RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 FOSL1P15407 271 aa18.24■□□□□ 0.51
FOXA1-202ENST00000545425 SYS1-DBNDD2H3BUS1 97 aa18.23■□□□□ 0.51
FOXA1-202ENST00000545425 Q56UQ5 140 aa18.23■□□□□ 0.51
FOXA1-202ENST00000545425 VMO1Q7Z5L0 202 aa18.23■□□□□ 0.51
FOXA1-202ENST00000545425 PKDREJQ9NTG1 2253 aa18.23■□□□□ 0.51
FOXA1-202ENST00000545425 OVOL3O00110 214 aa18.23■□□□□ 0.51
FOXA1-202ENST00000545425 TSPOP30536 169 aa18.23■□□□□ 0.51
FOXA1-202ENST00000545425 SRSF2Q01130 221 aaKnown RBP18.23■□□□□ 0.51
FOXA1-202ENST00000545425 PRB3Q04118 309 aaPredicted RBP18.23■□□□□ 0.51
FOXA1-202ENST00000545425 TMEM208Q9BTX3 173 aa18.23■□□□□ 0.51
FOXA1-202ENST00000545425 TEX15Q9BXT5 2789 aa18.23■□□□□ 0.51
FOXA1-202ENST00000545425 NDUFB8O95169 186 aa18.22■□□□□ 0.51
FOXA1-202ENST00000545425 MAP1LC3CQ9BXW4 147 aa18.22■□□□□ 0.51
FOXA1-202ENST00000545425 ROS1P08922 2347 aa18.21■□□□□ 0.51
FOXA1-202ENST00000545425 ZNF785A8K8V0 405 aa18.21■□□□□ 0.51
FOXA1-202ENST00000545425 LCN12Q6JVE5 192 aa18.21■□□□□ 0.51
FOXA1-202ENST00000545425 ADGRG4Q8IZF6 3080 aa18.2■□□□□ 0.5
FOXA1-202ENST00000545425 MS4A6AQ9H2W1 248 aa18.2■□□□□ 0.5
FOXA1-202ENST00000545425 RABAC1Q9UI14 185 aa18.2■□□□□ 0.5
FOXA1-202ENST00000545425 GOLT1BQ9Y3E0 138 aa18.2■□□□□ 0.5
FOXA1-202ENST00000545425 OR4C46A6NHA9 309 aa18.19■□□□□ 0.5
FOXA1-202ENST00000545425 HSBP1L1C9JCN9 74 aa18.19■□□□□ 0.5
FOXA1-202ENST00000545425 SPATA12Q7Z6I5 190 aa18.19■□□□□ 0.5
FOXA1-202ENST00000545425 C17orf77Q96MU5 243 aa18.19■□□□□ 0.5
FOXA1-202ENST00000545425 F8W735 103 aaPredicted RBP18.19■□□□□ 0.5
FOXA1-202ENST00000545425 FAM106CPP0CH98 169 aa18.19■□□□□ 0.5
FOXA1-202ENST00000545425 BMI1P35226 326 aa18.19■□□□□ 0.5
FOXA1-202ENST00000545425 KLRD1Q13241 179 aa18.19■□□□□ 0.5
FOXA1-202ENST00000545425 TMEM11P17152 192 aa18.18■□□□□ 0.5
FOXA1-202ENST00000545425 BATFQ16520 125 aa18.18■□□□□ 0.5
FOXA1-202ENST00000545425 ABCA12Q86UK0 2595 aa18.18■□□□□ 0.5
FOXA1-202ENST00000545425 TMEM189A5PLL7 270 aa18.17■□□□□ 0.5
FOXA1-202ENST00000545425 ARMS2P0C7Q2 107 aa18.17■□□□□ 0.5
FOXA1-202ENST00000545425 IGLL1P15814 213 aa18.17■□□□□ 0.5
FOXA1-202ENST00000545425 G0S2P27469 103 aa18.17■□□□□ 0.5
FOXA1-202ENST00000545425 AP5S1Q9NUS5 200 aa18.17■□□□□ 0.5
FOXA1-202ENST00000545425 NCBP2LA6PVI3 153 aaKnown RBP18.16■□□□□ 0.5
FOXA1-202ENST00000545425 FAM110DQ8TAY7 271 aaPredicted RBP18.16■□□□□ 0.5
FOXA1-202ENST00000545425 CLEC5AQ9NY25 188 aa18.16■□□□□ 0.5
FOXA1-202ENST00000545425 U3KQK5 164 aa18.16■□□□□ 0.5
FOXA1-202ENST00000545425 CRIP1P50238 77 aa18.16■□□□□ 0.5
FOXA1-202ENST00000545425 ORAOV1Q8WV07 137 aa18.16■□□□□ 0.5
FOXA1-202ENST00000545425 SIRPDQ9H106 197 aa18.16■□□□□ 0.5
FOXA1-202ENST00000545425 FA2HQ7L5A8 372 aa18.15■□□□□ 0.5
FOXA1-202ENST00000545425 A0A087X0K7 114 aa18.14■□□□□ 0.5
FOXA1-202ENST00000545425 TOX4O94842 621 aa18.14■□□□□ 0.5
FOXA1-202ENST00000545425 ATOH7Q8N100 152 aa18.14■□□□□ 0.5
FOXA1-202ENST00000545425 OR10AG1Q8NH19 301 aa18.14■□□□□ 0.5
FOXA1-202ENST00000545425 ATP6V0BQ99437 205 aa18.14■□□□□ 0.5
FOXA1-202ENST00000545425 APCP25054 2843 aa18.14■□□□□ 0.49
FOXA1-202ENST00000545425 UBE2E1P51965 193 aa18.14■□□□□ 0.49
FOXA1-202ENST00000545425 KLF17Q5JT82 389 aaPredicted RBP18.14■□□□□ 0.49
FOXA1-202ENST00000545425 PMCHL2Q9BQD1 86 aa18.14■□□□□ 0.49
FOXA1-202ENST00000545425 IGHV7-81A0A0B4J1V7 117 aa18.13■□□□□ 0.49
FOXA1-202ENST00000545425 CTSGP08311 255 aa18.13■□□□□ 0.49
FOXA1-202ENST00000545425 NDPQ00604 133 aa18.13■□□□□ 0.49
FOXA1-202ENST00000545425 LINC01545Q5VT33 79 aa18.13■□□□□ 0.49
FOXA1-202ENST00000545425 PRR25Q96S07 402 aa18.13■□□□□ 0.49
FOXA1-202ENST00000545425 RBAKDNA6NC62 111 aa18.12■□□□□ 0.49
FOXA1-202ENST00000545425 M0R3E3 92 aa18.12■□□□□ 0.49
FOXA1-202ENST00000545425 SH2D1AO60880 128 aa18.12■□□□□ 0.49
FOXA1-202ENST00000545425 DPF1Q92782 380 aa18.12■□□□□ 0.49
FOXA1-202ENST00000545425 CREBBPQ92793 2442 aa18.12■□□□□ 0.49
FOXA1-202ENST00000545425 FAM104BQ5XKR9 115 aa18.12■□□□□ 0.49
FOXA1-202ENST00000545425 Q8N9W7 124 aa18.12■□□□□ 0.49
FOXA1-202ENST00000545425 PRSS3P2Q8NHM4 247 aa18.12■□□□□ 0.49
FOXA1-202ENST00000545425 TMUB1Q9BVT8 246 aa18.12■□□□□ 0.49
FOXA1-202ENST00000545425 NPFFR1Q9GZQ6 430 aa18.12■□□□□ 0.49
FOXA1-202ENST00000545425 IGHV2-70DA0A0C4DH43 119 aa18.11■□□□□ 0.49
FOXA1-202ENST00000545425 LY6HO94772 140 aa18.11■□□□□ 0.49
FOXA1-202ENST00000545425 EGR2P11161 476 aaPredicted RBP18.11■□□□□ 0.49
FOXA1-202ENST00000545425 STPG4Q8N801 248 aa18.11■□□□□ 0.49
FOXA1-202ENST00000545425 RELQ04864 619 aaPredicted RBP18.1■□□□□ 0.49
FOXA1-202ENST00000545425 ORMDL3Q8N138 153 aa18.1■□□□□ 0.49
FOXA1-202ENST00000545425 SLC50A1Q9BRV3 221 aa18.1■□□□□ 0.49
FOXA1-202ENST00000545425 LRBAP50851 2863 aa18.1■□□□□ 0.49
FOXA1-202ENST00000545425 CD24P25063 80 aa18.09■□□□□ 0.49
FOXA1-202ENST00000545425 SLC25A34Q6PIV7 304 aa18.09■□□□□ 0.49
FOXA1-202ENST00000545425 DYNAPQ8N1N2 210 aa18.09■□□□□ 0.49
FOXA1-202ENST00000545425 ZNF502Q8TBZ5 544 aa18.09■□□□□ 0.49
FOXA1-202ENST00000545425 C8orf49Q96NF6 230 aa18.09■□□□□ 0.49
FOXA1-202ENST00000545425 FBN2P35556 2912 aa18.09■□□□□ 0.49
FOXA1-202ENST00000545425 M0QZ24 198 aa18.09■□□□□ 0.49
FOXA1-202ENST00000545425 MAJINQ3KP22 176 aa18.09■□□□□ 0.49
FOXA1-202ENST00000545425 LYZL1Q6UWQ5 148 aa18.09■□□□□ 0.49
FOXA1-202ENST00000545425 MRPL53Q96EL3 112 aaKnown RBP18.09■□□□□ 0.49
FOXA1-202ENST00000545425 ANKHD1Q8IWZ3 2542 aaKnown RBP18.08■□□□□ 0.49
FOXA1-202ENST00000545425 OR2T8A6NH00 312 aa18.08■□□□□ 0.48
FOXA1-202ENST00000545425 GOSR1O95249 250 aa18.08■□□□□ 0.48
FOXA1-202ENST00000545425 EFNA4P52798 201 aa18.08■□□□□ 0.48
FOXA1-202ENST00000545425 ZNF747Q9BV97 191 aa18.08■□□□□ 0.48
FOXA1-202ENST00000545425 PPP1R14DQ9NXH3 145 aa18.08■□□□□ 0.48
FOXA1-202ENST00000545425 DCHS2Q6V1P9 2916 aa18.08■□□□□ 0.48
FOXA1-202ENST00000545425 A0A1W2PRD5 423 aa18.07■□□□□ 0.48
FOXA1-202ENST00000545425 A0A1W2PRF3 423 aa18.07■□□□□ 0.48
FOXA1-202ENST00000545425 A0A1W2PRM7 423 aa18.07■□□□□ 0.48
FOXA1-202ENST00000545425 PPBPP02775 128 aa18.07■□□□□ 0.48
FOXA1-202ENST00000545425 PSMG4Q5JS54 123 aa18.07■□□□□ 0.48
FOXA1-202ENST00000545425 MYO9AB2RTY4 2548 aa18.07■□□□□ 0.48
FOXA1-202ENST00000545425 CNFNQ9BYD5 112 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms