RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 RBAKDNA6NC62 111 aa9.06□□□□□ -0.96
RFC4-214ENST00000494047 COX7A1P24310 79 aa9.06□□□□□ -0.96
RFC4-214ENST00000494047 HIST1H1AQ02539 215 aaPredicted RBP9.06□□□□□ -0.96
RFC4-214ENST00000494047 LINC01545Q5VT33 79 aa9.06□□□□□ -0.96
RFC4-214ENST00000494047 CFHR4Q92496 578 aa9.06□□□□□ -0.96
RFC4-214ENST00000494047 ZNF414Q96IQ9 312 aa9.06□□□□□ -0.96
RFC4-214ENST00000494047 SLC50A1Q9BRV3 221 aa9.06□□□□□ -0.96
RFC4-214ENST00000494047 SSBP4Q9BWG4 385 aaPredicted RBP9.06□□□□□ -0.96
RFC4-214ENST00000494047 C21orf62Q9NYP8 219 aa9.06□□□□□ -0.96
RFC4-214ENST00000494047 TEX15Q9BXT5 2789 aa9.06□□□□□ -0.96
RFC4-214ENST00000494047 LOC105371242A0A075B767 164 aa9.05□□□□□ -0.96
RFC4-214ENST00000494047 TMEM189A5PLL7 270 aa9.05□□□□□ -0.96
RFC4-214ENST00000494047 MRPS12O15235 138 aaKnown RBP9.05□□□□□ -0.96
RFC4-214ENST00000494047 IGHV3-48P01763 117 aa9.05□□□□□ -0.96
RFC4-214ENST00000494047 IGLL1P15814 213 aa9.05□□□□□ -0.96
RFC4-214ENST00000494047 FAM120AOSQ5T036 256 aa9.05□□□□□ -0.96
RFC4-214ENST00000494047 ORMDL3Q8N138 153 aa9.05□□□□□ -0.96
RFC4-214ENST00000494047 MRPL53Q96EL3 112 aaKnown RBP9.05□□□□□ -0.96
RFC4-214ENST00000494047 RITA1Q96K30 269 aa9.05□□□□□ -0.96
RFC4-214ENST00000494047 HIF1ANQ9NWT6 349 aa9.05□□□□□ -0.96
RFC4-214ENST00000494047 RABAC1Q9UI14 185 aa9.05□□□□□ -0.96
RFC4-214ENST00000494047 RNF114Q9Y508 228 aa9.05□□□□□ -0.96
RFC4-214ENST00000494047 COX11Q9Y6N1 276 aa9.05□□□□□ -0.96
RFC4-214ENST00000494047 APCP25054 2843 aa9.05□□□□□ -0.96
RFC4-214ENST00000494047 A0A087X0K7 114 aa9.04□□□□□ -0.96
RFC4-214ENST00000494047 SIAH2O43255 324 aa9.04□□□□□ -0.96
RFC4-214ENST00000494047 CNTFRP26992 372 aa9.04□□□□□ -0.96
RFC4-214ENST00000494047 PRSS3P2Q8NHM4 247 aa9.04□□□□□ -0.96
RFC4-214ENST00000494047 ZC2HC1AQ96GY0 325 aa9.04□□□□□ -0.96
RFC4-214ENST00000494047 U3KQK5 164 aa9.04□□□□□ -0.96
RFC4-214ENST00000494047 SPG11Q96JI7 2443 aa9.04□□□□□ -0.96
RFC4-214ENST00000494047 ABCA4P78363 2273 aa9.04□□□□□ -0.96
RFC4-214ENST00000494047 VWC2LB2RUY7 222 aa9.03□□□□□ -0.96
RFC4-214ENST00000494047 FAM106CPP0CH98 169 aa9.03□□□□□ -0.96
RFC4-214ENST00000494047 SEC11AP67812 179 aa9.03□□□□□ -0.96
RFC4-214ENST00000494047 RELQ04864 619 aaPredicted RBP9.03□□□□□ -0.96
RFC4-214ENST00000494047 LGALS9BQ3B8N2 356 aa9.03□□□□□ -0.96
RFC4-214ENST00000494047 LGALS9CQ6DKI2 356 aa9.03□□□□□ -0.96
RFC4-214ENST00000494047 LINC00322Q6ZN03 302 aaPredicted RBP9.03□□□□□ -0.96
RFC4-214ENST00000494047 CNFNQ9BYD5 112 aa9.03□□□□□ -0.96
RFC4-214ENST00000494047 MYO9AB2RTY4 2548 aa9.03□□□□□ -0.96
RFC4-214ENST00000494047 SIVA1O15304 175 aa9.02□□□□□ -0.97
RFC4-214ENST00000494047 COL8A2P25067 703 aa9.02□□□□□ -0.97
RFC4-214ENST00000494047 UBE2V1Q13404 147 aa9.02□□□□□ -0.97
RFC4-214ENST00000494047 HES1Q14469 280 aa9.02□□□□□ -0.97
RFC4-214ENST00000494047 FAM104BQ5XKR9 115 aa9.02□□□□□ -0.97
RFC4-214ENST00000494047 LEMD1Q68G75 181 aa9.02□□□□□ -0.97
RFC4-214ENST00000494047 DTX2Q86UW9 622 aa9.02□□□□□ -0.97
RFC4-214ENST00000494047 EXOC3-AS1Q8N2X6 119 aa9.02□□□□□ -0.97
RFC4-214ENST00000494047 Q8N6K4 173 aa9.02□□□□□ -0.97
RFC4-214ENST00000494047 OR9G4Q8NGQ1 327 aa9.02□□□□□ -0.97
RFC4-214ENST00000494047 FAM110DQ8TAY7 271 aaPredicted RBP9.02□□□□□ -0.97
RFC4-214ENST00000494047 URB1-AS1Q96HZ7 61 aa9.02□□□□□ -0.97
RFC4-214ENST00000494047 ANKRD17O75179 2603 aaKnown RBP9.02□□□□□ -0.97
RFC4-214ENST00000494047 HBDP02042 147 aa9.01□□□□□ -0.97
RFC4-214ENST00000494047 ARMS2P0C7Q2 107 aa9.01□□□□□ -0.97
RFC4-214ENST00000494047 PTTG1IPP53801 180 aa9.01□□□□□ -0.97
RFC4-214ENST00000494047 PIFOQ8TCI5 191 aa9.01□□□□□ -0.97
RFC4-214ENST00000494047 ASCL2Q99929 193 aa9.01□□□□□ -0.97
RFC4-214ENST00000494047 SCRT2Q9NQ03 307 aa9.01□□□□□ -0.97
RFC4-214ENST00000494047 CCDC168Q8NDH2 2452 aa9□□□□□ -0.97
RFC4-214ENST00000494047 TRAV8-1A0A0A6YYK1 113 aa9□□□□□ -0.97
RFC4-214ENST00000494047 A6NNC1 897 aa9□□□□□ -0.97
RFC4-214ENST00000494047 COX8AP10176 69 aa9□□□□□ -0.97
RFC4-214ENST00000494047 C11orf71Q6IPW1 123 aa9□□□□□ -0.97
RFC4-214ENST00000494047 LCN12Q6JVE5 192 aa9□□□□□ -0.97
RFC4-214ENST00000494047 SMIM15Q7Z3B0 74 aa9□□□□□ -0.97
RFC4-214ENST00000494047 VMO1Q7Z5L0 202 aa9□□□□□ -0.97
RFC4-214ENST00000494047 STPG4Q8N801 248 aa9□□□□□ -0.97
RFC4-214ENST00000494047 PRELID3AQ96N28 172 aa9□□□□□ -0.97
RFC4-214ENST00000494047 FANCD2OSQ96PS1 177 aa9□□□□□ -0.97
RFC4-214ENST00000494047 PRR25Q96S07 402 aa9□□□□□ -0.97
RFC4-214ENST00000494047 ZNF747Q9BV97 191 aa9□□□□□ -0.97
RFC4-214ENST00000494047 NXT2Q9NPJ8 142 aaKnown RBP9□□□□□ -0.97
RFC4-214ENST00000494047 SMPXQ9UHP9 88 aa9□□□□□ -0.97
RFC4-214ENST00000494047 IGHV3-21A0A0B4J1V1 117 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 A6NDN8 102 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 CD5LO43866 347 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 TMEM11P17152 192 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 DEFB125Q8N687 156 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 FER1L6-AS1Q8NA97 138 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 SGK494Q96LW2 274 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 LENEPQ9Y5L5 61 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 DCHS2Q6V1P9 2916 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 AKAP6Q13023 2319 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 TRBV7-1A0A0A6YYK4 115 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 IGHV2-70DA0A0C4DH43 119 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 LINC01546A6NGU7 62 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 FABP5P3A8MUU1 101 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 K7EP13 123 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 SH2D1AO60880 128 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 POLQO75417 2590 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 NPSP0C0P6 89 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 HINT1P49773 126 aaPredicted RBP8.99□□□□□ -0.97
RFC4-214ENST00000494047 LRBAP50851 2863 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 UBE2E1P51965 193 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 ARF6P62330 175 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 ATOH7Q8N100 152 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 TMUB1Q9BVT8 246 aa8.99□□□□□ -0.97
RFC4-214ENST00000494047 MAP1LC3AQ9H492 121 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 245.8 ms