RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 EIF3GO75821 320 aaKnown RBP eCLIP8.87□□□□□ -0.99
ACTN1-214ENST00000555075 AMBPP02760 352 aa8.87□□□□□ -0.99
ACTN1-214ENST00000555075 SEC11BP0C7V7 166 aa8.87□□□□□ -0.99
ACTN1-214ENST00000555075 ZNF705DP0CH99 300 aaPredicted RBP8.87□□□□□ -0.99
ACTN1-214ENST00000555075 ZNF705BP0CI00 300 aaPredicted RBP8.87□□□□□ -0.99
ACTN1-214ENST00000555075 CNN1P51911 297 aaKnown RBP8.87□□□□□ -0.99
ACTN1-214ENST00000555075 FXYD7P58549 80 aa8.87□□□□□ -0.99
ACTN1-214ENST00000555075 ICAM4Q14773 271 aa8.87□□□□□ -0.99
ACTN1-214ENST00000555075 GDF5OSQ5U4N7 250 aa8.87□□□□□ -0.99
ACTN1-214ENST00000555075 BAP18Q8IXM2 172 aa8.87□□□□□ -0.99
ACTN1-214ENST00000555075 FAM167A-AS1Q96KT0 104 aa8.87□□□□□ -0.99
ACTN1-214ENST00000555075 RARRES2Q99969 163 aa8.87□□□□□ -0.99
ACTN1-214ENST00000555075 CYTL1Q9NRR1 136 aa8.87□□□□□ -0.99
ACTN1-214ENST00000555075 TMEM167BQ9NRX6 74 aa8.87□□□□□ -0.99
ACTN1-214ENST00000555075 XCL2Q9UBD3 114 aa8.87□□□□□ -0.99
ACTN1-214ENST00000555075 RPH3ALQ9UNE2 315 aa8.87□□□□□ -0.99
ACTN1-214ENST00000555075 TP53TG1Q9Y2A0 90 aa8.87□□□□□ -0.99
ACTN1-214ENST00000555075 DNAH9Q9NYC9 4486 aa8.86□□□□□ -0.99
ACTN1-214ENST00000555075 IGHV3OR16-12A0A075B7B8 117 aa8.86□□□□□ -0.99
ACTN1-214ENST00000555075 ZNF705FA8MVS1 300 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-214ENST00000555075 UMAD1C9J7I0 102 aa8.86□□□□□ -0.99
ACTN1-214ENST00000555075 ARL14EPLP0DKL9 152 aa8.86□□□□□ -0.99
ACTN1-214ENST00000555075 TSPOP30536 169 aa8.86□□□□□ -0.99
ACTN1-214ENST00000555075 LYPD1Q8N2G4 141 aa8.86□□□□□ -0.99
ACTN1-214ENST00000555075 EXOC3-AS1Q8N2X6 119 aa8.86□□□□□ -0.99
ACTN1-214ENST00000555075 RPP25LQ8N5L8 163 aaKnown RBP8.86□□□□□ -0.99
ACTN1-214ENST00000555075 FAM213BQ8TBF2 198 aa8.86□□□□□ -0.99
ACTN1-214ENST00000555075 RXFP4Q8TDU9 374 aa8.86□□□□□ -0.99
ACTN1-214ENST00000555075 RNF183Q96D59 192 aa8.86□□□□□ -0.99
ACTN1-214ENST00000555075 FXYD5Q96DB9 178 aa8.86□□□□□ -0.99
ACTN1-214ENST00000555075 MRPL53Q96EL3 112 aaKnown RBP8.86□□□□□ -0.99
ACTN1-214ENST00000555075 SAT2Q96F10 170 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-214ENST00000555075 GOLT1BQ9Y3E0 138 aa8.86□□□□□ -0.99
ACTN1-214ENST00000555075 TEX46H3BTG2 121 aa8.85□□□□□ -0.99
ACTN1-214ENST00000555075 STAG3L2P0CL84 134 aa8.85□□□□□ -0.99
ACTN1-214ENST00000555075 STAG3L3P0CL85 134 aa8.85□□□□□ -0.99
ACTN1-214ENST00000555075 LGALSLQ3ZCW2 172 aaPredicted RBP8.85□□□□□ -0.99
ACTN1-214ENST00000555075 TMEM78Q5T7P6 136 aa8.85□□□□□ -0.99
ACTN1-214ENST00000555075 OR11H2Q8NH07 326 aa8.85□□□□□ -0.99
ACTN1-214ENST00000555075 PHYHIPLQ96FC7 376 aa8.85□□□□□ -0.99
ACTN1-214ENST00000555075 OVOL2Q9BRP0 275 aa8.85□□□□□ -0.99
ACTN1-214ENST00000555075 Q9H3A6 140 aa8.85□□□□□ -0.99
ACTN1-214ENST00000555075 MAP1LC3B2A6NCE7 125 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 PGPA6NDG6 321 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 BOLA2-SMG1P6H3BVE0 249 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 K7EQM0 130 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 INSP01308 110 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 PRB4P10163 310 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-214ENST00000555075 GCHFRP30047 84 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 LEPP41159 167 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 COL7A1Q02388 2944 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 SLC51BQ86UW2 128 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 TMED6Q8WW62 240 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 CLUHP3Q96NS8 147 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 MAP1LC3BQ9GZQ8 125 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 SLC35B3Q9H1N7 401 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 OTORQ9NRC9 128 aa8.84□□□□□ -0.99
ACTN1-214ENST00000555075 M0R3E3 92 aa8.83□□□□□ -1
ACTN1-214ENST00000555075 NDUFB4O95168 129 aa8.83□□□□□ -1
ACTN1-214ENST00000555075 SLC25A5P05141 298 aaKnown RBP8.83□□□□□ -1
ACTN1-214ENST00000555075 FGF8P55075 233 aaPredicted RBP8.83□□□□□ -1
ACTN1-214ENST00000555075 SPINK13Q1W4C9 94 aa8.83□□□□□ -1
ACTN1-214ENST00000555075 DPPA3Q6W0C5 159 aa8.83□□□□□ -1
ACTN1-214ENST00000555075 SFT2D1Q8WV19 159 aa8.83□□□□□ -1
ACTN1-214ENST00000555075 WWC2-AS2Q96NR7 200 aa8.83□□□□□ -1
ACTN1-214ENST00000555075 PRAC2D3DTV9 90 aa8.82□□□□□ -1
ACTN1-214ENST00000555075 J3KRW8 73 aa8.82□□□□□ -1
ACTN1-214ENST00000555075 M0R2Z0 102 aa8.82□□□□□ -1
ACTN1-214ENST00000555075 IFNA7P01567 189 aa8.82□□□□□ -1
ACTN1-214ENST00000555075 RAB5CP51148 216 aa8.82□□□□□ -1
ACTN1-214ENST00000555075 IL17DQ8TAD2 202 aa8.82□□□□□ -1
ACTN1-214ENST00000555075 ZNF503Q96F45 646 aa8.82□□□□□ -1
ACTN1-214ENST00000555075 LINC00477Q96M19 166 aa8.82□□□□□ -1
ACTN1-214ENST00000555075 IGKV2-40A0A087WW87 121 aaPredicted RBP8.81□□□□□ -1
ACTN1-214ENST00000555075 A0A1B0GV50 99 aa8.81□□□□□ -1
ACTN1-214ENST00000555075 IGKV2D-40P01614 121 aaPredicted RBP8.81□□□□□ -1
ACTN1-214ENST00000555075 H2AFB1P0C5Y9 115 aa8.81□□□□□ -1
ACTN1-214ENST00000555075 CDKN1BP46527 198 aa8.81□□□□□ -1
ACTN1-214ENST00000555075 UBE2G2P60604 165 aa8.81□□□□□ -1
ACTN1-214ENST00000555075 CD300CQ08708 224 aa8.81□□□□□ -1
ACTN1-214ENST00000555075 ERCC8Q13216 396 aa8.81□□□□□ -1
ACTN1-214ENST00000555075 C9orf62Q8N4C0 152 aa8.81□□□□□ -1
ACTN1-214ENST00000555075 IGF2BP2-AS1Q96M15 143 aa8.81□□□□□ -1
ACTN1-214ENST00000555075 LINC01587Q99440 93 aa8.81□□□□□ -1
ACTN1-214ENST00000555075 NPIPB6E9PJ23 425 aa8.8□□□□□ -1
ACTN1-214ENST00000555075 HBE1P02100 147 aa8.8□□□□□ -1
ACTN1-214ENST00000555075 MIFP14174 115 aa8.8□□□□□ -1
ACTN1-214ENST00000555075 HTN1P15515 57 aa8.8□□□□□ -1
ACTN1-214ENST00000555075 PPT1P50897 306 aa8.8□□□□□ -1
ACTN1-214ENST00000555075 NKX2-5P52952 324 aaPredicted RBP8.8□□□□□ -1
ACTN1-214ENST00000555075 SUMO1P63165 101 aaKnown RBP8.8□□□□□ -1
ACTN1-214ENST00000555075 CST9LP1Q5W188 147 aa8.8□□□□□ -1
ACTN1-214ENST00000555075 C5orf17Q8NAS9 161 aa8.8□□□□□ -1
ACTN1-214ENST00000555075 NIPSNAP3BQ9BS92 247 aa8.8□□□□□ -1
ACTN1-214ENST00000555075 NDFIP1Q9BT67 221 aa8.8□□□□□ -1
ACTN1-214ENST00000555075 NKX6-2Q9C056 277 aaPredicted RBP8.8□□□□□ -1
ACTN1-214ENST00000555075 KMT2CQ8NEZ4 4911 aaKnown RBP8.8□□□□□ -1
ACTN1-214ENST00000555075 TRAV12-2A0A075B6T6 113 aa8.79□□□□□ -1
ACTN1-214ENST00000555075 A0A0J9YWU9 116 aa8.79□□□□□ -1
ACTN1-214ENST00000555075 SERTM2A0A1B0GWG4 89 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms