RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 OTORQ9NRC9 128 aa10.95□□□□□ -0.66
SHMT2-208ENST00000553868 IGHV3OR16-13A0A075B7E8 117 aa10.94□□□□□ -0.66
SHMT2-208ENST00000553868 IGHV3-74A0A0B4J1X5 117 aa10.94□□□□□ -0.66
SHMT2-208ENST00000553868 C9JQL5 133 aa10.94□□□□□ -0.66
SHMT2-208ENST00000553868 F8W036 122 aa10.94□□□□□ -0.66
SHMT2-208ENST00000553868 CHEK1O14757 476 aa10.94□□□□□ -0.66
SHMT2-208ENST00000553868 SUMO1P63165 101 aaKnown RBP10.94□□□□□ -0.66
SHMT2-208ENST00000553868 OR9G4Q8NGQ1 327 aa10.94□□□□□ -0.66
SHMT2-208ENST00000553868 RPUSD4Q96CM3 377 aaKnown RBP10.94□□□□□ -0.66
SHMT2-208ENST00000553868 SLC50A1Q9BRV3 221 aa10.94□□□□□ -0.66
SHMT2-208ENST00000553868 SEC11CQ9BY50 192 aa10.94□□□□□ -0.66
SHMT2-208ENST00000553868 Q9H3A6 140 aa10.94□□□□□ -0.66
SHMT2-208ENST00000553868 CLEC5AQ9NY25 188 aa10.94□□□□□ -0.66
SHMT2-208ENST00000553868 PGPA6NDG6 321 aa10.93□□□□□ -0.66
SHMT2-208ENST00000553868 C2orf70A6NJV1 201 aa10.93□□□□□ -0.66
SHMT2-208ENST00000553868 GGTLC3B5MD39 225 aa10.93□□□□□ -0.66
SHMT2-208ENST00000553868 CEBPGP53567 150 aa10.93□□□□□ -0.66
SHMT2-208ENST00000553868 FAM74A3Q4VXF1 159 aa10.93□□□□□ -0.66
SHMT2-208ENST00000553868 CCDC28AQ8IWP9 274 aa10.93□□□□□ -0.66
SHMT2-208ENST00000553868 CYB561D1Q8N8Q1 229 aa10.93□□□□□ -0.66
SHMT2-208ENST00000553868 C5orf17Q8NAS9 161 aa10.93□□□□□ -0.66
SHMT2-208ENST00000553868 CMTM2Q8TAZ6 248 aa10.93□□□□□ -0.66
SHMT2-208ENST00000553868 NDUFB4O95168 129 aa10.92□□□□□ -0.66
SHMT2-208ENST00000553868 SLC25A5P05141 298 aaKnown RBP10.92□□□□□ -0.66
SHMT2-208ENST00000553868 CBLN1P23435 193 aa10.92□□□□□ -0.66
SHMT2-208ENST00000553868 CSN1S1P47710 185 aa10.92□□□□□ -0.66
SHMT2-208ENST00000553868 ARL6IP6Q8N6S5 226 aa10.92□□□□□ -0.66
SHMT2-208ENST00000553868 DLX4Q92988 240 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-208ENST00000553868 HIST1H2BAQ96A08 127 aa10.92□□□□□ -0.66
SHMT2-208ENST00000553868 C11orf52Q96A22 123 aa10.92□□□□□ -0.66
SHMT2-208ENST00000553868 DUX3Q96PT4 197 aa10.92□□□□□ -0.66
SHMT2-208ENST00000553868 PRELID1Q9Y255 219 aa10.92□□□□□ -0.66
SHMT2-208ENST00000553868 SMAD5-AS1Q9Y6J3 95 aa10.92□□□□□ -0.66
SHMT2-208ENST00000553868 H3BTX0 84 aa10.91□□□□□ -0.66
SHMT2-208ENST00000553868 OVOL1O14753 267 aa10.91□□□□□ -0.66
SHMT2-208ENST00000553868 SNRPCP09234 159 aaKnown RBP10.91□□□□□ -0.66
SHMT2-208ENST00000553868 FOLR2P14207 255 aa10.91□□□□□ -0.66
SHMT2-208ENST00000553868 RPL11P62913 178 aaKnown RBP10.91□□□□□ -0.66
SHMT2-208ENST00000553868 TCF24Q7RTU0 167 aa10.91□□□□□ -0.66
SHMT2-208ENST00000553868 LINC00052Q96N35 136 aa10.91□□□□□ -0.66
SHMT2-208ENST00000553868 EPDR1Q9UM22 224 aa10.91□□□□□ -0.66
SHMT2-208ENST00000553868 CARHSP1Q9Y2V2 147 aaKnown RBP10.91□□□□□ -0.66
SHMT2-208ENST00000553868 SCO2A0A1W2PP80 73 aa10.9□□□□□ -0.66
SHMT2-208ENST00000553868 ZNF727A8MUV8 499 aa10.9□□□□□ -0.66
SHMT2-208ENST00000553868 K7EQM0 130 aa10.9□□□□□ -0.66
SHMT2-208ENST00000553868 PEX7O00628 323 aa10.9□□□□□ -0.66
SHMT2-208ENST00000553868 S100A9P06702 114 aaKnown RBP10.9□□□□□ -0.66
SHMT2-208ENST00000553868 AKR1C3P42330 323 aa10.9□□□□□ -0.66
SHMT2-208ENST00000553868 C10orf91Q5T1B1 145 aa10.9□□□□□ -0.66
SHMT2-208ENST00000553868 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.9□□□□□ -0.66
SHMT2-208ENST00000553868 DYNLRB2Q8TF09 96 aa10.9□□□□□ -0.66
SHMT2-208ENST00000553868 C17orf77Q96MU5 243 aa10.9□□□□□ -0.66
SHMT2-208ENST00000553868 NRN1Q9NPD7 142 aa10.9□□□□□ -0.66
SHMT2-208ENST00000553868 ZNF331Q9NQX6 463 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-208ENST00000553868 SERTM2A0A1B0GWG4 89 aa10.89□□□□□ -0.67
SHMT2-208ENST00000553868 SLC17A3O00476 420 aa10.89□□□□□ -0.67
SHMT2-208ENST00000553868 PF4P02776 101 aa10.89□□□□□ -0.67
SHMT2-208ENST00000553868 CNN1P51911 297 aaKnown RBP10.89□□□□□ -0.67
SHMT2-208ENST00000553868 PAFAH1B2P68402 229 aa10.89□□□□□ -0.67
SHMT2-208ENST00000553868 FAM90A2PQ658T7 463 aa10.89□□□□□ -0.67
SHMT2-208ENST00000553868 MRPL53Q96EL3 112 aaKnown RBP10.89□□□□□ -0.67
SHMT2-208ENST00000553868 C16orf92Q96LL3 132 aa10.89□□□□□ -0.67
SHMT2-208ENST00000553868 SMIM7Q9BQ49 75 aa10.89□□□□□ -0.67
SHMT2-208ENST00000553868 NIPSNAP3BQ9BS92 247 aa10.89□□□□□ -0.67
SHMT2-208ENST00000553868 ATG101Q9BSB4 218 aa10.89□□□□□ -0.67
SHMT2-208ENST00000553868 PARLQ9H300 379 aa10.89□□□□□ -0.67
SHMT2-208ENST00000553868 SIGLEC8Q9NYZ4 499 aa10.89□□□□□ -0.67
SHMT2-208ENST00000553868 APOC3P02656 99 aa10.88□□□□□ -0.67
SHMT2-208ENST00000553868 CSN3P07498 182 aa10.88□□□□□ -0.67
SHMT2-208ENST00000553868 ID1P41134 155 aa10.88□□□□□ -0.67
SHMT2-208ENST00000553868 ZNF674Q2M3X9 581 aa10.88□□□□□ -0.67
SHMT2-208ENST00000553868 EXOC3-AS1Q8N2X6 119 aa10.88□□□□□ -0.67
SHMT2-208ENST00000553868 SVBPQ8N300 66 aa10.88□□□□□ -0.67
SHMT2-208ENST00000553868 FBLL1A6NHQ2 334 aaKnown RBP10.87□□□□□ -0.67
SHMT2-208ENST00000553868 ISLRO14498 428 aa10.87□□□□□ -0.67
SHMT2-208ENST00000553868 TCRAP04437 139 aa10.87□□□□□ -0.67
SHMT2-208ENST00000553868 ADCYAP1P18509 176 aa10.87□□□□□ -0.67
SHMT2-208ENST00000553868 TAS2R60P59551 318 aa10.87□□□□□ -0.67
SHMT2-208ENST00000553868 PNRC1Q12796 327 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-208ENST00000553868 TMEM241Q24JQ0 296 aa10.87□□□□□ -0.67
SHMT2-208ENST00000553868 MLXQ9UH92 298 aa10.87□□□□□ -0.67
SHMT2-208ENST00000553868 NAT8Q9UHE5 227 aa10.87□□□□□ -0.67
SHMT2-208ENST00000553868 RPH3ALQ9UNE2 315 aa10.87□□□□□ -0.67
SHMT2-208ENST00000553868 KIAA1109Q2LD37 5005 aa10.86□□□□□ -0.67
SHMT2-208ENST00000553868 TRAV2A0A0B4J234 112 aa10.86□□□□□ -0.67
SHMT2-208ENST00000553868 DNASE2O00115 360 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-208ENST00000553868 UBE2G1P62253 170 aa10.86□□□□□ -0.67
SHMT2-208ENST00000553868 RBPMS2Q6ZRY4 209 aaKnown RBP10.86□□□□□ -0.67
SHMT2-208ENST00000553868 C2CD4CQ8TF44 421 aa10.86□□□□□ -0.67
SHMT2-208ENST00000553868 FMC1Q96HJ9 113 aa10.86□□□□□ -0.67
SHMT2-208ENST00000553868 RCHY1Q96PM5 261 aa10.86□□□□□ -0.67
SHMT2-208ENST00000553868 TRAV25A0A0B4J276 109 aa10.85□□□□□ -0.67
SHMT2-208ENST00000553868 C9JCJ5 164 aa10.85□□□□□ -0.67
SHMT2-208ENST00000553868 SNAPINO95295 136 aa10.85□□□□□ -0.67
SHMT2-208ENST00000553868 EDN2P20800 178 aa10.85□□□□□ -0.67
SHMT2-208ENST00000553868 RPL35P42766 123 aaKnown RBP10.85□□□□□ -0.67
SHMT2-208ENST00000553868 GNG5P63218 68 aa10.85□□□□□ -0.67
SHMT2-208ENST00000553868 PSG3Q16557 428 aa10.85□□□□□ -0.67
SHMT2-208ENST00000553868 TVP23CQ96ET8 276 aa10.85□□□□□ -0.67
SHMT2-208ENST00000553868 ALMS1Q8TCU4 4167 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms