RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 A0A1W2PPQ1 181 aa8.79□□□□□ -1
VEGFA-216ENST00000512683 IGSF23A1L1A6 192 aa8.79□□□□□ -1
VEGFA-216ENST00000512683 SNRPCP09234 159 aaKnown RBP8.79□□□□□ -1
VEGFA-216ENST00000512683 AZU1P20160 251 aa8.79□□□□□ -1
VEGFA-216ENST00000512683 CAMLGP49069 296 aa8.79□□□□□ -1
VEGFA-216ENST00000512683 RAB32Q13637 225 aa8.79□□□□□ -1
VEGFA-216ENST00000512683 CLINT1Q14677 625 aa8.79□□□□□ -1
VEGFA-216ENST00000512683 OPCMLQ14982 345 aa8.79□□□□□ -1
VEGFA-216ENST00000512683 NRARPQ7Z6K4 114 aa8.79□□□□□ -1
VEGFA-216ENST00000512683 BAP18Q8IXM2 172 aa8.79□□□□□ -1
VEGFA-216ENST00000512683 TMEM263Q8WUH6 116 aaKnown RBP8.79□□□□□ -1
VEGFA-216ENST00000512683 S100ZQ8WXG8 99 aa8.79□□□□□ -1
VEGFA-216ENST00000512683 Q9H8V8 135 aa8.79□□□□□ -1
VEGFA-216ENST00000512683 ZNF331Q9NQX6 463 aaPredicted RBP8.79□□□□□ -1
VEGFA-216ENST00000512683 LYRM2Q9NU23 88 aaPredicted RBP8.79□□□□□ -1
VEGFA-216ENST00000512683 LINC00588Q9Y4M8 146 aa8.79□□□□□ -1
VEGFA-216ENST00000512683 ABCA13Q86UQ4 5058 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 TRAV12-2A0A075B6T6 113 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 H3BQ15 152 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 SLC17A3O00476 420 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 COX7A2P2O60397 106 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 IGLC2P0DOY2 106 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 SULT1A1P50225 295 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 IFITM3Q01628 133 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 HIST1H1AQ02539 215 aaPredicted RBP8.78□□□□□ -1
VEGFA-216ENST00000512683 C10orf113Q5VZT2 155 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 MIC13Q5XKP0 118 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 MZT2BQ6NZ67 158 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 LCN15Q6UWW0 184 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 SSX7Q7RTT5 188 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 CCDC28AQ8IWP9 274 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 TMEM252Q8N6L7 170 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 RPUSD4Q96CM3 377 aaKnown RBP8.78□□□□□ -1
VEGFA-216ENST00000512683 SLC50A1Q9BRV3 221 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 DNAJC4Q9NNZ3 241 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 UQCC1Q9NVA1 299 aa8.78□□□□□ -1
VEGFA-216ENST00000512683 TRAV5A0A0B4J249 113 aa8.77□□□□□ -1.01
VEGFA-216ENST00000512683 H3BTX0 84 aa8.77□□□□□ -1.01
VEGFA-216ENST00000512683 UPK1BO75841 260 aa8.77□□□□□ -1.01
VEGFA-216ENST00000512683 PVALBP20472 110 aaPredicted RBP8.77□□□□□ -1.01
VEGFA-216ENST00000512683 M6PRP20645 277 aa8.77□□□□□ -1.01
VEGFA-216ENST00000512683 S100A11P31949 105 aa8.77□□□□□ -1.01
VEGFA-216ENST00000512683 S100A10P60903 97 aa8.77□□□□□ -1.01
VEGFA-216ENST00000512683 BPIFA4PQ86YQ2 179 aa8.77□□□□□ -1.01
VEGFA-216ENST00000512683 LINC00612Q8N6U2 182 aa8.77□□□□□ -1.01
VEGFA-216ENST00000512683 RNASE8Q8TDE3 154 aaKnown RBP8.77□□□□□ -1.01
VEGFA-216ENST00000512683 RXFP4Q8TDU9 374 aa8.77□□□□□ -1.01
VEGFA-216ENST00000512683 CHAC2Q8WUX2 184 aa8.77□□□□□ -1.01
VEGFA-216ENST00000512683 RNF141Q8WVD5 230 aa8.77□□□□□ -1.01
VEGFA-216ENST00000512683 SAT2Q96F10 170 aaPredicted RBP8.77□□□□□ -1.01
VEGFA-216ENST00000512683 UPK3BQ9BT76 320 aa8.77□□□□□ -1.01
VEGFA-216ENST00000512683 PRAC2D3DTV9 90 aa8.76□□□□□ -1.01
VEGFA-216ENST00000512683 RPL29P47914 159 aaKnown RBP8.76□□□□□ -1.01
VEGFA-216ENST00000512683 RAB31Q13636 194 aa8.76□□□□□ -1.01
VEGFA-216ENST00000512683 KIR3DS1Q14943 382 aa8.76□□□□□ -1.01
VEGFA-216ENST00000512683 FCN2Q15485 313 aa8.76□□□□□ -1.01
VEGFA-216ENST00000512683 Q6ZRG5 221 aa8.76□□□□□ -1.01
VEGFA-216ENST00000512683 GNPNAT1Q96EK6 184 aaPredicted RBP8.76□□□□□ -1.01
VEGFA-216ENST00000512683 KRTAP4-5Q9BYR2 181 aa8.76□□□□□ -1.01
VEGFA-216ENST00000512683 NOP10Q9NPE3 64 aaKnown RBP8.76□□□□□ -1.01
VEGFA-216ENST00000512683 LRP1BQ9NZR2 4599 aa8.75□□□□□ -1.01
VEGFA-216ENST00000512683 UBE2L5PA0A1B0GUS4 154 aa8.75□□□□□ -1.01
VEGFA-216ENST00000512683 SIX6O95475 246 aa8.75□□□□□ -1.01
VEGFA-216ENST00000512683 GUK1Q16774 197 aa8.75□□□□□ -1.01
VEGFA-216ENST00000512683 Q8N1X5 172 aa8.75□□□□□ -1.01
VEGFA-216ENST00000512683 ODF3Q96PU9 254 aa8.75□□□□□ -1.01
VEGFA-216ENST00000512683 SLC39A9Q9NUM3 307 aa8.75□□□□□ -1.01
VEGFA-216ENST00000512683 PXMP4Q9Y6I8 212 aa8.75□□□□□ -1.01
VEGFA-216ENST00000512683 HSPG2P98160 4391 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 HTN1P15515 57 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 HBG1P69891 147 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 HBG2P69892 147 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 NHLH2Q02577 135 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 BAXQ07812 192 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 DAZ2Q13117 558 aaKnown RBP8.74□□□□□ -1.01
VEGFA-216ENST00000512683 OR5I1Q13606 314 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 ATP6V1FQ16864 119 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 STX12Q86Y82 276 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 MAPKAPK5-AS1Q8N8E1 139 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 OR1L4Q8NGR5 311 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 ENKURQ8TC29 256 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 C18orf15Q96N68 181 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 PFDN5Q99471 154 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 PARD6GQ9BYG4 376 aaPredicted RBP8.74□□□□□ -1.01
VEGFA-216ENST00000512683 Q9H3A6 140 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 GPN1Q9HCN4 374 aaPredicted RBP8.74□□□□□ -1.01
VEGFA-216ENST00000512683 ZNF586Q9NXT0 402 aa8.74□□□□□ -1.01
VEGFA-216ENST00000512683 SNURFLB1AK76 121 aa8.73□□□□□ -1.01
VEGFA-216ENST00000512683 H0YIZ8 118 aa8.73□□□□□ -1.01
VEGFA-216ENST00000512683 RLN2P04090 185 aa8.73□□□□□ -1.01
VEGFA-216ENST00000512683 FGF7P21781 194 aa8.73□□□□□ -1.01
VEGFA-216ENST00000512683 PYGO2Q9BRQ0 406 aa8.73□□□□□ -1.01
VEGFA-216ENST00000512683 PTTG2Q9NZH5 202 aa8.73□□□□□ -1.01
VEGFA-216ENST00000512683 OR5AC2Q9NZP5 309 aa8.73□□□□□ -1.01
VEGFA-216ENST00000512683 DNAH5Q8TE73 4624 aa8.73□□□□□ -1.01
VEGFA-216ENST00000512683 TRAV26-1A0A087WT03 109 aa8.72□□□□□ -1.01
VEGFA-216ENST00000512683 MPDU1O75352 247 aa8.72□□□□□ -1.01
VEGFA-216ENST00000512683 CT45A10P0DMU9 189 aa8.72□□□□□ -1.01
VEGFA-216ENST00000512683 GCSAMLQ5JQS6 135 aa8.72□□□□□ -1.01
VEGFA-216ENST00000512683 SPATA12Q7Z6I5 190 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 1765.5 ms