RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 IGHV4-39P01824 125 aa13.64□□□□□ -0.23
USH1C-205ENST00000527020 BTF3P20290 206 aaKnown RBP13.64□□□□□ -0.23
USH1C-205ENST00000527020 MAJINQ3KP22 176 aa13.64□□□□□ -0.23
USH1C-205ENST00000527020 FAM162BQ5T6X4 162 aa13.64□□□□□ -0.23
USH1C-205ENST00000527020 ARL6IP6Q8N6S5 226 aa13.64□□□□□ -0.23
USH1C-205ENST00000527020 SCGB2A1O75556 95 aa13.63□□□□□ -0.23
USH1C-205ENST00000527020 RIGQ13278 110 aa13.63□□□□□ -0.23
USH1C-205ENST00000527020 CCDC140Q96MF4 163 aa13.63□□□□□ -0.23
USH1C-205ENST00000527020 SH2D1AO60880 128 aa13.62□□□□□ -0.23
USH1C-205ENST00000527020 CLEC3BP05452 202 aa13.62□□□□□ -0.23
USH1C-205ENST00000527020 CT45A10P0DMU9 189 aa13.62□□□□□ -0.23
USH1C-205ENST00000527020 IGLC3P0DOY3 106 aa13.62□□□□□ -0.23
USH1C-205ENST00000527020 LINC00173Q6ZV60 143 aa13.62□□□□□ -0.23
USH1C-205ENST00000527020 PRR25Q96S07 402 aa13.62□□□□□ -0.23
USH1C-205ENST00000527020 VGLL1Q99990 258 aa13.62□□□□□ -0.23
USH1C-205ENST00000527020 LINC00614P0C842 121 aa13.62□□□□□ -0.23
USH1C-205ENST00000527020 ZNF138P52744 262 aa13.62□□□□□ -0.23
USH1C-205ENST00000527020 SSTP61278 116 aa13.62□□□□□ -0.23
USH1C-205ENST00000527020 Q6AWC8 147 aa13.61□□□□□ -0.23
USH1C-205ENST00000527020 C5orf56Q8N8D9 126 aa13.61□□□□□ -0.23
USH1C-205ENST00000527020 Q8TAT8 98 aa13.61□□□□□ -0.23
USH1C-205ENST00000527020 CLPSL1A2RUU4 121 aa13.61□□□□□ -0.23
USH1C-205ENST00000527020 RELQ04864 619 aaPredicted RBP13.61□□□□□ -0.23
USH1C-205ENST00000527020 TMSB15BA0A087X1C1 80 aa13.6□□□□□ -0.23
USH1C-205ENST00000527020 A0A1B0GW15 77 aa13.6□□□□□ -0.23
USH1C-205ENST00000527020 M0QZK8 103 aa13.6□□□□□ -0.23
USH1C-205ENST00000527020 BUB3O43684 328 aa13.6□□□□□ -0.23
USH1C-205ENST00000527020 ZNF80P51504 273 aaPredicted RBP13.6□□□□□ -0.23
USH1C-205ENST00000527020 TPPP3Q9BW30 176 aa13.6□□□□□ -0.23
USH1C-205ENST00000527020 PKD1L2Q7Z442 2459 aa13.6□□□□□ -0.23
USH1C-205ENST00000527020 TMEM189A5PLL7 270 aa13.59□□□□□ -0.23
USH1C-205ENST00000527020 CRXO43186 299 aaPredicted RBP13.59□□□□□ -0.23
USH1C-205ENST00000527020 PAX8Q06710 450 aa13.59□□□□□ -0.23
USH1C-205ENST00000527020 SAPCD1Q5SSQ6 148 aa13.59□□□□□ -0.23
USH1C-205ENST00000527020 LYZL1Q6UWQ5 148 aa13.59□□□□□ -0.23
USH1C-205ENST00000527020 ZNF575Q86XF7 245 aa13.59□□□□□ -0.23
USH1C-205ENST00000527020 TMEM70Q9BUB7 260 aa13.59□□□□□ -0.23
USH1C-205ENST00000527020 CLEC19AQ6UXS0 136 aa13.59□□□□□ -0.23
USH1C-205ENST00000527020 ZNF493Q6ZR52 646 aa13.59□□□□□ -0.23
USH1C-205ENST00000527020 UQCR10Q9UDW1 63 aa13.59□□□□□ -0.23
USH1C-205ENST00000527020 CFAP46Q8IYW2 2715 aa13.59□□□□□ -0.23
USH1C-205ENST00000527020 A0A087X0K7 114 aa13.58□□□□□ -0.24
USH1C-205ENST00000527020 TMEM219Q86XT9 240 aa13.58□□□□□ -0.24
USH1C-205ENST00000527020 PSMG3-AS1Q96PY0 264 aa13.58□□□□□ -0.24
USH1C-205ENST00000527020 IGHV3OR16-10A0A075B7F0 116 aa13.58□□□□□ -0.24
USH1C-205ENST00000527020 TRAV9-2A0A087WT02 112 aa13.58□□□□□ -0.24
USH1C-205ENST00000527020 TMEM213A2RRL7 107 aa13.58□□□□□ -0.24
USH1C-205ENST00000527020 TCAPO15273 167 aa13.58□□□□□ -0.24
USH1C-205ENST00000527020 PIFOQ8TCI5 191 aa13.58□□□□□ -0.24
USH1C-205ENST00000527020 FBLL1A6NHQ2 334 aaKnown RBP13.57□□□□□ -0.24
USH1C-205ENST00000527020 PRAC2D3DTV9 90 aa13.57□□□□□ -0.24
USH1C-205ENST00000527020 DMRTA1Q5VZB9 504 aa13.57□□□□□ -0.24
USH1C-205ENST00000527020 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.57□□□□□ -0.24
USH1C-205ENST00000527020 COL12A1Q99715 3063 aa13.57□□□□□ -0.24
USH1C-205ENST00000527020 LEPROTL1O95214 131 aa13.56□□□□□ -0.24
USH1C-205ENST00000527020 CSN3P07498 182 aa13.56□□□□□ -0.24
USH1C-205ENST00000527020 S100A7P31151 101 aa13.56□□□□□ -0.24
USH1C-205ENST00000527020 C19orf54Q5BKX5 351 aa13.56□□□□□ -0.24
USH1C-205ENST00000527020 IGHV4-61A0A0C4DH41 118 aa13.56□□□□□ -0.24
USH1C-205ENST00000527020 IGHV3-66A0A0C4DH42 116 aa13.56□□□□□ -0.24
USH1C-205ENST00000527020 SYS1-DBNDD2H3BUS1 97 aa13.56□□□□□ -0.24
USH1C-205ENST00000527020 GOSR1O95249 250 aa13.56□□□□□ -0.24
USH1C-205ENST00000527020 IGLL1P15814 213 aa13.56□□□□□ -0.24
USH1C-205ENST00000527020 RNF182Q8N6D2 247 aa13.55□□□□□ -0.24
USH1C-205ENST00000527020 KLHDC1Q8N7A1 406 aa13.55□□□□□ -0.24
USH1C-205ENST00000527020 EEF1AKMT3Q96AZ1 226 aa13.55□□□□□ -0.24
USH1C-205ENST00000527020 RAB9AP51151 201 aa13.55□□□□□ -0.24
USH1C-205ENST00000527020 ERCC8Q13216 396 aa13.55□□□□□ -0.24
USH1C-205ENST00000527020 Q6ZN92 141 aa13.55□□□□□ -0.24
USH1C-205ENST00000527020 MOB4Q9Y3A3 225 aa13.55□□□□□ -0.24
USH1C-205ENST00000527020 U3KQK5 164 aa13.55□□□□□ -0.24
USH1C-205ENST00000527020 SPTAN1Q13813 2472 aaKnown RBP13.55□□□□□ -0.24
USH1C-205ENST00000527020 TRBV7-1A0A0A6YYK4 115 aa13.54□□□□□ -0.24
USH1C-205ENST00000527020 IGHV1-69DA0A0B4J2H0 117 aa13.54□□□□□ -0.24
USH1C-205ENST00000527020 MUC21A0A0G2JKD1 596 aa13.54□□□□□ -0.24
USH1C-205ENST00000527020 MUC21A0A140T8X8 626 aa13.54□□□□□ -0.24
USH1C-205ENST00000527020 IGHV1-69P01742 117 aa13.54□□□□□ -0.24
USH1C-205ENST00000527020 RPLP1P05386 114 aaKnown RBP13.54□□□□□ -0.24
USH1C-205ENST00000527020 OR5AL1P0C617 328 aa13.54□□□□□ -0.24
USH1C-205ENST00000527020 MUC21Q5SSG8 566 aa13.54□□□□□ -0.24
USH1C-205ENST00000527020 BRD3OSQ6XYD6 125 aa13.54□□□□□ -0.24
USH1C-205ENST00000527020 IGHV3OR16-13A0A075B7E8 117 aa13.54□□□□□ -0.24
USH1C-205ENST00000527020 IGHV3-74A0A0B4J1X5 117 aa13.54□□□□□ -0.24
USH1C-205ENST00000527020 OR4C46A6NHA9 309 aa13.54□□□□□ -0.24
USH1C-205ENST00000527020 IGLC6P0CF74 106 aa13.54□□□□□ -0.24
USH1C-205ENST00000527020 FAM104BQ5XKR9 115 aa13.54□□□□□ -0.24
USH1C-205ENST00000527020 C20orf202A1L168 122 aa13.53□□□□□ -0.24
USH1C-205ENST00000527020 BATFQ16520 125 aa13.53□□□□□ -0.24
USH1C-205ENST00000527020 AMN1Q8IY45 258 aa13.53□□□□□ -0.24
USH1C-205ENST00000527020 CELSR2Q9HCU4 2923 aa13.53□□□□□ -0.24
USH1C-205ENST00000527020 IGHV3-49A0A0A0MS15 119 aa13.52□□□□□ -0.24
USH1C-205ENST00000527020 TRAV8-2A0A0B4J237 113 aa13.52□□□□□ -0.24
USH1C-205ENST00000527020 TRAV40A0A0B4J280 105 aa13.52□□□□□ -0.24
USH1C-205ENST00000527020 D6R8Y8 96 aa13.52□□□□□ -0.24
USH1C-205ENST00000527020 ZNF207O43670 478 aaKnown RBP13.52□□□□□ -0.24
USH1C-205ENST00000527020 BMI1P35226 326 aa13.52□□□□□ -0.24
USH1C-205ENST00000527020 CRIP2P52943 208 aaPredicted RBP13.52□□□□□ -0.24
USH1C-205ENST00000527020 CYB5R2Q6BCY4 276 aa13.52□□□□□ -0.24
USH1C-205ENST00000527020 LINC00527Q9UJ94 153 aa13.52□□□□□ -0.24
USH1C-205ENST00000527020 U3KQE9 123 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms