RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 PSG8Q9UQ74 426 aa7.21□□□□□ -1.26
DDB1-211ENST00000538280 TRAV8-1A0A0A6YYK1 113 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 ZNF705FA8MVS1 300 aaPredicted RBP7.2□□□□□ -1.26
DDB1-211ENST00000538280 HAX1O00165 279 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 SMAD7O15105 426 aaKnown RBP7.2□□□□□ -1.26
DDB1-211ENST00000538280 SCGB2A1O75556 95 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 CTSGP08311 255 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 FAM106CPP0CH98 169 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 ZNF705DP0CH99 300 aaPredicted RBP7.2□□□□□ -1.26
DDB1-211ENST00000538280 ZNF705BP0CI00 300 aaPredicted RBP7.2□□□□□ -1.26
DDB1-211ENST00000538280 AMTP48728 403 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 Q56UQ5 140 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 Q5PR19 223 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 FAM120AOSQ5T036 256 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 DMRTA1Q5VZB9 504 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 BCL6BQ8N143 479 aaPredicted RBP7.2□□□□□ -1.26
DDB1-211ENST00000538280 SIGLECL1Q8N7X8 197 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 DAZAP1Q96EP5 407 aaKnown RBP7.2□□□□□ -1.26
DDB1-211ENST00000538280 ZC2HC1AQ96GY0 325 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 LPAR2Q9HBW0 351 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 ANK2Q01484 3957 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 CR1P17927 2039 aa7.2□□□□□ -1.26
DDB1-211ENST00000538280 COL6A5A8TX70 2615 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 A0A087X0K7 114 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 FBLL1A6NHQ2 334 aaKnown RBP7.19□□□□□ -1.26
DDB1-211ENST00000538280 NCBP2LA6PVI3 153 aaKnown RBP7.19□□□□□ -1.26
DDB1-211ENST00000538280 K7EQM0 130 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 SAA4P35542 130 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 CRIP2P52943 208 aaPredicted RBP7.19□□□□□ -1.26
DDB1-211ENST00000538280 PSG9Q00887 426 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 FAM162BQ5T6X4 162 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 TOMM20LQ6UXN7 152 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 PRNTQ86SH4 94 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 MRPL52Q86TS9 123 aaKnown RBP7.19□□□□□ -1.26
DDB1-211ENST00000538280 ZNF502Q8TBZ5 544 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 URB1-AS1Q96HZ7 61 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 BPESC1Q9GZL8 116 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 ZFAND3Q9H8U3 227 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 S4R3C0 116 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 ROS1P08922 2347 aa7.19□□□□□ -1.26
DDB1-211ENST00000538280 CENPVL3A0A0U1RRI6 287 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 SH2D7A6NKC9 451 aaPredicted RBP7.18□□□□□ -1.26
DDB1-211ENST00000538280 NPFFO15130 113 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 IGHV4-39P01824 125 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 C3orf79P0CE67 100 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 RPL7P18124 248 aaKnown RBP7.18□□□□□ -1.26
DDB1-211ENST00000538280 CD33P20138 364 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 PMCHP20382 165 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 CTRLP40313 264 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 CRIP1P50238 77 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 PAX8Q06710 450 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 KRTAP1-1Q07627 177 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 C19orf54Q5BKX5 351 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 CYB5R2Q6BCY4 276 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 OR2D3Q8NGH3 330 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 PGLYRP4Q96LB8 373 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 Q96MF0 132 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 SSBP4Q9BWG4 385 aaPredicted RBP7.18□□□□□ -1.26
DDB1-211ENST00000538280 RABAC1Q9UI14 185 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 SMAD5-AS1Q9Y6J3 95 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 ARHGAP32A7KAX9 2087 aa7.18□□□□□ -1.26
DDB1-211ENST00000538280 LOC102724200A0A096LPH7 203 aaPredicted RBP7.17□□□□□ -1.26
DDB1-211ENST00000538280 A0A1B0GW15 77 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 M0R3E3 92 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 ATP6V0E1O15342 81 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 IGHG4P01861 327 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 S100A7P31151 101 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 CAMPP49913 170 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 Q6AWC8 147 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 PIP4P2Q8N4L2 257 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 C5orf56Q8N8D9 126 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 ATP6V0BQ99437 205 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 NDFIP1Q9BT67 221 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 AAMDCQ9H7C9 122 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 BEX4Q9NWD9 120 aaPredicted RBP7.17□□□□□ -1.26
DDB1-211ENST00000538280 ZMAT5Q9UDW3 170 aaKnown RBP7.17□□□□□ -1.26
DDB1-211ENST00000538280 STAB1Q9NY15 2570 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 MXRA5Q9NR99 2828 aa7.17□□□□□ -1.26
DDB1-211ENST00000538280 ATRQ13535 2644 aa7.16□□□□□ -1.26
DDB1-211ENST00000538280 SONP18583 2426 aaKnown RBP7.16□□□□□ -1.26
DDB1-211ENST00000538280 OR2T8A6NH00 312 aa7.16□□□□□ -1.26
DDB1-211ENST00000538280 EREGO14944 169 aa7.16□□□□□ -1.26
DDB1-211ENST00000538280 IGHV3-23P01764 117 aa7.16□□□□□ -1.26
DDB1-211ENST00000538280 RAB4AP20338 218 aa7.16□□□□□ -1.26
DDB1-211ENST00000538280 RAB9AP51151 201 aa7.16□□□□□ -1.26
DDB1-211ENST00000538280 KRTDAPP60985 99 aa7.16□□□□□ -1.26
DDB1-211ENST00000538280 SRSF2Q01130 221 aaKnown RBP7.16□□□□□ -1.26
DDB1-211ENST00000538280 RIGQ13278 110 aa7.16□□□□□ -1.26
DDB1-211ENST00000538280 TDRG1Q3Y452 100 aa7.16□□□□□ -1.26
DDB1-211ENST00000538280 UNQ5815/PRO19632Q6UWF5 114 aa7.16□□□□□ -1.26
DDB1-211ENST00000538280 ZNF493Q6ZR52 646 aa7.16□□□□□ -1.26
DDB1-211ENST00000538280 CHCHD1Q96BP2 118 aaKnown RBP7.16□□□□□ -1.26
DDB1-211ENST00000538280 VAMP8Q9BV40 100 aa7.16□□□□□ -1.26
DDB1-211ENST00000538280 HIVEP2P31629 2446 aa7.15□□□□□ -1.26
DDB1-211ENST00000538280 A0A1B0GUT8 65 aa7.15□□□□□ -1.26
DDB1-211ENST00000538280 CLPSL1A2RUU4 121 aa7.15□□□□□ -1.26
DDB1-211ENST00000538280 FAM181BA6NEQ2 426 aa7.15□□□□□ -1.26
DDB1-211ENST00000538280 C2orf70A6NJV1 201 aa7.15□□□□□ -1.26
DDB1-211ENST00000538280 NDUFS8O00217 210 aa7.15□□□□□ -1.26
DDB1-211ENST00000538280 CHEK1O14757 476 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms