RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 PMCHL2Q9BQD1 86 aa13.75□□□□□ -0.21
PTPN21-208ENST00000556564 MRPS16Q9Y3D3 137 aaKnown RBP13.75□□□□□ -0.21
PTPN21-208ENST00000556564 WIPF3A6NGB9 483 aa13.74□□□□□ -0.21
PTPN21-208ENST00000556564 ORMDL2Q53FV1 153 aa13.74□□□□□ -0.21
PTPN21-208ENST00000556564 MRPL27Q9P0M9 148 aaKnown RBP13.74□□□□□ -0.21
PTPN21-208ENST00000556564 LYL1P12980 280 aa13.74□□□□□ -0.21
PTPN21-208ENST00000556564 DPH3P1Q9H4G8 78 aa13.74□□□□□ -0.21
PTPN21-208ENST00000556564 NXT2Q9NPJ8 142 aaKnown RBP13.74□□□□□ -0.21
PTPN21-208ENST00000556564 SERF1AO75920 110 aa13.74□□□□□ -0.21
PTPN21-208ENST00000556564 PPBPP02775 128 aa13.74□□□□□ -0.21
PTPN21-208ENST00000556564 TRAV1-1A0A0B4J248 108 aa13.73□□□□□ -0.21
PTPN21-208ENST00000556564 PDE6HQ13956 83 aa13.73□□□□□ -0.21
PTPN21-208ENST00000556564 PAX9P55771 341 aa13.73□□□□□ -0.21
PTPN21-208ENST00000556564 MSMPQ1L6U9 139 aa13.73□□□□□ -0.21
PTPN21-208ENST00000556564 BCL6BQ8N143 479 aaPredicted RBP13.73□□□□□ -0.21
PTPN21-208ENST00000556564 NCKAP5O14513 1909 aa13.73□□□□□ -0.21
PTPN21-208ENST00000556564 SMIM12Q96EX1 92 aa13.73□□□□□ -0.21
PTPN21-208ENST00000556564 LINC00614P0C842 121 aa13.73□□□□□ -0.21
PTPN21-208ENST00000556564 ZMAT4Q9H898 229 aa13.73□□□□□ -0.21
PTPN21-208ENST00000556564 HAPLN4Q86UW8 402 aa13.72□□□□□ -0.21
PTPN21-208ENST00000556564 UQCR10Q9UDW1 63 aa13.72□□□□□ -0.21
PTPN21-208ENST00000556564 LSM4Q9Y4Z0 139 aaKnown RBP13.72□□□□□ -0.21
PTPN21-208ENST00000556564 H3BRN7 92 aa13.72□□□□□ -0.21
PTPN21-208ENST00000556564 CHTOPQ9Y3Y2 248 aaKnown RBP13.72□□□□□ -0.21
PTPN21-208ENST00000556564 H3BUA1 57 aa13.72□□□□□ -0.21
PTPN21-208ENST00000556564 HBDP02042 147 aa13.72□□□□□ -0.21
PTPN21-208ENST00000556564 GAGE12BA1L429 117 aa13.72□□□□□ -0.21
PTPN21-208ENST00000556564 GAGE7O76087 117 aa13.72□□□□□ -0.21
PTPN21-208ENST00000556564 GAGE12FP0CL80 117 aa13.72□□□□□ -0.21
PTPN21-208ENST00000556564 GAGE12GP0CL81 117 aa13.72□□□□□ -0.21
PTPN21-208ENST00000556564 GAGE12IP0CL82 117 aa13.72□□□□□ -0.21
PTPN21-208ENST00000556564 TMEM190Q8WZ59 177 aa13.72□□□□□ -0.21
PTPN21-208ENST00000556564 LGALS1P09382 135 aaKnown RBP13.72□□□□□ -0.21
PTPN21-208ENST00000556564 LAGE3Q14657 143 aa13.72□□□□□ -0.21
PTPN21-208ENST00000556564 FOXL1Q12952 345 aa13.71□□□□□ -0.21
PTPN21-208ENST00000556564 LINC01551Q86U37 167 aa13.71□□□□□ -0.21
PTPN21-208ENST00000556564 GNB1LQ9BYB4 327 aa13.71□□□□□ -0.21
PTPN21-208ENST00000556564 CIDEAO60543 219 aa13.71□□□□□ -0.21
PTPN21-208ENST00000556564 AMBPP02760 352 aa13.71□□□□□ -0.21
PTPN21-208ENST00000556564 NIT1Q86X76 327 aa13.71□□□□□ -0.21
PTPN21-208ENST00000556564 ATP5L2Q7Z4Y8 100 aa13.71□□□□□ -0.21
PTPN21-208ENST00000556564 LINC00469Q8N7U9 141 aa13.71□□□□□ -0.21
PTPN21-208ENST00000556564 TRBV19A0A075B6N1 114 aa13.71□□□□□ -0.22
PTPN21-208ENST00000556564 C1orf194Q5T5A4 169 aa13.71□□□□□ -0.22
PTPN21-208ENST00000556564 NUP35Q8NFH5 326 aa13.71□□□□□ -0.22
PTPN21-208ENST00000556564 AZU1P20160 251 aa13.71□□□□□ -0.22
PTPN21-208ENST00000556564 SMKR1H3BMG3 65 aa13.7□□□□□ -0.22
PTPN21-208ENST00000556564 TMEM75Q8N9X5 138 aa13.7□□□□□ -0.22
PTPN21-208ENST00000556564 ARMS2P0C7Q2 107 aa13.7□□□□□ -0.22
PTPN21-208ENST00000556564 ERASQ7Z444 233 aa13.7□□□□□ -0.22
PTPN21-208ENST00000556564 CSTL1Q9H114 145 aa13.7□□□□□ -0.22
PTPN21-208ENST00000556564 OR5A1Q8NGJ0 315 aa13.7□□□□□ -0.22
PTPN21-208ENST00000556564 TNRC6AQ8NDV7 1962 aaKnown RBP13.7□□□□□ -0.22
PTPN21-208ENST00000556564 A0A0U1RRA0 63 aa13.7□□□□□ -0.22
PTPN21-208ENST00000556564 FOXE3Q13461 319 aa13.7□□□□□ -0.22
PTPN21-208ENST00000556564 TMEM170AQ8WVE7 144 aa13.69□□□□□ -0.22
PTPN21-208ENST00000556564 C14orf144Q96I85 54 aa13.69□□□□□ -0.22
PTPN21-208ENST00000556564 IGHV7-81A0A0B4J1V7 117 aa13.69□□□□□ -0.22
PTPN21-208ENST00000556564 GAGE12JA6NER3 117 aa13.69□□□□□ -0.22
PTPN21-208ENST00000556564 GAGE1Q13065 139 aa13.69□□□□□ -0.22
PTPN21-208ENST00000556564 GAGE4Q13068 117 aa13.69□□□□□ -0.22
PTPN21-208ENST00000556564 GAGE5Q13069 117 aa13.69□□□□□ -0.22
PTPN21-208ENST00000556564 GAGE13Q4V321 117 aa13.69□□□□□ -0.22
PTPN21-208ENST00000556564 Q8N7P7 452 aa13.69□□□□□ -0.22
PTPN21-208ENST00000556564 TTC28Q96AY4 2481 aa13.69□□□□□ -0.22
PTPN21-208ENST00000556564 IGLC1P0CG04 106 aa13.68□□□□□ -0.22
PTPN21-208ENST00000556564 Q8NFD4 153 aa13.68□□□□□ -0.22
PTPN21-208ENST00000556564 NPBQ8NG41 125 aa13.68□□□□□ -0.22
PTPN21-208ENST00000556564 C9orf66Q5T8R8 295 aa13.68□□□□□ -0.22
PTPN21-208ENST00000556564 IGLC7A0M8Q6 106 aa13.68□□□□□ -0.22
PTPN21-208ENST00000556564 CKS1BP61024 79 aa13.68□□□□□ -0.22
PTPN21-208ENST00000556564 MS4A6AQ9H2W1 248 aa13.67□□□□□ -0.22
PTPN21-208ENST00000556564 MED13Q9UHV7 2174 aa13.67□□□□□ -0.22
PTPN21-208ENST00000556564 CDKN1BP46527 198 aa13.67□□□□□ -0.22
PTPN21-208ENST00000556564 C5orf56Q8N8D9 126 aa13.67□□□□□ -0.22
PTPN21-208ENST00000556564 C1orf159Q96HA4 380 aa13.67□□□□□ -0.22
PTPN21-208ENST00000556564 IGHV1OR15-1A0A075B7D0 117 aa13.66□□□□□ -0.22
PTPN21-208ENST00000556564 TRBV7-9A0A0J9YWB2 115 aa13.66□□□□□ -0.22
PTPN21-208ENST00000556564 WFDC11Q8NEX6 87 aa13.66□□□□□ -0.22
PTPN21-208ENST00000556564 FABP2P12104 132 aa13.66□□□□□ -0.22
PTPN21-208ENST00000556564 C22orf34Q6ZV56 151 aa13.66□□□□□ -0.22
PTPN21-208ENST00000556564 APRG1Q8IVJ8 170 aa13.66□□□□□ -0.22
PTPN21-208ENST00000556564 DNAL4O96015 105 aa13.66□□□□□ -0.22
PTPN21-208ENST00000556564 PFN1P07737 140 aaKnown RBP13.66□□□□□ -0.22
PTPN21-208ENST00000556564 WNK2Q9Y3S1 2297 aa13.66□□□□□ -0.22
PTPN21-208ENST00000556564 A0A1B0GW64 132 aa13.65□□□□□ -0.22
PTPN21-208ENST00000556564 DPM2O94777 84 aa13.65□□□□□ -0.22
PTPN21-208ENST00000556564 GUSBP1Q15486 140 aa13.65□□□□□ -0.22
PTPN21-208ENST00000556564 THAP8Q8NA92 274 aa13.65□□□□□ -0.22
PTPN21-208ENST00000556564 VCYO14598 125 aa13.65□□□□□ -0.22
PTPN21-208ENST00000556564 A0A096LPF7 62 aa13.65□□□□□ -0.22
PTPN21-208ENST00000556564 AMN1Q8IY45 258 aa13.65□□□□□ -0.22
PTPN21-208ENST00000556564 F6UB75 175 aa13.65□□□□□ -0.22
PTPN21-208ENST00000556564 ANXA2RQ3ZCQ2 193 aa13.65□□□□□ -0.22
PTPN21-208ENST00000556564 CD300EQ496F6 205 aaPredicted RBP13.64□□□□□ -0.23
PTPN21-208ENST00000556564 COL5A1-AS1Q5SY13 56 aa13.64□□□□□ -0.23
PTPN21-208ENST00000556564 LOC102724200A0A096LPH7 203 aaPredicted RBP13.64□□□□□ -0.23
PTPN21-208ENST00000556564 CXCL1P09341 107 aa13.64□□□□□ -0.23
PTPN21-208ENST00000556564 LINC00158P58513 81 aa13.64□□□□□ -0.23
PTPN21-208ENST00000556564 RBMY1BA6NDE4 496 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms