RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 LRTM2Q8N967 370 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 OR4D5Q8NGN0 318 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 OCC1Q8TAD7 63 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 C15orf40Q8WUR7 153 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 AP3S1Q92572 193 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 SLC35E1Q96K37 410 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 PRRT1Q99946 306 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 ATG101Q9BSB4 218 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 UPK3BQ9BT76 320 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 SHANK2-AS3Q9BTD1 123 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 Q9H3A6 140 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 SLC25A22Q9H936 323 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 VCX3AQ9NNX9 186 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 SCRT2Q9NQ03 307 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 CACFD1Q9UGQ2 172 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 TMED3Q9Y3Q3 217 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 VPS13BQ7Z7G8 4022 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 DNAH8Q96JB1 4490 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 TRAV26-1A0A087WT03 109 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 A0A087X0K7 114 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 PRAC2D3DTV9 90 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 L7N2F9 121 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 CCNKO75909 580 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 ATP5G1P05496 136 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 SLC25A6P12236 298 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 AKR1C4P17516 323 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 ORM2P19652 201 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 FUSP35637 526 aaKnown RBP eCLIP3.1□□□□□ -1.91
CTNND1-226ENST00000530720 GALR1P47211 349 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 ATP5G3P48201 142 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 CCL18P55774 89 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 XGP55808 180 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 TAS2R60P59551 318 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 PLP1P60201 277 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 GAGE2BQ13066 116 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 ESRGQ1W209 222 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 GAGE2EQ4V326 116 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 PRR27Q6MZM9 219 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 GAGE2AQ6NT46 116 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 PATE2Q6UY27 113 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 ACOT7LQ6ZUV0 252 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 OR8A1Q8NGG7 326 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 OR1B1Q8NGR6 318 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 DYNC2LI1Q8TCX1 351 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 DAZAP1Q96EP5 407 aaKnown RBP3.1□□□□□ -1.91
CTNND1-226ENST00000530720 C16orf74Q96GX8 76 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 UHRF2Q96PU4 802 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 TMEM208Q9BTX3 173 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 PARD6GQ9BYG4 376 aaPredicted RBP3.1□□□□□ -1.91
CTNND1-226ENST00000530720 SLIRPQ9GZT3 109 aaKnown RBP3.1□□□□□ -1.91
CTNND1-226ENST00000530720 Q9H8V8 135 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 GAGE2DQ9UEU5 116 aa3.1□□□□□ -1.91
CTNND1-226ENST00000530720 LINC00854A0A1B0GVQ3 168 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 DUXBA0A1W2PPF3 345 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 H3BP45 60 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 K7EPK0 472 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 ZNF701M0R085 212 aaPredicted RBP3.09□□□□□ -1.91
CTNND1-226ENST00000530720 SLC17A3O00476 420 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 RGS5O15539 181 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 SYNGR2O43760 224 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 DUSP14O95147 198 aaKnown RBP3.09□□□□□ -1.91
CTNND1-226ENST00000530720 CFDP00746 253 aaPredicted RBP3.09□□□□□ -1.91
CTNND1-226ENST00000530720 FABP1P07148 127 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 B2MP61769 119 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 SRPXP78539 464 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 HIST1H1AQ02539 215 aaPredicted RBP3.09□□□□□ -1.91
CTNND1-226ENST00000530720 PPP1R1AQ13522 171 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 IL18Q14116 193 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 GFI1BQ5VTD9 330 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 MORN5Q5VZ52 161 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 CYP2G1PQ6ZSU1 146 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 TMEM144Q7Z5S9 345 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 GPR141Q7Z602 305 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 NRARPQ7Z6K4 114 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 TMEM256Q8N2U0 113 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 OR1S1Q8NH92 325 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 TMEM263Q8WUH6 116 aaKnown RBP3.09□□□□□ -1.91
CTNND1-226ENST00000530720 PPP1R14BQ96C90 147 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 DIRAS2Q96HU8 199 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 VSIG2Q96IQ7 327 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 GPR82Q96P67 336 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 LINC01587Q99440 93 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 TMEM147Q9BVK8 224 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 NOP10Q9NPE3 64 aaKnown RBP3.09□□□□□ -1.91
CTNND1-226ENST00000530720 CCDC59Q9P031 241 aaKnown RBP3.09□□□□□ -1.91
CTNND1-226ENST00000530720 KCNIP3Q9Y2W7 256 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 MRPS16Q9Y3D3 137 aaKnown RBP3.09□□□□□ -1.91
CTNND1-226ENST00000530720 V9GYH0 126 aa3.09□□□□□ -1.91
CTNND1-226ENST00000530720 A0A096LPF7 62 aa3.08□□□□□ -1.92
CTNND1-226ENST00000530720 A0A0J9YY99 117 aa3.08□□□□□ -1.92
CTNND1-226ENST00000530720 A0A1W2PPQ1 181 aa3.08□□□□□ -1.92
CTNND1-226ENST00000530720 XKRY2A2RUG3 117 aa3.08□□□□□ -1.92
CTNND1-226ENST00000530720 C5orf51A6NDU8 294 aa3.08□□□□□ -1.92
CTNND1-226ENST00000530720 H3BNG1 76 aa3.08□□□□□ -1.92
CTNND1-226ENST00000530720 H3BQ15 152 aa3.08□□□□□ -1.92
CTNND1-226ENST00000530720 H7BYZ3 331 aa3.08□□□□□ -1.92
CTNND1-226ENST00000530720 WRBO00258 174 aa3.08□□□□□ -1.92
CTNND1-226ENST00000530720 ADAP1O75689 374 aa3.08□□□□□ -1.92
CTNND1-226ENST00000530720 SFT2D2O95562 160 aa3.08□□□□□ -1.92
CTNND1-226ENST00000530720 SNRPCP09234 159 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms