RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 PHF5AQ7RTV0 110 aaKnown RBP0.14□□□□□ -2.39
CCDC7-208ENST00000537047 NUP35Q8NFH5 326 aa0.14□□□□□ -2.39
CCDC7-208ENST00000537047 PXT1Q8NFP0 134 aa0.14□□□□□ -2.39
CCDC7-208ENST00000537047 CHMP6Q96FZ7 201 aa0.14□□□□□ -2.39
CCDC7-208ENST00000537047 RMND5BQ96G75 393 aaPredicted RBP0.14□□□□□ -2.39
CCDC7-208ENST00000537047 FAM103A1Q9BTL3 118 aaKnown RBP0.14□□□□□ -2.39
CCDC7-208ENST00000537047 PBDC1Q9BVG4 233 aa0.14□□□□□ -2.39
CCDC7-208ENST00000537047 ASB4Q9Y574 426 aa0.14□□□□□ -2.39
CCDC7-208ENST00000537047 MUC12Q9UKN1 5478 aa0.14□□□□□ -2.39
CCDC7-208ENST00000537047 MUC2Q02817 5179 aa0.14□□□□□ -2.39
CCDC7-208ENST00000537047 NISCHQ9Y2I1 1504 aa0.13□□□□□ -2.39
CCDC7-208ENST00000537047 TRPM1Q7Z4N2 1603 aa0.13□□□□□ -2.39
CCDC7-208ENST00000537047 ARF6P62330 175 aa0.13□□□□□ -2.39
CCDC7-208ENST00000537047 C1orf140Q5VVS0 124 aa0.13□□□□□ -2.39
CCDC7-208ENST00000537047 FOXI2Q6ZQN5 318 aa0.13□□□□□ -2.39
CCDC7-208ENST00000537047 FAM216BQ8N7L0 139 aa0.13□□□□□ -2.39
CCDC7-208ENST00000537047 PLAC4Q8WY50 150 aa0.13□□□□□ -2.39
CCDC7-208ENST00000537047 CST11Q9H112 138 aa0.13□□□□□ -2.39
CCDC7-208ENST00000537047 FANCMQ8IYD8 2048 aa0.13□□□□□ -2.39
CCDC7-208ENST00000537047 CAMSAP1Q5T5Y3 1602 aa0.13□□□□□ -2.39
CCDC7-208ENST00000537047 TTC28Q96AY4 2481 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 CAMSAP2Q08AD1 1489 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 A6NN06 94 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 K7ERJ3 54 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 IFNA1P01562 189 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 PDE6GP18545 87 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 PPP1R2P41236 205 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 HBBP68871 147 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 QRFPP83859 136 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 DIAPH2-AS1Q14236 149 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 MSMO1Q15800 293 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 SNCBQ16143 134 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 Q86TA4 180 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 C10orf111Q8N326 155 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 OR13C6PQ8NH95 151 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 GRPEL2Q8TAA5 225 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 CCL19Q99731 98 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 RTL8AQ9BWD3 113 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 OR2H1Q9GZK4 316 aa0.12□□□□□ -2.39
CCDC7-208ENST00000537047 TNCP24821 2201 aa0.11□□□□□ -2.39
CCDC7-208ENST00000537047 KMT2CQ8NEZ4 4911 aaKnown RBP0.11□□□□□ -2.39
CCDC7-208ENST00000537047 ODAMA1E959 279 aa0.11□□□□□ -2.39
CCDC7-208ENST00000537047 ATP5HO75947 161 aa0.11□□□□□ -2.39
CCDC7-208ENST00000537047 CST7O76096 145 aa0.11□□□□□ -2.39
CCDC7-208ENST00000537047 RPL35P42766 123 aaKnown RBP0.11□□□□□ -2.39
CCDC7-208ENST00000537047 VMA21Q3ZAQ7 101 aa0.11□□□□□ -2.39
CCDC7-208ENST00000537047 FKBP1CQ5VVH2 108 aa0.11□□□□□ -2.39
CCDC7-208ENST00000537047 HACD4Q5VWC8 232 aa0.11□□□□□ -2.39
CCDC7-208ENST00000537047 SPINK6Q6UWN8 80 aa0.11□□□□□ -2.39
CCDC7-208ENST00000537047 LAMTOR3Q9UHA4 124 aa0.11□□□□□ -2.39
CCDC7-208ENST00000537047 NUP210LQ5VU65 1888 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 IGHV3-30P01768 117 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 IGHV3-30-5P0DP03 117 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 RPL37AP61513 92 aaKnown RBP0.1□□□□□ -2.39
CCDC7-208ENST00000537047 MRPS36P82909 103 aaKnown RBP0.1□□□□□ -2.39
CCDC7-208ENST00000537047 RTL8BQ17RB0 113 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 CROCCP2Q86T23 111 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 PRR15Q8IV56 129 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 LINC00269Q8N2A0 174 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 C5orf17Q8NAS9 161 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 NEK7Q8TDX7 302 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 MCEEQ96PE7 176 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 GINS3Q9BRX5 216 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 EFCAB11Q9BUY7 163 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 TPRKBQ9Y3C4 175 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 PTPRDP23468 1912 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 CD109Q6YHK3 1445 aa0.1□□□□□ -2.39
CCDC7-208ENST00000537047 RTL9Q8NET4 1388 aa0.09□□□□□ -2.39
CCDC7-208ENST00000537047 H3BQV1 296 aa0.09□□□□□ -2.4
CCDC7-208ENST00000537047 SULT1C4O75897 302 aa0.09□□□□□ -2.4
CCDC7-208ENST00000537047 PIAS1O75925 651 aa0.09□□□□□ -2.4
CCDC7-208ENST00000537047 CAV3P56539 151 aa0.09□□□□□ -2.4
CCDC7-208ENST00000537047 RPL19P84098 196 aaKnown RBP0.09□□□□□ -2.4
CCDC7-208ENST00000537047 C10orf99Q6UWK7 81 aa0.09□□□□□ -2.4
CCDC7-208ENST00000537047 CASC2Q6XLA1 102 aa0.09□□□□□ -2.4
CCDC7-208ENST00000537047 TMED4Q7Z7H5 227 aa0.09□□□□□ -2.4
CCDC7-208ENST00000537047 ZGRF1Q86YA3 2104 aa0.09□□□□□ -2.4
CCDC7-208ENST00000537047 PLEKHB2Q96CS7 222 aa0.09□□□□□ -2.4
CCDC7-208ENST00000537047 OR4C12Q96R67 309 aa0.09□□□□□ -2.4
CCDC7-208ENST00000537047 LIMD2Q9BT23 127 aa0.09□□□□□ -2.4
CCDC7-208ENST00000537047 FRMPD1Q5SYB0 1578 aa0.09□□□□□ -2.4
CCDC7-208ENST00000537047 SYNE1Q8NF91 8797 aaKnown RBP0.09□□□□□ -2.4
CCDC7-208ENST00000537047 ANKRD17O75179 2603 aaKnown RBP0.08□□□□□ -2.4
CCDC7-208ENST00000537047 KPNA4O00629 521 aaPredicted RBP0.08□□□□□ -2.4
CCDC7-208ENST00000537047 MT-ND6P03923 174 aa0.08□□□□□ -2.4
CCDC7-208ENST00000537047 MRPS15P82914 257 aaKnown RBP0.08□□□□□ -2.4
CCDC7-208ENST00000537047 POU6F1Q14863 301 aa0.08□□□□□ -2.4
CCDC7-208ENST00000537047 SS18L2Q9UHA2 77 aa0.08□□□□□ -2.4
CCDC7-208ENST00000537047 NAT8BQ9UHF3 227 aa0.08□□□□□ -2.4
CCDC7-208ENST00000537047 STOML2Q9UJZ1 356 aa0.08□□□□□ -2.4
CCDC7-208ENST00000537047 RYR2Q92736 4967 aa0.08□□□□□ -2.4
CCDC7-208ENST00000537047 PIK3C2AO00443 1686 aa0.08□□□□□ -2.4
CCDC7-208ENST00000537047 N4BP2Q86UW6 1770 aaPredicted RBP0.07□□□□□ -2.4
CCDC7-208ENST00000537047 KIAA1107Q9UPP5 1409 aa0.07□□□□□ -2.4
CCDC7-208ENST00000537047 MFSD11O43934 449 aa0.07□□□□□ -2.4
CCDC7-208ENST00000537047 CSN2P05814 226 aa0.07□□□□□ -2.4
CCDC7-208ENST00000537047 FABP4P15090 132 aa0.07□□□□□ -2.4
CCDC7-208ENST00000537047 NEDD8Q15843 81 aa0.07□□□□□ -2.4
CCDC7-208ENST00000537047 SPINK13Q1W4C9 94 aa0.07□□□□□ -2.4
CCDC7-208ENST00000537047 ZCCHC23Q6ZST2 131 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms