RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 VGLL1Q99990 258 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 A0A1B0GWJ7 208 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 IGLC2P0DOY2 106 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 IGLC3P0DOY3 106 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 GATA1P15976 413 aaPredicted RBP10.64□□□□□ -0.71
GPC1-209ENST00000495100 RHOGP84095 191 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 POU2AF1Q16633 256 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 Q86TA4 180 aa10.64□□□□□ -0.71
GPC1-209ENST00000495100 C7orf71A4D174 169 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 LINC01548A6NM66 108 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 TSPOP30536 169 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 TTTY13Q9BZ97 58 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 BPESC1Q9GZL8 116 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 THYN1Q9P016 225 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 PF4V1P10720 104 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 Q0VG73 95 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 CR1LQ2VPA4 569 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 DYNAPQ8N1N2 210 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 PRELID3AQ96N28 172 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 SOX21Q9Y651 276 aaPredicted RBP10.63□□□□□ -0.71
GPC1-209ENST00000495100 DLEU1O43261 78 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 BEND2Q8NDZ0 799 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 RABAC1Q9UI14 185 aa10.63□□□□□ -0.71
GPC1-209ENST00000495100 TRAV26-2A0A0B4J265 109 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 IGHV1-24A0A0C4DH33 117 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 A1L4Q6 167 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 MGPP08493 103 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 LOXL1Q08397 574 aaPredicted RBP10.62□□□□□ -0.71
GPC1-209ENST00000495100 OR10J3Q5JRS4 329 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 FMC1Q96HJ9 113 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 NDFIP1Q9BT67 221 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 HIST2H2BDQ6DRA6 164 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 TRGV9Q99603 122 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 VKORC1Q9BQB6 163 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 TRAV9-2A0A087WT02 112 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 SCGB2A2Q13296 93 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 C5orf64Q2M2E5 130 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 SLC25A34Q6PIV7 304 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 NRGNQ92686 78 aa10.62□□□□□ -0.71
GPC1-209ENST00000495100 SPANXN1Q5VSR9 72 aa10.61□□□□□ -0.71
GPC1-209ENST00000495100 FAM71F2Q6NXP2 309 aa10.61□□□□□ -0.71
GPC1-209ENST00000495100 TEX43Q6ZNM6 134 aa10.61□□□□□ -0.71
GPC1-209ENST00000495100 SPATA12Q7Z6I5 190 aa10.61□□□□□ -0.71
GPC1-209ENST00000495100 OTORQ9NRC9 128 aa10.61□□□□□ -0.71
GPC1-209ENST00000495100 PPP1R14DQ9NXH3 145 aa10.61□□□□□ -0.71
GPC1-209ENST00000495100 ITGB1BP1O14713 200 aa10.61□□□□□ -0.71
GPC1-209ENST00000495100 GP9P14770 177 aa10.61□□□□□ -0.71
GPC1-209ENST00000495100 ZNF491Q8N8L2 437 aa10.61□□□□□ -0.71
GPC1-209ENST00000495100 C16orf92Q96LL3 132 aa10.61□□□□□ -0.71
GPC1-209ENST00000495100 TEX22C9J3V5 150 aa10.6□□□□□ -0.71
GPC1-209ENST00000495100 F5H697 171 aa10.6□□□□□ -0.71
GPC1-209ENST00000495100 K7EIM0 57 aa10.6□□□□□ -0.71
GPC1-209ENST00000495100 M0QZK8 103 aa10.6□□□□□ -0.71
GPC1-209ENST00000495100 KIR2DL5BA0A0G2JN68 375 aa10.6□□□□□ -0.71
GPC1-209ENST00000495100 KIR2DL5BA0A0G2JPC4 375 aa10.6□□□□□ -0.71
GPC1-209ENST00000495100 SYS1-DBNDD2H3BUS1 97 aa10.6□□□□□ -0.71
GPC1-209ENST00000495100 SH2D1AO60880 128 aa10.6□□□□□ -0.71
GPC1-209ENST00000495100 ZFP36P26651 326 aaKnown RBP10.6□□□□□ -0.71
GPC1-209ENST00000495100 COX19Q49B96 90 aa10.6□□□□□ -0.71
GPC1-209ENST00000495100 KIR2DL5AQ8N109 375 aa10.6□□□□□ -0.71
GPC1-209ENST00000495100 TRAV8-6A0A0B4J262 113 aa10.59□□□□□ -0.71
GPC1-209ENST00000495100 Q6ZQT7 251 aa10.59□□□□□ -0.71
GPC1-209ENST00000495100 ZNF738Q8NE65 137 aa10.59□□□□□ -0.71
GPC1-209ENST00000495100 TRBV19A0A075B6N1 114 aa10.59□□□□□ -0.71
GPC1-209ENST00000495100 TRAV40A0A0B4J280 105 aa10.59□□□□□ -0.71
GPC1-209ENST00000495100 TOMM40O96008 361 aa10.59□□□□□ -0.71
GPC1-209ENST00000495100 SAA4P35542 130 aa10.59□□□□□ -0.71
GPC1-209ENST00000495100 TMEM160Q9NX00 188 aa10.59□□□□□ -0.71
GPC1-209ENST00000495100 HRNRQ86YZ3 2850 aaPredicted RBP10.59□□□□□ -0.71
GPC1-209ENST00000495100 PRAC2D3DTV9 90 aa10.59□□□□□ -0.71
GPC1-209ENST00000495100 GCSHP23434 173 aa10.59□□□□□ -0.71
GPC1-209ENST00000495100 ATP6V0E1O15342 81 aa10.58□□□□□ -0.72
GPC1-209ENST00000495100 IGLV1-47P01700 117 aa10.58□□□□□ -0.72
GPC1-209ENST00000495100 LBHQ53QV2 105 aaPredicted RBP10.58□□□□□ -0.72
GPC1-209ENST00000495100 K7ENP7 123 aa10.58□□□□□ -0.72
GPC1-209ENST00000495100 SCGB2A1O75556 95 aa10.58□□□□□ -0.72
GPC1-209ENST00000495100 EMP1P54849 157 aa10.58□□□□□ -0.72
GPC1-209ENST00000495100 ARL6IP6Q8N6S5 226 aa10.58□□□□□ -0.72
GPC1-209ENST00000495100 AMMECR1LQ6DCA0 310 aa10.58□□□□□ -0.72
GPC1-209ENST00000495100 FER1L6-AS1Q8NA97 138 aa10.58□□□□□ -0.72
GPC1-209ENST00000495100 OR10AG1Q8NH19 301 aa10.58□□□□□ -0.72
GPC1-209ENST00000495100 MBD6Q96DN6 1003 aa10.58□□□□□ -0.72
GPC1-209ENST00000495100 C20orf144Q9BQM9 153 aa10.58□□□□□ -0.72
GPC1-209ENST00000495100 HSPB8Q9UJY1 196 aa10.58□□□□□ -0.72
GPC1-209ENST00000495100 LY96Q9Y6Y9 160 aa10.58□□□□□ -0.72
GPC1-209ENST00000495100 RPL7P18124 248 aaKnown RBP10.57□□□□□ -0.72
GPC1-209ENST00000495100 PCP4P48539 62 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 CFAP46Q8IYW2 2715 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 TRAV9-1A0A075B6T8 112 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 F6UB75 175 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 TRGV3P03979 118 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 FAM74A4Q5TZK3 123 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 IL17RELQ6ZVW7 336 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 SMIM15Q7Z3B0 74 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 AGRNO00468 2067 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 PSMB11A5LHX3 300 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 I3L2K1 104 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 GAS8-AS1O95177 125 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 GOSR1O95249 250 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 HIST1H1AQ02539 215 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms