RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 NOTCH3Q9UM47 2321 aa6.49□□□□□ -1.37
VAPB-206ENST00000520497 A0A087X0K7 114 aa6.49□□□□□ -1.37
VAPB-206ENST00000520497 ZNF320A2RRD8 509 aa6.49□□□□□ -1.37
VAPB-206ENST00000520497 TMEM213A2RRL7 107 aa6.49□□□□□ -1.37
VAPB-206ENST00000520497 M0QZ24 198 aa6.49□□□□□ -1.37
VAPB-206ENST00000520497 DNASE2O00115 360 aaPredicted RBP6.49□□□□□ -1.37
VAPB-206ENST00000520497 APOHP02749 345 aaPredicted RBP6.49□□□□□ -1.37
VAPB-206ENST00000520497 IGLC2P0DOY2 106 aa6.49□□□□□ -1.37
VAPB-206ENST00000520497 KLF5Q13887 457 aaPredicted RBP6.49□□□□□ -1.37
VAPB-206ENST00000520497 CENPWQ5EE01 88 aa6.49□□□□□ -1.37
VAPB-206ENST00000520497 TMEM88Q6PEY1 159 aa6.49□□□□□ -1.37
VAPB-206ENST00000520497 C1QL4Q86Z23 238 aa6.49□□□□□ -1.37
VAPB-206ENST00000520497 CBLN2Q8IUK8 224 aa6.49□□□□□ -1.37
VAPB-206ENST00000520497 C2CD4CQ8TF44 421 aa6.49□□□□□ -1.37
VAPB-206ENST00000520497 ZNF586Q9NXT0 402 aa6.49□□□□□ -1.37
VAPB-206ENST00000520497 RPH3ALQ9UNE2 315 aa6.49□□□□□ -1.37
VAPB-206ENST00000520497 AGRNO00468 2067 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 IGHV7-4-1A0A0J9YVY3 117 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 ZNF207O43670 478 aaKnown RBP6.48□□□□□ -1.37
VAPB-206ENST00000520497 TCRAP04437 139 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 MYCNOSP40205 109 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 SLURP1P55000 103 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 SYNJ2BPP57105 145 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 TMEM183BQ1AE95 376 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 RNF212Q495C1 297 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 TM4SF20Q53R12 229 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 C4orf48Q5BLP8 95 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 C16orf54Q6UWD8 224 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 SIGLEC15Q6ZMC9 328 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 LINC01551Q86U37 167 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 NDUFA11Q86Y39 141 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 OR1N2Q8NGR9 330 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 GLMPQ8WWB7 406 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 DPF1Q92782 380 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 ISOC2Q96AB3 205 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 C17orf77Q96MU5 243 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 CITED1Q99966 193 aa6.48□□□□□ -1.37
VAPB-206ENST00000520497 VWFP04275 2813 aa6.47□□□□□ -1.37
VAPB-206ENST00000520497 A0A1W2PRX2 142 aa6.47□□□□□ -1.37
VAPB-206ENST00000520497 CCL24O00175 119 aa6.47□□□□□ -1.37
VAPB-206ENST00000520497 MGST1P10620 155 aaKnown RBP6.47□□□□□ -1.37
VAPB-206ENST00000520497 BAGE2Q86Y30 109 aa6.47□□□□□ -1.37
VAPB-206ENST00000520497 TMEM75Q8N9X5 138 aa6.47□□□□□ -1.37
VAPB-206ENST00000520497 OR10G8Q8NGN5 311 aa6.47□□□□□ -1.37
VAPB-206ENST00000520497 SFRP2Q96HF1 295 aa6.47□□□□□ -1.37
VAPB-206ENST00000520497 DUX3Q96PT4 197 aa6.47□□□□□ -1.37
VAPB-206ENST00000520497 IMMP2LQ96T52 175 aa6.47□□□□□ -1.37
VAPB-206ENST00000520497 NDFIP1Q9BT67 221 aa6.47□□□□□ -1.37
VAPB-206ENST00000520497 DERL1Q9BUN8 251 aa6.47□□□□□ -1.37
VAPB-206ENST00000520497 SMPXQ9UHP9 88 aa6.47□□□□□ -1.37
VAPB-206ENST00000520497 SMAD5-AS1Q9Y6J3 95 aa6.47□□□□□ -1.37
VAPB-206ENST00000520497 IGHV3OR16-13A0A075B7E8 117 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 IGHV3-49A0A0A0MS15 119 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 IGHV3-74A0A0B4J1X5 117 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 IGHV3-66A0A0C4DH42 116 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 TRBV6-1A0A0K0K1D8 114 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 C2orf70A6NJV1 201 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 H3BTX0 84 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 CHEK1O14757 476 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 EDN2P20800 178 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 ERVFC1-1P60608 527 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 GNG5P63218 68 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 ADAMTSL5Q6ZMM2 481 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 GOLT1AQ6ZVE7 132 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 OR9G4Q8NGQ1 327 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 OCC1Q8TAD7 63 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 DLX4Q92988 240 aaPredicted RBP6.46□□□□□ -1.38
VAPB-206ENST00000520497 MRPL53Q96EL3 112 aaKnown RBP6.46□□□□□ -1.38
VAPB-206ENST00000520497 RHPN1-AS1Q9BWJ2 59 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 PEMTQ9UBM1 199 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 ZFP30Q9Y2G7 519 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 KLF12Q9Y4X4 402 aa6.46□□□□□ -1.38
VAPB-206ENST00000520497 TRAV9-1A0A075B6T8 112 aa6.45□□□□□ -1.38
VAPB-206ENST00000520497 SLC17A3O00476 420 aa6.45□□□□□ -1.38
VAPB-206ENST00000520497 GCGP01275 180 aa6.45□□□□□ -1.38
VAPB-206ENST00000520497 SNRPCP09234 159 aaKnown RBP6.45□□□□□ -1.38
VAPB-206ENST00000520497 CT45A10P0DMU9 189 aa6.45□□□□□ -1.38
VAPB-206ENST00000520497 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
VAPB-206ENST00000520497 ID1P41134 155 aa6.45□□□□□ -1.38
VAPB-206ENST00000520497 RPL11P62913 178 aaKnown RBP6.45□□□□□ -1.38
VAPB-206ENST00000520497 FLI1Q01543 452 aaPredicted RBP6.45□□□□□ -1.38
VAPB-206ENST00000520497 NSUN5P1Q3KNT7 163 aa6.45□□□□□ -1.38
VAPB-206ENST00000520497 SAPCD1Q5SSQ6 148 aa6.45□□□□□ -1.38
VAPB-206ENST00000520497 Q86TA4 180 aa6.45□□□□□ -1.38
VAPB-206ENST00000520497 EXOC3-AS1Q8N2X6 119 aa6.45□□□□□ -1.38
VAPB-206ENST00000520497 DAZAP1Q96EP5 407 aaKnown RBP6.45□□□□□ -1.38
VAPB-206ENST00000520497 C16orf92Q96LL3 132 aa6.45□□□□□ -1.38
VAPB-206ENST00000520497 IGF2BP2-AS1Q96M15 143 aa6.45□□□□□ -1.38
VAPB-206ENST00000520497 ZNF331Q9NQX6 463 aaPredicted RBP6.45□□□□□ -1.38
VAPB-206ENST00000520497 OSTCQ9NRP0 149 aa6.45□□□□□ -1.38
VAPB-206ENST00000520497 TMA7Q9Y2S6 64 aaKnown RBP6.45□□□□□ -1.38
VAPB-206ENST00000520497 TRRAPQ9Y4A5 3859 aa6.45□□□□□ -1.38
VAPB-206ENST00000520497 NBEAL1Q6ZS30 2694 aa6.44□□□□□ -1.38
VAPB-206ENST00000520497 TRBV20OR9-2A0A075B6H5 130 aa6.44□□□□□ -1.38
VAPB-206ENST00000520497 RBAKDNA6NC62 111 aa6.44□□□□□ -1.38
VAPB-206ENST00000520497 C1orf196B1AJZ1 125 aa6.44□□□□□ -1.38
VAPB-206ENST00000520497 DIRC3C9JPN6 131 aa6.44□□□□□ -1.38
VAPB-206ENST00000520497 ISLRO14498 428 aa6.44□□□□□ -1.38
VAPB-206ENST00000520497 CSN3P07498 182 aa6.44□□□□□ -1.38
VAPB-206ENST00000520497 CBLN1P23435 193 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms