RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 DYNAPQ8N1N2 210 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 C19orf24Q9BVV8 132 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 TRAV1-1A0A0B4J248 108 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 A0A0U1RRA0 63 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 Q6ZSR3 168 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 A0A087WWL8 130 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 hDV102S1A0JD36 115 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 D6R8Y8 96 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 PSG9Q00887 426 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 Q5PR19 223 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 NEGR1Q7Z3B1 354 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 NIT1Q86X76 327 aa8.55□□□□□ -1.04
TGFBR1-209ENST00000552516 IZUMO1RA6ND01 250 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 NDUFA3O95167 84 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 IGHV2-70P01814 119 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 VGLL1Q99990 258 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 NUPR1O60356 82 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 GCSHP23434 173 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 SLAQ13239 276 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 TMEM30BQ3MIR4 351 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 Q8N7P7 452 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 OTORQ9NRC9 128 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 NPFFR1Q9GZQ6 430 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 FAM90A9PA6NNJ1 464 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 MSMBP08118 114 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 ID1P41134 155 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 OR4C5Q8NGB2 326 aa8.54□□□□□ -1.04
TGFBR1-209ENST00000552516 A0A1W2PS18 150 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 ACTL10Q5JWF8 245 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 FAM162BQ5T6X4 162 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 PATE2Q6UY27 113 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 SIGLEC15Q6ZMC9 328 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 MYOZ3Q8TDC0 251 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 ATRQ13535 2644 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 UBE2CO00762 179 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 MT-ND6P03923 174 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 PFN1P07737 140 aaKnown RBP8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 JMJD8Q96S16 334 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 GUSBP1Q15486 140 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 MAJINQ3KP22 176 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 REC114Q7Z4M0 266 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 DDB2Q92466 427 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 RCHY1Q96PM5 261 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 MOB4Q9Y3A3 225 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 CPAMD8Q8IZJ3 1885 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 C14orf178Q8N769 122 aaPredicted RBP8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 B4DSR2 109 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 SH2D1AO60880 128 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 ZNF562Q6V9R5 426 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 FMC1Q96HJ9 113 aa8.53□□□□□ -1.04
TGFBR1-209ENST00000552516 SRSF9Q13242 221 aaKnown RBP eCLIP8.52□□□□□ -1.04
TGFBR1-209ENST00000552516 PIP4P2Q8N4L2 257 aa8.52□□□□□ -1.04
TGFBR1-209ENST00000552516 FOXC2Q99958 501 aa8.52□□□□□ -1.04
TGFBR1-209ENST00000552516 RHPN1-AS1Q9BWJ2 59 aa8.52□□□□□ -1.04
TGFBR1-209ENST00000552516 KLK9Q9UKQ9 250 aa8.52□□□□□ -1.04
TGFBR1-209ENST00000552516 TRBV24-1A0A075B6N3 115 aa8.52□□□□□ -1.05
TGFBR1-209ENST00000552516 IGLC1P0CG04 106 aa8.52□□□□□ -1.05
TGFBR1-209ENST00000552516 IGHV2-70DA0A0C4DH43 119 aa8.52□□□□□ -1.05
TGFBR1-209ENST00000552516 LDLRAD2Q5SZI1 272 aa8.52□□□□□ -1.05
TGFBR1-209ENST00000552516 VPS25Q9BRG1 176 aa8.52□□□□□ -1.05
TGFBR1-209ENST00000552516 FAM181BA6NEQ2 426 aa8.52□□□□□ -1.05
TGFBR1-209ENST00000552516 RPL35AP18077 110 aaKnown RBP8.52□□□□□ -1.05
TGFBR1-209ENST00000552516 WIPF2Q8TF74 440 aaPredicted RBP8.52□□□□□ -1.05
TGFBR1-209ENST00000552516 TRGV9Q99603 122 aa8.52□□□□□ -1.05
TGFBR1-209ENST00000552516 PF4P02776 101 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 TAS2R60P59551 318 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 CACNG7P62955 275 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 PVRIGQ6DKI7 326 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 MAP1LC3AQ9H492 121 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 FABP5P3A8MUU1 101 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 TRBV12-3P01733 135 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 PRSS2P07478 247 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 SCGB1C2P0DMR2 95 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 HSPB8Q9UJY1 196 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 LEPP41159 167 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 SNRPD3P62318 126 aaKnown RBP8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 LINC01587Q99440 93 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 DEFB112Q30KQ8 113 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 TSKUQ8WUA8 353 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 OSTCQ9NRP0 149 aa8.51□□□□□ -1.05
TGFBR1-209ENST00000552516 FOLR2P14207 255 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 RPL24P83731 157 aaKnown RBP8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 CFHR3Q02985 330 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 SPINK13Q1W4C9 94 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 KLHL30-AS1Q8NEE0 82 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 TNFRSF14Q92956 283 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 ZNF324O75467 553 aaPredicted RBP8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 PRR20EP86478 221 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 PRR20CP86479 221 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 PRR20DP86480 221 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 PRR20BP86481 221 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 PRR20AP86496 221 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 SAPCD1Q5SSQ6 148 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 FXYD5Q96DB9 178 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 TMEM70Q9BUB7 260 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 IGHV1-69DA0A0B4J2H0 117 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 IGHV1-69P01742 117 aa8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 TEP1Q99973 2627 aaKnown RBP8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 CRXO43186 299 aaPredicted RBP8.5□□□□□ -1.05
TGFBR1-209ENST00000552516 C10orf99Q6UWK7 81 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms