1P09341 107 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 OR10J4P0C629 311 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 SRP9P49458 86 aaKnown RBP0.86□□□□□ -2.27
LINC00557-201ENST00000563184 ARPC4P59998 168 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 LSM3P62310 102 aaKnown RBP0.86□□□□□ -2.27
LINC00557-201ENST00000563184 CDK6Q00534 326 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 EIF3IQ13347 325 aaKnown RBP0.86□□□□□ -2.27
LINC00557-201ENST00000563184 LTC4SQ16873 150 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 FKBP1CQ5VVH2 108 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 PLPP5Q8NEB5 264 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 OR5D16Q8NGK9 328 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 OR4K15Q8NH41 348 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 THEM6Q8WUY1 208 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 RAB37Q96AX2 223 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 ZNF714Q96N38 554 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 MCEEQ96PE7 176 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 GPX7Q96SL4 187 aaPredicted RBP0.86□□□□□ -2.27
LINC00557-201ENST00000563184 LXNQ9BS40 222 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 LRTM1Q9HBL6 345 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 SYNMO15061 1565 aa0.86□□□□□ -2.27
LINC00557-201ENST00000563184 BAZ1AQ9NRL2 1556 aaPredicted RBP0.86□□□□□ -2.27
LINC00557-201ENST00000563184 RFX7Q2KHR2 1363 aa0.85□□□□□ -2.27
LINC00557-201ENST00000563184 LOC105371267A0A1B0GV96 52 aa0.85□□□□□ -2.27
LINC00557-201ENST00000563184 M0R233 179 aa0.85□□□□□ -2.27
LINC00557-201ENST00000563184 CSN2P05814 226 aa0.85□□□□□ -2.27
LINC00557-201ENST00000563184 TMBIM6P55061 237 aa0.85□□□□□ -2.27
LINC00557-201ENST00000563184 ARPP19P56211 112 aa0.85□□□□□ -2.27
LINC00557-201ENST00000563184 MRPS36P82909 103 aaKnown RBP0.85□□□□□ -2.27
LINC00557-201ENST00000563184 ERCC6L2Q5T890 1561 aa0.85□□□□□ -2.27
LINC00557-201ENST00000563184 PRR15Q8IV56 129 aa0.85□□□□□ -2.27
LINC00557-201ENST00000563184 GRPEL2Q8TAA5 225 aa0.85□□□□□ -2.27
LINC00557-201ENST00000563184 ZNF431Q8TF32 576 aaPredicted RBP0.85□□□□□ -2.27
LINC00557-201ENST00000563184 MUCL1Q96DR8 90 aa0.85□□□□□ -2.27
LINC00557-201ENST00000563184 OR2H1Q9GZK4 316 aa0.85□□□□□ -2.27
LINC00557-201ENST00000563184 CACYBPQ9HB71 228 aaKnown RBP0.85□□□□□ -2.27
LINC00557-201ENST00000563184 NAT8BQ9UHF3 227 aa0.85□□□□□ -2.27
LINC00557-201ENST00000563184 OR52A1Q9UKL2 312 aa0.85□□□□□ -2.27
LINC00557-201ENST00000563184 BCL9O00512 1426 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 A0A1B0GX51 115 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 F8W1H4 67 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 M0QZK8 103 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 DEGS1O15121 323 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 LYRM1O43325 122 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 HIST1H2BKO60814 126 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 HMGN1P05114 100 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 HIST1H2BJP06899 126 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 CXCL8P10145 99 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 RPL35P42766 123 aaKnown RBP0.84□□□□□ -2.27
LINC00557-201ENST00000563184 RAB5CP51148 216 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 HBBP68871 147 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 SMCO1Q147U7 214 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 TMEM229BQ8NBD8 167 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 MAFIPQ8WZ33 124 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 LZICQ8WZA0 190 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 MAGOHBQ96A72 148 aaKnown RBP0.84□□□□□ -2.27
LINC00557-201ENST00000563184 CHCHD1Q96BP2 118 aaKnown RBP0.84□□□□□ -2.27
LINC00557-201ENST00000563184 BORCS8Q96FH0 119 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 RMND5BQ96G75 393 aaPredicted RBP0.84□□□□□ -2.27
LINC00557-201ENST00000563184 ZC2HC1AQ96GY0 325 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 PAIP2BQ9ULR5 123 aaKnown RBP0.84□□□□□ -2.27
LINC00557-201ENST00000563184 ASB4Q9Y574 426 aa0.84□□□□□ -2.27
LINC00557-201ENST00000563184 MRC2Q9UBG0 1479 aa0.84□□□□□ -2.28
LINC00557-201ENST00000563184 MGAMO43451 1857 aa0.84□□□□□ -2.28
LINC00557-201ENST00000563184 HMGXB3Q12766 1538 aa0.84□□□□□ -2.28
LINC00557-201ENST00000563184 MYLKQ15746 1914 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 LAMC3Q9Y6N6 1575 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 FHAD1B1AJZ9 1412 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 TRBV7-6A0A0J9YX20 115 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 TRDV1A0A1B0GX56 115 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 ODAMA1E959 279 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 H3BMG7 143 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 K7ERJ3 54 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 RER1O15258 196 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 SCTP09683 121 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 S100A11P31949 105 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 SDC2P34741 201 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 POLR2HP52434 150 aaKnown RBP0.83□□□□□ -2.28
LINC00557-201ENST00000563184 KLRD1Q13241 179 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 MSMO1Q15800 293 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 CCDC153Q494R4 210 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 HAGHLQ6PII5 290 aaPredicted RBP0.83□□□□□ -2.28
LINC00557-201ENST00000563184 OR4B1Q8NGF8 309 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 CCDC115Q96NT0 180 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 OTORQ9NRC9 128 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 JPT1Q9UK76 154 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 TNFSF18Q9UNG2 199 aa0.83□□□□□ -2.28
LINC00557-201ENST00000563184 MED31Q9Y3C7 131 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms