RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 CT45A10P0DMU9 189 aa14.35□□□□□ -0.11
PRPF40B-208ENST00000548436 C10orf105Q8TEF2 133 aa14.35□□□□□ -0.11
PRPF40B-208ENST00000548436 TRAV40A0A0B4J280 105 aa14.34□□□□□ -0.11
PRPF40B-208ENST00000548436 CLPSL1A2RUU4 121 aa14.34□□□□□ -0.11
PRPF40B-208ENST00000548436 EREGO14944 169 aa14.34□□□□□ -0.11
PRPF40B-208ENST00000548436 BUB3O43684 328 aa14.34□□□□□ -0.11
PRPF40B-208ENST00000548436 ARL6IP6Q8N6S5 226 aa14.34□□□□□ -0.11
PRPF40B-208ENST00000548436 VGLL1Q99990 258 aa14.34□□□□□ -0.11
PRPF40B-208ENST00000548436 C2orf88Q9BSF0 95 aa14.34□□□□□ -0.11
PRPF40B-208ENST00000548436 NDFIP1Q9BT67 221 aa14.34□□□□□ -0.11
PRPF40B-208ENST00000548436 FAM181BA6NEQ2 426 aa14.34□□□□□ -0.11
PRPF40B-208ENST00000548436 SH2D1AO60880 128 aa14.34□□□□□ -0.11
PRPF40B-208ENST00000548436 RELQ04864 619 aaPredicted RBP14.34□□□□□ -0.11
PRPF40B-208ENST00000548436 PRR25Q96S07 402 aa14.34□□□□□ -0.11
PRPF40B-208ENST00000548436 MOB4Q9Y3A3 225 aa14.34□□□□□ -0.11
PRPF40B-208ENST00000548436 GOSR1O95249 250 aa14.33□□□□□ -0.12
PRPF40B-208ENST00000548436 EBLN2Q6P2I7 272 aa14.33□□□□□ -0.12
PRPF40B-208ENST00000548436 COX8CQ7Z4L0 72 aa14.33□□□□□ -0.12
PRPF40B-208ENST00000548436 Q8TAT8 98 aa14.33□□□□□ -0.12
PRPF40B-208ENST00000548436 EEF1AKMT3Q96AZ1 226 aa14.33□□□□□ -0.12
PRPF40B-208ENST00000548436 KMT2BQ9UMN6 2715 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-208ENST00000548436 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 IGHV3-66A0A0C4DH42 116 aa14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 RIGQ13278 110 aa14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 LBHQ53QV2 105 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 TPPP3Q9BW30 176 aa14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 SNHG12Q9BXW3 62 aa14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 LINC00527Q9UJ94 153 aa14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 RNF224P0DH78 156 aa14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 S100A7P31151 101 aa14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 PMCHL1Q16048 86 aa14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 C19orf54Q5BKX5 351 aa14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 FAM162BQ5T6X4 162 aa14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 LCN12Q6JVE5 192 aa14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 GATD1Q8NB37 220 aa14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 MIEN1Q9BRT3 115 aa14.32□□□□□ -0.12
PRPF40B-208ENST00000548436 TMSB15BA0A087X1C1 80 aa14.31□□□□□ -0.12
PRPF40B-208ENST00000548436 TRBV7-1A0A0A6YYK4 115 aa14.31□□□□□ -0.12
PRPF40B-208ENST00000548436 IGHV4-38-2P0DP08 117 aa14.31□□□□□ -0.12
PRPF40B-208ENST00000548436 CTRLP40313 264 aa14.31□□□□□ -0.12
PRPF40B-208ENST00000548436 SAPCD1Q5SSQ6 148 aa14.31□□□□□ -0.12
PRPF40B-208ENST00000548436 ZNF705AQ6ZN79 300 aaPredicted RBP14.31□□□□□ -0.12
PRPF40B-208ENST00000548436 IGHV4-30-2A0A087WSY4 118 aa14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 A0A087X0K7 114 aa14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 TMEM189A5PLL7 270 aa14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 C2orf70A6NJV1 201 aa14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 ZNF80P51504 273 aaPredicted RBP14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 ATP5J2P56134 94 aa14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 BBC3Q96PG8 261 aaPredicted RBP14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 MEGF9Q9H1U4 602 aa14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 FLNCQ14315 2725 aa14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 IGHV3OR16-13A0A075B7E8 117 aa14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 IGHV3-74A0A0B4J1X5 117 aa14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 TRAV41A0A0B4J266 112 aa14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 Q6AWC8 147 aa14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 ZMAT5Q9UDW3 170 aaKnown RBP14.3□□□□□ -0.12
PRPF40B-208ENST00000548436 PRAC2D3DTV9 90 aa14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 NDUFS8O00217 210 aa14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 RAB9AP51151 201 aa14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 CLEC2AQ6UVW9 174 aa14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 LYZL1Q6UWQ5 148 aa14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 CHCHD1Q96BP2 118 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 CLEC5AQ9NY25 188 aa14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 IGHV1-24A0A0C4DH33 117 aa14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 FBLL1A6NHQ2 334 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 ZNF207O43670 478 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 LINC00614P0C842 121 aa14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 ZNF138P52744 262 aa14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 ATP5G2Q06055 141 aa14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 SPATA45Q537H7 98 aa14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 RNF182Q8N6D2 247 aa14.29□□□□□ -0.12
PRPF40B-208ENST00000548436 SPG11Q96JI7 2443 aa14.28□□□□□ -0.12
PRPF40B-208ENST00000548436 IGHV3-49A0A0A0MS15 119 aa14.28□□□□□ -0.12
PRPF40B-208ENST00000548436 A0A1B0GW15 77 aa14.28□□□□□ -0.12
PRPF40B-208ENST00000548436 BTF3P20290 206 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-208ENST00000548436 RAB4AP20338 218 aa14.28□□□□□ -0.12
PRPF40B-208ENST00000548436 ERCC8Q13216 396 aa14.28□□□□□ -0.12
PRPF40B-208ENST00000548436 ATOH7Q8N100 152 aa14.28□□□□□ -0.12
PRPF40B-208ENST00000548436 DOPEY1Q5JWR5 2465 aa14.28□□□□□ -0.12
PRPF40B-208ENST00000548436 CRIP2P52943 208 aaPredicted RBP14.27□□□□□ -0.12
PRPF40B-208ENST00000548436 SSTP61278 116 aa14.27□□□□□ -0.12
PRPF40B-208ENST00000548436 SPATA12Q7Z6I5 190 aa14.27□□□□□ -0.12
PRPF40B-208ENST00000548436 CELSR2Q9HCU4 2923 aa14.27□□□□□ -0.12
PRPF40B-208ENST00000548436 USP9XQ93008 2570 aaPredicted RBP14.27□□□□□ -0.12
PRPF40B-208ENST00000548436 M0R143 59 aa14.27□□□□□ -0.13
PRPF40B-208ENST00000548436 ZNF575Q86XF7 245 aa14.27□□□□□ -0.13
PRPF40B-208ENST00000548436 LINC00469Q8N7U9 141 aa14.27□□□□□ -0.13
PRPF40B-208ENST00000548436 TMEM213A2RRL7 107 aa14.26□□□□□ -0.13
PRPF40B-208ENST00000548436 PRB1P04280 392 aa14.26□□□□□ -0.13
PRPF40B-208ENST00000548436 LY6EQ16553 131 aa14.26□□□□□ -0.13
PRPF40B-208ENST00000548436 ZNF493Q6ZR52 646 aa14.26□□□□□ -0.13
PRPF40B-208ENST00000548436 LINC00173Q6ZV60 143 aa14.26□□□□□ -0.13
PRPF40B-208ENST00000548436 METTL26Q96S19 204 aa14.26□□□□□ -0.13
PRPF40B-208ENST00000548436 FAM208BQ5VWN6 2430 aa14.26□□□□□ -0.13
PRPF40B-208ENST00000548436 CRYBG3Q68DQ2 2970 aa14.26□□□□□ -0.13
PRPF40B-208ENST00000548436 MAJINQ3KP22 176 aa14.26□□□□□ -0.13
PRPF40B-208ENST00000548436 U3KQE9 123 aa14.26□□□□□ -0.13
PRPF40B-208ENST00000548436 MAP1AP78559 2803 aaPredicted RBP14.25□□□□□ -0.13
PRPF40B-208ENST00000548436 MUC21A0A0G2JKD1 596 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms