RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 PSMB8P28062 276 aa7.21□□□□□ -1.26
GNE-206ENST00000543356 SUMO1P63165 101 aaKnown RBP7.21□□□□□ -1.26
GNE-206ENST00000543356 OR4F17Q8NGA8 305 aa7.21□□□□□ -1.26
GNE-206ENST00000543356 ZANQ9Y493 2812 aa7.21□□□□□ -1.26
GNE-206ENST00000543356 ABCA1O95477 2261 aa7.21□□□□□ -1.26
GNE-206ENST00000543356 CREBBPQ92793 2442 aa7.21□□□□□ -1.26
GNE-206ENST00000543356 RAB9AP51151 201 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 SCGB2A2Q13296 93 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 SMIM12Q96EX1 92 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 KLK15Q9H2R5 256 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 ZNF586Q9NXT0 402 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 TRBV24-1A0A075B6N3 115 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 A4D1N5 150 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 PPP5D1E7EU14 171 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 CRYBB3P26998 211 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 ARL3P36405 182 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 ADIRFQ15847 76 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 BLNKQ8WV28 456 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 TMEM242Q9NWH2 141 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 LY96Q9Y6Y9 160 aa7.2□□□□□ -1.26
GNE-206ENST00000543356 ZNF469Q96JG9 3925 aaPredicted RBP7.19□□□□□ -1.26
GNE-206ENST00000543356 A0A1B0GUS0 222 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 SLC35B1P78383 322 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 TEX43Q6ZNM6 134 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 ERASQ7Z444 233 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 CTDSP1Q9GZU7 261 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 OTORQ9NRC9 128 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 TRBV20OR9-2A0A075B6H5 130 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 TRBV19A0A075B6N1 114 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 CLPSL1A2RUU4 121 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 PEX7O00628 323 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 NUPR1O60356 82 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 RPL7P18124 248 aaKnown RBP7.19□□□□□ -1.26
GNE-206ENST00000543356 RANP62826 216 aaKnown RBP7.19□□□□□ -1.26
GNE-206ENST00000543356 FOXE3Q13461 319 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 PDE6HQ13956 83 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 LYPD1Q8N2G4 141 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 ZNF738Q8NE65 137 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 OR2D3Q8NGH3 330 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 Q9H3A6 140 aa7.19□□□□□ -1.26
GNE-206ENST00000543356 HELTA6NFD8 242 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 DNAJC9-AS1A6NH13 148 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 NDUFA4O00483 81 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 C5orf17Q8NAS9 161 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 OR4X2Q8NGF9 303 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 MYOZ3Q8TDC0 251 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 GPR82Q96P67 336 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 SRD5A3Q9H8P0 318 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 FASNP49327 2511 aaKnown RBP7.18□□□□□ -1.26
GNE-206ENST00000543356 IGHV3-35A0A0C4DH35 117 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 PGPA6NDG6 321 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 CLDN34H7C241 214 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 ELANEP08246 267 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 CD99P14209 185 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 RNF152Q8N8N0 203 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 IGF2BP2-AS1Q96M15 143 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 METTL26Q96S19 204 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 CDC42EP3Q9UKI2 254 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 EPDR1Q9UM22 224 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 U3KQE9 123 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 TEX15Q9BXT5 2789 aa7.18□□□□□ -1.26
GNE-206ENST00000543356 BUB3O43684 328 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 TRBV12-3P01733 135 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 IGHV3-11P01762 117 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 SLC25A5P05141 298 aaKnown RBP7.17□□□□□ -1.26
GNE-206ENST00000543356 GNG4P50150 75 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 CNN1P51911 297 aaKnown RBP7.17□□□□□ -1.26
GNE-206ENST00000543356 CENPWQ5EE01 88 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 SIGLEC15Q6ZMC9 328 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 A0A087X0K7 114 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 H3BTX0 84 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 ZNF253O75346 499 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 SAP30O75446 220 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 LCNL1Q6ZST4 164 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 TMEM256Q8N2U0 113 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 SERTAD4Q9NUC0 356 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 LAMTOR2Q9Y2Q5 125 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 ITPR2Q14571 2701 aa7.17□□□□□ -1.26
GNE-206ENST00000543356 RPL15P61313 204 aaKnown RBP7.16□□□□□ -1.26
GNE-206ENST00000543356 OR8I2Q8N0Y5 310 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 OCC1Q8TAD7 63 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 DUX5Q96PT3 197 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 PEF1Q9UBV8 284 aaKnown RBP7.16□□□□□ -1.26
GNE-206ENST00000543356 SMPXQ9UHP9 88 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 KLF12Q9Y4X4 402 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 FLNAP21333 2647 aaKnown RBP7.16□□□□□ -1.26
GNE-206ENST00000543356 CSPG4Q6UVK1 2322 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 IGHV3OR16-8A0A075B7F1 116 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 SLC17A3O00476 420 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 TCRAP04437 139 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 GNG5P63218 68 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 PSG9Q00887 426 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 TMEM183BQ1AE95 376 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 C10orf99Q6UWK7 81 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 Q6ZWC4 215 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 C17orf77Q96MU5 243 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 CITED2Q99967 270 aaPredicted RBP7.16□□□□□ -1.26
GNE-206ENST00000543356 SMAD5-AS1Q9Y6J3 95 aa7.16□□□□□ -1.26
GNE-206ENST00000543356 HINT1P49773 126 aaPredicted RBP7.15□□□□□ -1.26
GNE-206ENST00000543356 SHISA2Q6UWI4 295 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms