RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 IGHV1-69P01742 117 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 FOXE3Q13461 319 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 PIK3CD-AS1Q5SR53 167 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 C10orf55Q5SWW7 151 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 GAGE2AQ6NT46 116 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 LINC00643Q86TS7 51 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 DAND5Q8N907 189 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 UBE2WQ96B02 151 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 MOB4Q9Y3A3 225 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 TNFRSF18Q9Y5U5 241 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 RLFQ13129 1914 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 IGHV3OR15-7A0A075B7D8 119 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 TRAV26-1A0A087WT03 109 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 WT1P19544 449 aaPredicted RBP3.21□□□□□ -1.9
SOX6-217ENST00000533870 KNTC1P50748 2209 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 C11orf86A6NJI1 115 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 P0DMU3 169 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 FAM231AP0DMU4 169 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 FAM231CP0DMU5 169 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 CCL3L1P16619 93 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 PRSS57Q6UWY2 283 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 ANKRD29Q8N6D5 301 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 C11orf44Q8N8P7 122 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 PLXNA3P51805 1871 aa3.21□□□□□ -1.9
SOX6-217ENST00000533870 SNAI2O43623 268 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 IGKV1-16P04430 117 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 PDE6GP18545 87 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 A0A0J9YX75 114 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 BUB1B-PAK6H3BSN5 160 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 H3BVH4 76 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 I3L2K1 104 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 J3KT08 172 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 NDUFA4O00483 81 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 ZNF134P52741 427 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 FAM120AOSQ5T036 256 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 ODF3Q96PU9 254 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 COL4A3Q01955 1670 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 CACNA1HO95180 2353 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 NUP214P35658 2090 aaPredicted RBP3.2□□□□□ -1.9
SOX6-217ENST00000533870 TRBV10-2A0A0K0K1G8 114 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 PINLYPA6NC86 204 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 TSPAN13O95857 204 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 Q0VFX4 171 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 DTX2Q86UW9 622 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 NPBQ8NG41 125 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 JMJD8Q96S16 334 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 IGKV1OR2-108A0A075B7D4 117 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 LY6G6EA0A0G2JKS1 128 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 WI2-2373I1.2A0A1W2PRP0 233 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 ZC2HC1AQ96GY0 325 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 LAMTOR3Q9UHA4 124 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 U3KQA8 63 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 TRIP11Q15643 1979 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 TIMM17BO60830 172 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 DAZAP2Q15038 168 aaPredicted RBP3.2□□□□□ -1.9
SOX6-217ENST00000533870 TIMM21Q9BVV7 248 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 TRBV6-5A0A0K0K1A5 114 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 HERV-K104P63124 156 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 FAM222AQ5U5X8 452 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 TMEM86BQ8N661 226 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 ZMAT4Q9H898 229 aa3.2□□□□□ -1.9
SOX6-217ENST00000533870 SPAG17Q6Q759 2223 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 CABIN1Q9Y6J0 2220 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 DICER1Q9UPY3 1922 aaKnown RBP3.19□□□□□ -1.9
SOX6-217ENST00000533870 TRAV40A0A0B4J280 105 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 TRACP01848 142 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 FXYD2P54710 66 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 EBI3Q14213 229 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 MAJINQ3KP22 176 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 TMEM200BQ69YZ2 307 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 NUMA1Q14980 2115 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 ZNF318Q5VUA4 2279 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 CELA3BP08861 270 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 RPL11P62913 178 aaKnown RBP3.19□□□□□ -1.9
SOX6-217ENST00000533870 MEIG1Q5JSS6 88 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 FAM168AQ92567 244 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 ARRDC1-AS1Q9H2J1 176 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 IGLV11-55A0A075B6I3 123 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 H3BTX0 84 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 BRI3O95415 125 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 CNTFRP26992 372 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 PAX8Q06710 450 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 PRR30Q53SZ7 412 aaPredicted RBP3.19□□□□□ -1.9
SOX6-217ENST00000533870 CFAP126Q5VTH2 177 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 MUC7Q8TAX7 377 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 SPAG8Q99932 426 aaPredicted RBP3.19□□□□□ -1.9
SOX6-217ENST00000533870 IGKV1D-37A0A075B6S9 117 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 TMEM213A2RRL7 107 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 PRSS29PA6NIE9 313 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 UBE2E1P51965 193 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 ZNF56Q15929 161 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 ECSCRQ19T08 205 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 CLUHP3Q96NS8 147 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 AGPAT4-IT1Q9H0P7 198 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 DAZ1Q9NQZ3 744 aaKnown RBP3.19□□□□□ -1.9
SOX6-217ENST00000533870 TRAV41A0A0B4J266 112 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 K7EIM0 57 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 K7EMT4 169 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 EXOC3-AS1Q8N2X6 119 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 NTN5Q8WTR8 489 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms