RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 FOLR2P14207 255 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 SNRPD3P62318 126 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 RPL23P62829 140 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 ADIRFQ15847 76 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 PSG3Q16557 428 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 DEFB136Q30KP8 78 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 CENPWQ5EE01 88 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 LCN12Q6JVE5 192 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 GOLT1AQ6ZVE7 132 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 LINC01551Q86U37 167 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 BAGE2Q86Y30 109 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 DYNLRB2Q8TF09 96 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 DLX4Q92988 240 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 DERL1Q9BUN8 251 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 TUBA4BQ9H853 241 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 RPS10P5Q9NQ39 176 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 SMCO4Q9NRQ5 59 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 RPH3ALQ9UNE2 315 aa6.17□□□□□ -1.42
TOPBP1-202ENST00000503338 ZFHX3Q15911 3703 aa6.16□□□□□ -1.42
TOPBP1-202ENST00000503338 A0A1W2PRX2 142 aa6.16□□□□□ -1.42
TOPBP1-202ENST00000503338 OVOL1O14753 267 aa6.16□□□□□ -1.42
TOPBP1-202ENST00000503338 TSPAN4O14817 238 aa6.16□□□□□ -1.42
TOPBP1-202ENST00000503338 LTAP01374 205 aa6.16□□□□□ -1.42
TOPBP1-202ENST00000503338 GNG5P63218 68 aa6.16□□□□□ -1.42
TOPBP1-202ENST00000503338 FLI1Q01543 452 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-202ENST00000503338 SAPCD1Q5SSQ6 148 aa6.16□□□□□ -1.42
TOPBP1-202ENST00000503338 C15orf54Q8N8G6 183 aa6.16□□□□□ -1.42
TOPBP1-202ENST00000503338 C11orf44Q8N8P7 122 aa6.16□□□□□ -1.42
TOPBP1-202ENST00000503338 ISOC2Q96AB3 205 aa6.16□□□□□ -1.42
TOPBP1-202ENST00000503338 IGF2BP2-AS1Q96M15 143 aa6.16□□□□□ -1.42
TOPBP1-202ENST00000503338 NDFIP1Q9BT67 221 aa6.16□□□□□ -1.42
TOPBP1-202ENST00000503338 NSD1Q96L73 2696 aaPredicted RBP6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 TRBV20OR9-2A0A075B6H5 130 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 SOCS3O14543 225 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 GCGP01275 180 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 PF4P02776 101 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 CSN3P07498 182 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 RBPMS2Q6ZRY4 209 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 Q86TA4 180 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 TMEM183AQ8IXX5 376 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 ZNF738Q8NE65 137 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 OR2K2Q8NGT1 345 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 OCC1Q8TAD7 63 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 SFRP2Q96HF1 295 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 BTF3L4Q96K17 158 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 MS4A6AQ9H2W1 248 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 PPP1R14DQ9NXH3 145 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 PSG8Q9UQ74 426 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 LENEPQ9Y5L5 61 aa6.15□□□□□ -1.42
TOPBP1-202ENST00000503338 TRAV8-2A0A0B4J237 113 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 TRAV34A0A0B4J273 112 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 TRBV7-9A0A0J9YWB2 115 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 CYSRT1A8MQ03 144 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 ADARB2-AS1A8MUL3 147 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 H7BYZ3 331 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 M0R3E3 92 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 CT45A10P0DMU9 189 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 S100PP25815 95 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 CMC4P56277 68 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 NSUN5P1Q3KNT7 163 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 RNF212Q495C1 297 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 TMEM78Q5T7P6 136 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 ATRAIDQ6UW56 229 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 FAM231DQ6ZW35 169 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 COX8CQ7Z4L0 72 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 OR10G8Q8NGN5 311 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 OR10J6PQ8NGY7 276 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 DCANP1Q8TF63 244 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 LINC00477Q96M19 166 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 LINC00479Q96M42 142 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 DUX3Q96PT4 197 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 IMMP2LQ96T52 175 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 SPAG8Q99932 426 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 CITED1Q99966 193 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 MLST8Q9BVC4 326 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 OSTCQ9NRP0 149 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 C2CD3Q4AC94 2353 aa6.14□□□□□ -1.43
TOPBP1-202ENST00000503338 OR4C46A6NHA9 309 aa6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 K7EQG2 157 aa6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 IGLV2-11P01706 119 aa6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 MGST1P10620 155 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 INSL3P51460 131 aa6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 ERVFC1-1P60608 527 aa6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 RPL19P84098 196 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 BTN1A1Q13410 526 aa6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 DEFB114Q30KQ6 69 aa6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 KCNIP4Q6PIL6 250 aa6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 C9orf47Q6ZRZ4 202 aa6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 PRNTQ86SH4 94 aa6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 DAZAP1Q96EP5 407 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 ZNF492Q9P255 531 aa6.13□□□□□ -1.43
TOPBP1-202ENST00000503338 ANK3Q12955 4377 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 IGKV3-7A0A075B6H7 116 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 IGKV2-40A0A087WW87 121 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 TRAV8-1A0A0A6YYK1 113 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 ZNF705FA8MVS1 300 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 K7EN84 100 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 SCO1O75880 301 aa6.12□□□□□ -1.43
TOPBP1-202ENST00000503338 DUSP14O95147 198 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms