RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 NKX6-2Q9C056 277 aaPredicted RBP18.46■□□□□ 0.54
LDLRAD3-203ENST00000528989 PSG3Q16557 428 aa18.45■□□□□ 0.54
LDLRAD3-203ENST00000528989 PSMG4Q5JS54 123 aa18.45■□□□□ 0.54
LDLRAD3-203ENST00000528989 LINC00479Q96M42 142 aa18.45■□□□□ 0.54
LDLRAD3-203ENST00000528989 EPDR1Q9UM22 224 aa18.45■□□□□ 0.54
LDLRAD3-203ENST00000528989 OR2K2Q8NGT1 345 aa18.44■□□□□ 0.54
LDLRAD3-203ENST00000528989 CMTM2Q8TAZ6 248 aa18.44■□□□□ 0.54
LDLRAD3-203ENST00000528989 ZNF705DP0CH99 300 aaPredicted RBP18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 ZNF705BP0CI00 300 aaPredicted RBP18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 ID1P41134 155 aa18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 C5orf17Q8NAS9 161 aa18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 TREM1Q9NP99 234 aa18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 OR4C46A6NHA9 309 aa18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 F6UB75 175 aa18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 TAGLN2P37802 199 aaKnown RBP18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 CEBPGP53567 150 aa18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 SNRPD3P62318 126 aaKnown RBP18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 PEA15Q15121 130 aa18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 ZNF124Q15973 351 aa18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 ZNF738Q8NE65 137 aa18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 SGK494Q96LW2 274 aa18.43■□□□□ 0.54
LDLRAD3-203ENST00000528989 RPUSD4Q96CM3 377 aaKnown RBP18.42■□□□□ 0.54
LDLRAD3-203ENST00000528989 CITED4Q96RK1 184 aa18.42■□□□□ 0.54
LDLRAD3-203ENST00000528989 TRAV2A0A0B4J234 112 aa18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 DIRC3C9JPN6 131 aa18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 TCRAP04437 139 aa18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 SRP19P09132 144 aaKnown RBP18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 CD7P09564 240 aa18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 DEFB131AP59861 70 aa18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 DERL1Q9BUN8 251 aa18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 IGKV2-40A0A087WW87 121 aaPredicted RBP18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 WIPF1O43516 503 aa18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 IGKV2D-40P01614 121 aaPredicted RBP18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 BEAN1Q3B7T3 259 aa18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 GOLT1AQ6ZVE7 132 aa18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 CYB561D1Q8N8Q1 229 aa18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 TXNDC17Q9BRA2 123 aa18.41■□□□□ 0.54
LDLRAD3-203ENST00000528989 ODF3L2Q3SX64 289 aa18.4■□□□□ 0.54
LDLRAD3-203ENST00000528989 GDF5OSQ5U4N7 250 aa18.4■□□□□ 0.54
LDLRAD3-203ENST00000528989 SAMD13Q5VXD3 122 aa18.4■□□□□ 0.54
LDLRAD3-203ENST00000528989 APRG1Q8IVJ8 170 aa18.4■□□□□ 0.54
LDLRAD3-203ENST00000528989 TRAV8-1A0A0A6YYK1 113 aa18.39■□□□□ 0.54
LDLRAD3-203ENST00000528989 TRAV34A0A0B4J273 112 aa18.39■□□□□ 0.54
LDLRAD3-203ENST00000528989 PEX7O00628 323 aa18.39■□□□□ 0.54
LDLRAD3-203ENST00000528989 PDE6DO43924 150 aa18.39■□□□□ 0.54
LDLRAD3-203ENST00000528989 CSN1S1P47710 185 aa18.39■□□□□ 0.54
LDLRAD3-203ENST00000528989 EIF4E3Q8N5X7 224 aaKnown RBP18.39■□□□□ 0.54
LDLRAD3-203ENST00000528989 MAP6D1Q9H9H5 199 aa18.39■□□□□ 0.54
LDLRAD3-203ENST00000528989 ASCL2Q99929 193 aa18.39■□□□□ 0.53
LDLRAD3-203ENST00000528989 PRELID1Q9Y255 219 aa18.39■□□□□ 0.53
LDLRAD3-203ENST00000528989 G3V4G9 280 aa18.38■□□□□ 0.53
LDLRAD3-203ENST00000528989 ERCC8Q13216 396 aa18.38■□□□□ 0.53
LDLRAD3-203ENST00000528989 VGLL1Q99990 258 aa18.38■□□□□ 0.53
LDLRAD3-203ENST00000528989 ATG101Q9BSB4 218 aa18.38■□□□□ 0.53
LDLRAD3-203ENST00000528989 CLEC5AQ9NY25 188 aa18.38■□□□□ 0.53
LDLRAD3-203ENST00000528989 C2CD4CQ8TF44 421 aa18.37■□□□□ 0.53
LDLRAD3-203ENST00000528989 HIST1H2BAQ96A08 127 aa18.37■□□□□ 0.53
LDLRAD3-203ENST00000528989 WFDC10AQ9H1F0 79 aa18.37■□□□□ 0.53
LDLRAD3-203ENST00000528989 MRPL53Q96EL3 112 aaKnown RBP18.37■□□□□ 0.53
LDLRAD3-203ENST00000528989 SLC35B3Q9H1N7 401 aa18.37■□□□□ 0.53
LDLRAD3-203ENST00000528989 F6UZH7 168 aa18.36■□□□□ 0.53
LDLRAD3-203ENST00000528989 UQCC3Q6UW78 93 aa18.36■□□□□ 0.53
LDLRAD3-203ENST00000528989 C11orf52Q96A22 123 aa18.36■□□□□ 0.53
LDLRAD3-203ENST00000528989 SMDT1Q9H4I9 107 aa18.36■□□□□ 0.53
LDLRAD3-203ENST00000528989 TMEM250H0YL14 139 aa18.35■□□□□ 0.53
LDLRAD3-203ENST00000528989 KRTAP10-11P60412 298 aa18.35■□□□□ 0.53
LDLRAD3-203ENST00000528989 NDUFA5Q16718 116 aa18.35■□□□□ 0.53
LDLRAD3-203ENST00000528989 C19orf73Q9NVV2 129 aa18.35■□□□□ 0.53
LDLRAD3-203ENST00000528989 KNCNA6PVL3 124 aa18.35■□□□□ 0.53
LDLRAD3-203ENST00000528989 IGLV2-11P01706 119 aa18.35■□□□□ 0.53
LDLRAD3-203ENST00000528989 SFTA3P0C7M3 94 aa18.35■□□□□ 0.53
LDLRAD3-203ENST00000528989 ZNF674Q2M3X9 581 aa18.35■□□□□ 0.53
LDLRAD3-203ENST00000528989 RPL35P42766 123 aaKnown RBP18.34■□□□□ 0.53
LDLRAD3-203ENST00000528989 OR8A1Q8NGG7 326 aa18.34■□□□□ 0.53
LDLRAD3-203ENST00000528989 TCEAL7Q9BRU2 100 aa18.34■□□□□ 0.53
LDLRAD3-203ENST00000528989 MGAM2Q2M2H8 2515 aa18.34■□□□□ 0.53
LDLRAD3-203ENST00000528989 AGRNO00468 2067 aa18.33■□□□□ 0.53
LDLRAD3-203ENST00000528989 OR11H12B2RN74 326 aa18.33■□□□□ 0.53
LDLRAD3-203ENST00000528989 AGPAT4-IT1Q9H0P7 198 aa18.33■□□□□ 0.53
LDLRAD3-203ENST00000528989 PARLQ9H300 379 aa18.33■□□□□ 0.53
LDLRAD3-203ENST00000528989 AKR1C3P42330 323 aa18.33■□□□□ 0.52
LDLRAD3-203ENST00000528989 HIST1H1AQ02539 215 aaPredicted RBP18.33■□□□□ 0.52
LDLRAD3-203ENST00000528989 ACTL10Q5JWF8 245 aa18.33■□□□□ 0.52
LDLRAD3-203ENST00000528989 Q8TAT8 98 aa18.33■□□□□ 0.52
LDLRAD3-203ENST00000528989 ARL6IP6Q8N6S5 226 aa18.32■□□□□ 0.52
LDLRAD3-203ENST00000528989 TRBV20OR9-2A0A075B6H5 130 aa18.31■□□□□ 0.52
LDLRAD3-203ENST00000528989 A0A0J9YX75 114 aa18.31■□□□□ 0.52
LDLRAD3-203ENST00000528989 TMEM218A2RU14 115 aa18.31■□□□□ 0.52
LDLRAD3-203ENST00000528989 IGKV3-20P01619 116 aa18.31■□□□□ 0.52
LDLRAD3-203ENST00000528989 PRR25Q96S07 402 aa18.31■□□□□ 0.52
LDLRAD3-203ENST00000528989 GPR61Q9BZJ8 451 aa18.31■□□□□ 0.52
LDLRAD3-203ENST00000528989 SAV1Q9H4B6 383 aaPredicted RBP18.31■□□□□ 0.52
LDLRAD3-203ENST00000528989 KLF12Q9Y4X4 402 aa18.31■□□□□ 0.52
LDLRAD3-203ENST00000528989 ADCYAP1P18509 176 aa18.31■□□□□ 0.52
LDLRAD3-203ENST00000528989 CNN1P51911 297 aaKnown RBP18.31■□□□□ 0.52
LDLRAD3-203ENST00000528989 SAMD5Q5TGI4 173 aa18.31■□□□□ 0.52
LDLRAD3-203ENST00000528989 OR10J6PQ8NGY7 276 aa18.31■□□□□ 0.52
LDLRAD3-203ENST00000528989 EGFEM1PQ0D2K5 195 aa18.3■□□□□ 0.52
LDLRAD3-203ENST00000528989 SOHLH1Q5JUK2 328 aa18.3■□□□□ 0.52
LDLRAD3-203ENST00000528989 PRNTQ86SH4 94 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms