RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 COL12A1Q99715 3063 aa1.12□□□□□ -2.23
CD44-234ENST00000531873 NUP210LQ5VU65 1888 aa1.12□□□□□ -2.23
CD44-234ENST00000531873 CCDC141Q6ZP82 1450 aa1.12□□□□□ -2.23
CD44-234ENST00000531873 CRYBG3Q68DQ2 2970 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 CLTCL1P53675 1640 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 PTPRQQ9UMZ3 2332 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 ANKRD36BQ8N2N9 1353 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 DMXL1Q9Y485 3027 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 TMEM212A6NML5 194 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 M0R378 163 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 CYB5BO43169 146 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 ATG12O94817 140 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 CRPP02741 224 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 AKR1C3P42330 323 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 TAS2R41P59536 307 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 VBP1P61758 197 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 RHOBP62745 196 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 GNG3P63215 75 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 ELOBQ15370 118 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 LYRM7Q5U5X0 104 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 OR4D11Q8NGI4 311 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 NEK7Q8TDX7 302 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 FAM172AQ8WUF8 416 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 GINS3Q9BRX5 216 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 IMUPQ9GZP8 106 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 MIXL1Q9H2W2 232 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 UFC1Q9Y3C8 167 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 SSC5DA1L4H1 1573 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 TENM1Q9UKZ4 2725 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 COL24A1Q17RW2 1714 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 MYO5AQ9Y4I1 1855 aaKnown RBP1.11□□□□□ -2.23
CD44-234ENST00000531873 LOC400499M0QZD8 3231 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 DNAH14Q0VDD8 3507 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 LAMB2P55268 1798 aa1.11□□□□□ -2.23
CD44-234ENST00000531873 CPDO75976 1380 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 OTOGLQ3ZCN5 2332 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 ZFHX3Q15911 3703 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 UBR1Q8IWV7 1749 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 RIC1Q4ADV7 1423 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 TRGV2A0A075B6R0 118 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 MEIKINA0A087WXM9 373 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 TRBV6-5A0A0K0K1A5 114 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 TAX1BP3O14907 124 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 OR2T1O43869 369 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 MFSD11O43934 449 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 IFNA7P01567 189 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 EIF5AP63241 154 aaKnown RBP1.1□□□□□ -2.23
CD44-234ENST00000531873 POU6F1Q14863 301 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 TSNQ15631 228 aaKnown RBP1.1□□□□□ -2.23
CD44-234ENST00000531873 AKR1C8PQ5T2L2 129 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 C15orf53Q8NAA6 179 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 HIST1H2BLQ99880 126 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 SLC50A1Q9BRV3 221 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 TMEM126AQ9H061 195 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 SH3BGRL3Q9H299 93 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 NCOA6Q14686 2063 aaPredicted RBP1.1□□□□□ -2.23
CD44-234ENST00000531873 RBBP6Q7Z6E9 1792 aaKnown RBP1.1□□□□□ -2.23
CD44-234ENST00000531873 LAMC1P11047 1609 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 UTP20O75691 2785 aaKnown RBP1.1□□□□□ -2.23
CD44-234ENST00000531873 MRC1P22897 1456 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 MBD5Q9P267 1494 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 TAF1LQ8IZX4 1826 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 COL4A1P02462 1669 aa1.1□□□□□ -2.23
CD44-234ENST00000531873 CHD3Q12873 2000 aaKnown RBP1.1□□□□□ -2.23
CD44-234ENST00000531873 LRRIQ1Q96JM4 1722 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 ADGRB1O14514 1584 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 POLEQ07864 2286 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 NAIPQ13075 1403 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 TRPM1Q7Z4N2 1603 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 PIAS1O75925 651 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 NDUFC2O95298 119 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 ASAH2BP0C7U1 165 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 MIFP14174 115 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 PHBP35232 272 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 OR13C6PQ8NH95 151 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 OR10J5Q8NHC4 309 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 ZNF563Q8TA94 476 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 LYSMD1Q96S90 227 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 BOLA2Q9H3K6 86 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 LYRM2Q9NU23 88 aaPredicted RBP1.09□□□□□ -2.23
CD44-234ENST00000531873 TAS2R4Q9NYW5 299 aa1.09□□□□□ -2.23
CD44-234ENST00000531873 PLXNA4Q9HCM2 1894 aa1.09□□□□□ -2.24
CD44-234ENST00000531873 PDZD2O15018 2839 aa1.09□□□□□ -2.24
CD44-234ENST00000531873 PARP4Q9UKK3 1724 aaKnown RBP1.09□□□□□ -2.24
CD44-234ENST00000531873 SMG1Q96Q15 3661 aaKnown RBP1.09□□□□□ -2.24
CD44-234ENST00000531873 PLXNC1O60486 1568 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 CDC42BPGQ6DT37 1551 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 KIDINS220Q9ULH0 1771 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 ZFC3H1O60293 1989 aaKnown RBP1.08□□□□□ -2.24
CD44-234ENST00000531873 KIAA1549Q9HCM3 1950 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 NUP98P52948 1817 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 LRBAP50851 2863 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 TRAV3A0A0B4J244 114 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 TRAV1-1A0A0B4J248 108 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 C7orf71A4D174 169 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 LOC730098B7Z3J9 87 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 G3V2T6 193 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 H7C1C5 153 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 FABP1P07148 127 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 SRP14P37108 136 aaKnown RBP1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms