RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 C16orf92Q96LL3 132 aa6.52□□□□□ -1.37
TRAF3-209ENST00000560463 DUX3Q96PT4 197 aa6.52□□□□□ -1.37
TRAF3-209ENST00000560463 CITED1Q99966 193 aa6.52□□□□□ -1.37
TRAF3-209ENST00000560463 TRAV2A0A0B4J234 112 aa6.51□□□□□ -1.37
TRAF3-209ENST00000560463 TRBV6-1A0A0K0K1D8 114 aa6.51□□□□□ -1.37
TRAF3-209ENST00000560463 RBAKDNA6NC62 111 aa6.51□□□□□ -1.37
TRAF3-209ENST00000560463 DIRC3C9JPN6 131 aa6.51□□□□□ -1.37
TRAF3-209ENST00000560463 CSN3P07498 182 aa6.51□□□□□ -1.37
TRAF3-209ENST00000560463 ID1P41134 155 aa6.51□□□□□ -1.37
TRAF3-209ENST00000560463 GNG4P50150 75 aa6.51□□□□□ -1.37
TRAF3-209ENST00000560463 PSG3Q16557 428 aa6.51□□□□□ -1.37
TRAF3-209ENST00000560463 GUCA2BQ16661 112 aa6.51□□□□□ -1.37
TRAF3-209ENST00000560463 TMEM183BQ1AE95 376 aa6.51□□□□□ -1.37
TRAF3-209ENST00000560463 TMEM75Q8N9X5 138 aa6.51□□□□□ -1.37
TRAF3-209ENST00000560463 CLRN3Q8NCR9 226 aa6.51□□□□□ -1.37
TRAF3-209ENST00000560463 DERL1Q9BUN8 251 aa6.51□□□□□ -1.37
TRAF3-209ENST00000560463 TRAV25A0A0B4J276 109 aa6.5□□□□□ -1.37
TRAF3-209ENST00000560463 M0R036 132 aa6.5□□□□□ -1.37
TRAF3-209ENST00000560463 SOCS3O14543 225 aa6.5□□□□□ -1.37
TRAF3-209ENST00000560463 PF4P02776 101 aa6.5□□□□□ -1.37
TRAF3-209ENST00000560463 EDN2P20800 178 aa6.5□□□□□ -1.37
TRAF3-209ENST00000560463 RPL23P62829 140 aaKnown RBP6.5□□□□□ -1.37
TRAF3-209ENST00000560463 GNG5P63218 68 aa6.5□□□□□ -1.37
TRAF3-209ENST00000560463 RHEBQ15382 184 aa6.5□□□□□ -1.37
TRAF3-209ENST00000560463 HIST2H2BDQ6DRA6 164 aa6.5□□□□□ -1.37
TRAF3-209ENST00000560463 LCN12Q6JVE5 192 aa6.5□□□□□ -1.37
TRAF3-209ENST00000560463 ADAMTSL5Q6ZMM2 481 aa6.5□□□□□ -1.37
TRAF3-209ENST00000560463 RBPMS2Q6ZRY4 209 aaKnown RBP6.5□□□□□ -1.37
TRAF3-209ENST00000560463 DCANP1Q8TF63 244 aa6.5□□□□□ -1.37
TRAF3-209ENST00000560463 MS4A6AQ9H2W1 248 aa6.5□□□□□ -1.37
TRAF3-209ENST00000560463 RPH3ALQ9UNE2 315 aa6.5□□□□□ -1.37
TRAF3-209ENST00000560463 STAB1Q9NY15 2570 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 TRBV20OR9-2A0A075B6H5 130 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 A0A087WWC5 75 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 TRAV8-2A0A0B4J237 113 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 K7EQG2 157 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 M0R3E3 92 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 DNASE2O00115 360 aaPredicted RBP6.49□□□□□ -1.37
TRAF3-209ENST00000560463 TSPAN4O14817 238 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 SNRPD3P62318 126 aaKnown RBP6.49□□□□□ -1.37
TRAF3-209ENST00000560463 FLI1Q01543 452 aaPredicted RBP6.49□□□□□ -1.37
TRAF3-209ENST00000560463 ADIRFQ15847 76 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 DEFB114Q30KQ6 69 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 KRTAP24-1Q3LI83 254 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 CENPWQ5EE01 88 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 GOLT1AQ6ZVE7 132 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 LINC01551Q86U37 167 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 OR2K2Q8NGT1 345 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 OCC1Q8TAD7 63 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 DYNLRB2Q8TF09 96 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 TMEM158Q8WZ71 300 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 IGF2BP2-AS1Q96M15 143 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 BIN3Q9NQY0 253 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 ZFP30Q9Y2G7 519 aa6.49□□□□□ -1.37
TRAF3-209ENST00000560463 IGKV3-7A0A075B6H7 116 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 C7orf77A4D0Y5 90 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 LTAP01374 205 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 IGLV2-11P01706 119 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 MT-ND4LP03901 98 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 HLA-DMBP28068 263 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 SAPCD1Q5SSQ6 148 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 IGFL4Q6B9Z1 124 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 PRIMA1Q86XR5 153 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 BAGE2Q86Y30 109 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 RNF182Q8N6D2 247 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 LINC00482Q8N8I6 264 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 ANAPC16Q96DE5 110 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 LINC00479Q96M42 142 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 SPAG8Q99932 426 aaPredicted RBP6.48□□□□□ -1.37
TRAF3-209ENST00000560463 ZNF747Q9BV97 191 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 CTDSP1Q9GZU7 261 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 TMEM242Q9NWH2 141 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 PPP1R14DQ9NXH3 145 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 PSG8Q9UQ74 426 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 VWFP04275 2813 aa6.48□□□□□ -1.37
TRAF3-209ENST00000560463 TRAV34A0A0B4J273 112 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 OR4C46A6NHA9 309 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 ZNF705FA8MVS1 300 aaPredicted RBP6.47□□□□□ -1.37
TRAF3-209ENST00000560463 PPP1R2P9O14990 202 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 IGLV2-8P01709 118 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 INSL3P51460 131 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 TMEM78Q5T7P6 136 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 C9orf47Q6ZRZ4 202 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 Q86TA4 180 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 TMEM183AQ8IXX5 376 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 TMEM61Q8N0U2 210 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 GBGT1Q8N5D6 347 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 ZNF738Q8NE65 137 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 OR10J6PQ8NGY7 276 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 ISOC2Q96AB3 205 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 LINC00477Q96M19 166 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 NDFIP1Q9BT67 221 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 MLST8Q9BVC4 326 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 RPS10P5Q9NQ39 176 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 LENEPQ9Y5L5 61 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 COL6A5A8TX70 2615 aa6.47□□□□□ -1.37
TRAF3-209ENST00000560463 IGKV2-40A0A087WW87 121 aaPredicted RBP6.46□□□□□ -1.38
TRAF3-209ENST00000560463 TRBV7-9A0A0J9YWB2 115 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 CXorf65A6NEN9 183 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 PGPEP1LA6NFU8 196 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms