RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	TMEM256-PLSCR3	K7ERE1	68 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SOD1	P00441	154 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ZNF136	P52737	540 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967		Q0VG73	95 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	GTSF1	Q8WW33	167 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	C6orf106	Q9H6K1	298 aa	Predicted RBP	3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	FGF22	Q9HCT0	170 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SPCS1	Q9Y6A9	102 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	NLRC5	Q86WI3	1866 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TRAV13-1	A0A0B4J241	112 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967		A8MWV9	139 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	HMGA2	P52926	109 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	MORN3	Q6PF18	240 aa	Predicted RBP	3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	RPS27L	Q71UM5	84 aa	Known RBP	3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CAMK2N1	Q7Z7J9	78 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	OR10AG1	Q8NH19	301 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ATP6V0E2	Q8NHE4	81 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SLC35B3	Q9H1N7	401 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	MT-ND6	P03923	174 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	PRM2	P04554	102 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ZNF32	P17041	273 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	LINC00205	P59089	165 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	C12orf73	Q69YU5	71 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SLC25A42	Q86VD7	318 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	C10orf111	Q8N326	155 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TOMM5	Q8N4H5	51 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	OR10G2	Q8NGC3	310 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	OR8A1	Q8NGG7	326 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	RMI2	Q96E14	147 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SPANXD	Q9BXN6	97 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	C8orf17	Q9NRJ1	99 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	IL36B	Q9NZH7	164 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	NUP205	Q92621	2012 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	MYO16	Q9Y6X6	1858 aa		3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TNRC6A	Q8NDV7	1962 aa	Known RBP	3.74	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CCDC88C	Q9P219	2028 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	PAPPA2	Q9BXP8	1791 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	GOLGB1	Q14789	3259 aa	Known RBP	3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	IGHV3-13	P01766	116 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CXCL5	P42830	114 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	RPL30	P62888	115 aa	Known RBP	3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	QRFP	P83859	136 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967		Q8N7P7	452 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	OR10AC1	Q8NH08	325 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	RPL36AL	Q969Q0	106 aa	Known RBP	3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ZNF581	Q9P0T4	197 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	MPC1	Q9Y5U8	109 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	MYO10	Q9HD67	2058 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	PLXNB3	Q9ULL4	1909 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SCN1A	P35498	2009 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	HMCN1	Q96RW7	5635 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TRBV20-1	A0A075B6N2	111 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	IGHV3OR15-7	A0A075B7D8	119 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	MUC21	A0A0G2JKD1	596 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	MUC21	A0A140T8X8	626 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ZNF324	O75467	553 aa	Predicted RBP	3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TCRA	P04437	139 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TAS2R45	P59539	299 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	GNB2	P62879	340 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	PMCHL1	Q16048	86 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	DAND5	Q8N907	189 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CMTM2	Q8TAZ6	248 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ZNF580	Q9UK33	172 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	MCM3AP	O60318	1980 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	EML6	Q6ZMW3	1958 aa		3.73	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TMEM262	E9PQX1	116 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	S100A4	P26447	101 aa	Known RBP	3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CMC4	P56277	68 aa	Predicted RBP	3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	HBB	P68871	147 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ZNF876P	Q49A33	203 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	C9orf153	Q5TBE3	101 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	KRTAP5-3	Q6L8H2	238 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	C22orf39	Q6P5X5	142 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	PHF5A	Q7RTV0	110 aa	Known RBP	3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ATOH7	Q8N100	152 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	C10orf126	Q8N4M7	172 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	C20orf203	Q8NBC4	194 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	OR10P1	Q8NGE3	313 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ELSPBP1	Q96BH3	223 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	DPH3	Q96FX2	82 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ZNF414	Q96IQ9	312 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	B9D2	Q9BPU9	175 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CELA1	Q9UNI1	258 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	IGLV7-46	A0A075B6I9	117 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TRAV14DV4	A0A0A6YYC5	116 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967		A0A1B0GW54	56 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967		A0A1W2PPM0	123 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SOCS1	O15524	211 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SLC25A14	O95258	325 aa	Predicted RBP	3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CSN1S1	P47710	185 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	NMU	P48645	174 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	UBE2B	P63146	152 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	LINC01554	Q52M75	96 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	OR4X2	Q8NGF9	303 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SMIM4	Q8WVI0	70 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TVP23C	Q96ET8	276 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	OR5V1	Q9UGF6	321 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	PLXNA4	Q9HCM2	1894 aa		3.72	□□□□□ -1.81
ECHDC1-222	ENST00000531967	IGLV1-50	A0A075B6I6	118 aa		3.71	□□□□□ -1.81
ECHDC1-222	ENST00000531967	IGHV3-66	A0A0C4DH42	116 aa		3.71	□□□□□ -1.81

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