RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 YTHDF2Q9Y5A9 579 aaKnown RBP8.89□□□□□ -0.99
DDB1-223ENST00000543658 TRAV8-2A0A0B4J237 113 aa8.88□□□□□ -0.99
DDB1-223ENST00000543658 CD7P09564 240 aa8.88□□□□□ -0.99
DDB1-223ENST00000543658 HLA-DMBP28068 263 aa8.88□□□□□ -0.99
DDB1-223ENST00000543658 EGFEM1PQ0D2K5 195 aa8.88□□□□□ -0.99
DDB1-223ENST00000543658 TOR2AQ5JU69 321 aa8.88□□□□□ -0.99
DDB1-223ENST00000543658 OR10J6PQ8NGY7 276 aa8.88□□□□□ -0.99
DDB1-223ENST00000543658 RPUSD4Q96CM3 377 aaKnown RBP8.88□□□□□ -0.99
DDB1-223ENST00000543658 PRR25Q96S07 402 aa8.88□□□□□ -0.99
DDB1-223ENST00000543658 FAM110AQ9BQ89 295 aa8.88□□□□□ -0.99
DDB1-223ENST00000543658 TCEAL7Q9BRU2 100 aa8.88□□□□□ -0.99
DDB1-223ENST00000543658 VAX2Q9UIW0 290 aa8.88□□□□□ -0.99
DDB1-223ENST00000543658 NOTCH3Q9UM47 2321 aa8.87□□□□□ -0.99
DDB1-223ENST00000543658 SERTM2A0A1B0GWG4 89 aa8.87□□□□□ -0.99
DDB1-223ENST00000543658 RBFOX3A6NFN3 312 aa8.87□□□□□ -0.99
DDB1-223ENST00000543658 GGTLC3B5MD39 225 aa8.87□□□□□ -0.99
DDB1-223ENST00000543658 M0R3E3 92 aa8.87□□□□□ -0.99
DDB1-223ENST00000543658 ATP5G3P48201 142 aa8.87□□□□□ -0.99
DDB1-223ENST00000543658 MEF2BQ02080 365 aaPredicted RBP8.87□□□□□ -0.99
DDB1-223ENST00000543658 PMS2P11Q13670 270 aa8.87□□□□□ -0.99
DDB1-223ENST00000543658 ODF3L2Q3SX64 289 aa8.87□□□□□ -0.99
DDB1-223ENST00000543658 STHQ8IWL8 128 aa8.87□□□□□ -0.99
DDB1-223ENST00000543658 C20orf173Q96LM9 149 aa8.87□□□□□ -0.99
DDB1-223ENST00000543658 FAM210AQ96ND0 272 aa8.87□□□□□ -0.99
DDB1-223ENST00000543658 PPP1R14DQ9NXH3 145 aa8.87□□□□□ -0.99
DDB1-223ENST00000543658 VWFP04275 2813 aa8.86□□□□□ -0.99
DDB1-223ENST00000543658 LOC102723971A0A1B0GUV8 181 aa8.86□□□□□ -0.99
DDB1-223ENST00000543658 ZNF705FA8MVS1 300 aaPredicted RBP8.86□□□□□ -0.99
DDB1-223ENST00000543658 PDE6DO43924 150 aa8.86□□□□□ -0.99
DDB1-223ENST00000543658 DUSP14O95147 198 aaKnown RBP8.86□□□□□ -0.99
DDB1-223ENST00000543658 AKR1C3P42330 323 aa8.86□□□□□ -0.99
DDB1-223ENST00000543658 GNG5P63218 68 aa8.86□□□□□ -0.99
DDB1-223ENST00000543658 HIST1H1AQ02539 215 aaPredicted RBP8.86□□□□□ -0.99
DDB1-223ENST00000543658 ACTL10Q5JWF8 245 aa8.86□□□□□ -0.99
DDB1-223ENST00000543658 FOXI2Q6ZQN5 318 aa8.86□□□□□ -0.99
DDB1-223ENST00000543658 APRG1Q8IVJ8 170 aa8.86□□□□□ -0.99
DDB1-223ENST00000543658 ARL6IP6Q8N6S5 226 aa8.86□□□□□ -0.99
DDB1-223ENST00000543658 HIST1H2BAQ96A08 127 aa8.86□□□□□ -0.99
DDB1-223ENST00000543658 ATG101Q9BSB4 218 aa8.86□□□□□ -0.99
DDB1-223ENST00000543658 TRRAPQ9Y4A5 3859 aa8.85□□□□□ -0.99
DDB1-223ENST00000543658 DIRC3C9JPN6 131 aa8.85□□□□□ -0.99
DDB1-223ENST00000543658 PEX7O00628 323 aa8.85□□□□□ -0.99
DDB1-223ENST00000543658 UBE2G1P62253 170 aa8.85□□□□□ -0.99
DDB1-223ENST00000543658 PEA15Q15121 130 aa8.85□□□□□ -0.99
DDB1-223ENST00000543658 ZNF506Q5JVG8 444 aa8.85□□□□□ -0.99
DDB1-223ENST00000543658 TMEM78Q5T7P6 136 aa8.85□□□□□ -0.99
DDB1-223ENST00000543658 GOLT1AQ6ZVE7 132 aa8.85□□□□□ -0.99
DDB1-223ENST00000543658 CYB561D1Q8N8Q1 229 aa8.85□□□□□ -0.99
DDB1-223ENST00000543658 OR4B1Q8NGF8 309 aa8.85□□□□□ -0.99
DDB1-223ENST00000543658 SAV1Q9H4B6 383 aaPredicted RBP8.85□□□□□ -0.99
DDB1-223ENST00000543658 TUBA4BQ9H853 241 aa8.85□□□□□ -0.99
DDB1-223ENST00000543658 EPDR1Q9UM22 224 aa8.85□□□□□ -0.99
DDB1-223ENST00000543658 AGRNO00468 2067 aa8.85□□□□□ -0.99
DDB1-223ENST00000543658 IGKV2-40A0A087WW87 121 aaPredicted RBP8.84□□□□□ -0.99
DDB1-223ENST00000543658 RBAKDNA6NC62 111 aa8.84□□□□□ -0.99
DDB1-223ENST00000543658 KNCNA6PVL3 124 aa8.84□□□□□ -0.99
DDB1-223ENST00000543658 IGKV2D-40P01614 121 aaPredicted RBP8.84□□□□□ -0.99
DDB1-223ENST00000543658 TCRAP04437 139 aa8.84□□□□□ -0.99
DDB1-223ENST00000543658 HLA-DRB4P13762 266 aa8.84□□□□□ -0.99
DDB1-223ENST00000543658 CNN1P51911 297 aaKnown RBP8.84□□□□□ -0.99
DDB1-223ENST00000543658 KRTAP10-11P60412 298 aa8.84□□□□□ -0.99
DDB1-223ENST00000543658 OR8A1Q8NGG7 326 aa8.84□□□□□ -0.99
DDB1-223ENST00000543658 RARRES2Q99969 163 aa8.84□□□□□ -0.99
DDB1-223ENST00000543658 NDFIP1Q9BT67 221 aa8.84□□□□□ -0.99
DDB1-223ENST00000543658 WFDC10AQ9H1F0 79 aa8.84□□□□□ -0.99
DDB1-223ENST00000543658 SRD5A3Q9H8P0 318 aa8.84□□□□□ -0.99
DDB1-223ENST00000543658 HLA-DRB4X5D2U9 266 aa8.84□□□□□ -0.99
DDB1-223ENST00000543658 A0A0J9YX75 114 aa8.83□□□□□ -1
DDB1-223ENST00000543658 SCO2A0A1W2PP80 73 aa8.83□□□□□ -1
DDB1-223ENST00000543658 RAB19A4D1S5 217 aa8.83□□□□□ -1
DDB1-223ENST00000543658 FBLL1A6NHQ2 334 aaKnown RBP8.83□□□□□ -1
DDB1-223ENST00000543658 F6UB75 175 aa8.83□□□□□ -1
DDB1-223ENST00000543658 CEBPGP53567 150 aa8.83□□□□□ -1
DDB1-223ENST00000543658 ZNF124Q15973 351 aa8.83□□□□□ -1
DDB1-223ENST00000543658 DEFB125Q8N687 156 aa8.83□□□□□ -1
DDB1-223ENST00000543658 FMC1Q96HJ9 113 aa8.83□□□□□ -1
DDB1-223ENST00000543658 TREM1Q9NP99 234 aa8.83□□□□□ -1
DDB1-223ENST00000543658 MED9Q9NWA0 146 aa8.83□□□□□ -1
DDB1-223ENST00000543658 PRAC2D3DTV9 90 aa8.82□□□□□ -1
DDB1-223ENST00000543658 IGKV3-20P01619 116 aa8.82□□□□□ -1
DDB1-223ENST00000543658 S100A9P06702 114 aaKnown RBP8.82□□□□□ -1
DDB1-223ENST00000543658 ZNF705DP0CH99 300 aaPredicted RBP8.82□□□□□ -1
DDB1-223ENST00000543658 ZNF705BP0CI00 300 aaPredicted RBP8.82□□□□□ -1
DDB1-223ENST00000543658 PRB4P10163 310 aaPredicted RBP8.82□□□□□ -1
DDB1-223ENST00000543658 DEFB1P60022 68 aa8.82□□□□□ -1
DDB1-223ENST00000543658 NUTF2P61970 127 aaKnown RBP8.82□□□□□ -1
DDB1-223ENST00000543658 KPRPQ5T749 579 aaPredicted RBP8.82□□□□□ -1
DDB1-223ENST00000543658 COMMD7Q86VX2 200 aa8.82□□□□□ -1
DDB1-223ENST00000543658 CCDC28AQ8IWP9 274 aa8.82□□□□□ -1
DDB1-223ENST00000543658 TMEM75Q8N9X5 138 aa8.82□□□□□ -1
DDB1-223ENST00000543658 LINC00477Q96M19 166 aa8.82□□□□□ -1
DDB1-223ENST00000543658 SMDT1Q9H4I9 107 aa8.82□□□□□ -1
DDB1-223ENST00000543658 NPIPB6E9PJ23 425 aa8.81□□□□□ -1
DDB1-223ENST00000543658 TMEM250H0YL14 139 aa8.81□□□□□ -1
DDB1-223ENST00000543658 H3BMM0 161 aa8.81□□□□□ -1
DDB1-223ENST00000543658 ERCC8Q13216 396 aa8.81□□□□□ -1
DDB1-223ENST00000543658 GDF5OSQ5U4N7 250 aa8.81□□□□□ -1
DDB1-223ENST00000543658 C11orf52Q96A22 123 aa8.81□□□□□ -1
DDB1-223ENST00000543658 C19orf73Q9NVV2 129 aa8.81□□□□□ -1
DDB1-223ENST00000543658 AURKAIP1Q9NWT8 199 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms