RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 G3V318 75 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 CCL25O15444 150 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 NUDT3O95989 172 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 CT45A10P0DMU9 189 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 C21orf62-AS1Q17RA5 79 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 LY6G5BQ8NDX9 201 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 AAMDCQ9H7C9 122 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 IGLV11-55A0A075B6I3 123 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 TMEM189A5PLL7 270 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 PRAC2D3DTV9 90 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 K7EQM0 130 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 CT83Q5H943 113 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 Q6ZQT7 251 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 FA2HQ7L5A8 372 aa5.82□□□□□ -1.48
C11orf54-207ENST00000528288 NEU4Q8WWR8 484 aaPredicted RBP5.82□□□□□ -1.48
C11orf54-207ENST00000528288 WI2-2373I1.2A0A1W2PRP0 233 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 EGR2P11161 476 aaPredicted RBP5.81□□□□□ -1.48
C11orf54-207ENST00000528288 PTTG1IPP53801 180 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 RIGQ13278 110 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 LY6DQ14210 128 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 NDFIP1Q9BT67 221 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 MAP1LC3CQ9BXW4 147 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 GFRA4Q9GZZ7 299 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 SMAD5-AS1Q9Y6J3 95 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 J3KRW8 73 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 SPRY2O43597 315 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 OR5AL1P0C617 328 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 FOSL1P15407 271 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 HOXB4P17483 251 aaPredicted RBP5.81□□□□□ -1.48
C11orf54-207ENST00000528288 CEACAM3P40198 252 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 TWIST1Q15672 202 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 OR11H6Q8NGC7 330 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 SMIM12Q96EX1 92 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 UBTD1Q9HAC8 227 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 AP5S1Q9NUS5 200 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 ORM1P02763 201 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 CTSGP08311 255 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 PRTN3P24158 256 aa5.81□□□□□ -1.48
C11orf54-207ENST00000528288 CHCHD1Q96BP2 118 aaKnown RBP5.81□□□□□ -1.48
C11orf54-207ENST00000528288 CSN1S1P47710 185 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 TMEM219Q86XT9 240 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 CSMD2Q7Z408 3487 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 CRYBG3Q68DQ2 2970 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 IGHV7-81A0A0B4J1V7 117 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 NDUFA3O95167 84 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 CLEC3BP05452 202 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 GATA1P15976 413 aaPredicted RBP5.8□□□□□ -1.48
C11orf54-207ENST00000528288 EVI2AP22794 236 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 CLEC19AQ6UXS0 136 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 ZNF562Q6V9R5 426 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 NPBQ8NG41 125 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 C18orf15Q96N68 181 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 C20orf202A1L168 122 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 ODF3BA8MYP8 253 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 HSBP1L1C9JCN9 74 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 C15orf32Q32M92 178 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 PRELID3AQ96N28 172 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 TMEM191AQ9H0A3 160 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 SIGLEC8Q9NYZ4 499 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 SOX21Q9Y651 276 aaPredicted RBP5.8□□□□□ -1.48
C11orf54-207ENST00000528288 CELSR2Q9HCU4 2923 aa5.8□□□□□ -1.48
C11orf54-207ENST00000528288 UQCRFS1P47985 274 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 C16orf54Q6UWD8 224 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 NAA38Q9BRA0 125 aaKnown RBP5.79□□□□□ -1.48
C11orf54-207ENST00000528288 MSRB2Q9Y3D2 182 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 MRPS16Q9Y3D3 137 aaKnown RBP5.79□□□□□ -1.48
C11orf54-207ENST00000528288 CSPG4Q6UVK1 2322 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 IGHG4P01861 327 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 DEFB1P60022 68 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 VAMP3Q15836 100 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 MRPL51Q4U2R6 128 aaKnown RBP5.79□□□□□ -1.48
C11orf54-207ENST00000528288 SLC25A34Q6PIV7 304 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 PRR25Q96S07 402 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 RNF5Q99942 180 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 A0A096LNJ9 63 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 ATP6V0E1O15342 81 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 NPYP01303 97 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 RHOGP84095 191 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 FAM162BQ5T6X4 162 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 ZNF747Q9BV97 191 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 RNF24Q9Y225 148 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 UTP20O75691 2785 aaKnown RBP5.79□□□□□ -1.48
C11orf54-207ENST00000528288 GAGE1Q13065 139 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 PRSS57Q6UWY2 283 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 MRPL52Q86TS9 123 aaKnown RBP5.79□□□□□ -1.48
C11orf54-207ENST00000528288 RABAC1Q9UI14 185 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 COX11Q9Y6N1 276 aa5.79□□□□□ -1.48
C11orf54-207ENST00000528288 ITPR1Q14643 2758 aa5.78□□□□□ -1.48
C11orf54-207ENST00000528288 CKS2P33552 79 aa5.78□□□□□ -1.48
C11orf54-207ENST00000528288 PAX2Q02962 417 aa5.78□□□□□ -1.48
C11orf54-207ENST00000528288 ANKRD39Q53RE8 183 aa5.78□□□□□ -1.48
C11orf54-207ENST00000528288 C11orf71Q6IPW1 123 aa5.78□□□□□ -1.48
C11orf54-207ENST00000528288 IL17RELQ6ZVW7 336 aa5.78□□□□□ -1.48
C11orf54-207ENST00000528288 Q8N9W7 124 aa5.78□□□□□ -1.48
C11orf54-207ENST00000528288 HSPB8Q9UJY1 196 aa5.78□□□□□ -1.48
C11orf54-207ENST00000528288 IGKV3-7A0A075B6H7 116 aa5.78□□□□□ -1.48
C11orf54-207ENST00000528288 FAM231BA6NCW3 169 aa5.78□□□□□ -1.48
C11orf54-207ENST00000528288 SAA4P35542 130 aa5.78□□□□□ -1.48
C11orf54-207ENST00000528288 CACNG7P62955 275 aa5.78□□□□□ -1.48
C11orf54-207ENST00000528288 NHLH1Q02575 133 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms