RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 FSTL3O95633 263 aa5.62□□□□□ -1.51
EPHA3-203ENST00000494014 PAX8Q06710 450 aa5.62□□□□□ -1.51
EPHA3-203ENST00000494014 LOXL1Q08397 574 aaPredicted RBP5.62□□□□□ -1.51
EPHA3-203ENST00000494014 C3AR1Q16581 482 aa5.62□□□□□ -1.51
EPHA3-203ENST00000494014 PATE2Q6UY27 113 aa5.62□□□□□ -1.51
EPHA3-203ENST00000494014 ZNF562Q6V9R5 426 aa5.62□□□□□ -1.51
EPHA3-203ENST00000494014 DLX4Q92988 240 aaPredicted RBP5.62□□□□□ -1.51
EPHA3-203ENST00000494014 FREM1Q5H8C1 2179 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 INS-IGF2F8WCM5 200 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 IGKCP01834 107 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 FAM106CPP0CH98 169 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 ARL3P36405 182 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 RPL32P62910 135 aaKnown RBP5.61□□□□□ -1.51
EPHA3-203ENST00000494014 TBC1D28Q2M2D7 210 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 FAM106AQ4KMX7 169 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 AMTNQ6UX39 209 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 LINC00305Q7Z4B0 112 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 THAP8Q8NA92 274 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 PPP1R35Q8TAP8 253 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 SGK494Q96LW2 274 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 FOXC2Q99958 501 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 DKK2Q9UBU2 259 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 IGKV2D-26A0A0A0MRZ7 120 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 D6R8Y8 96 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 ATP5LO75964 103 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 GRNP28799 593 aaKnown RBP5.61□□□□□ -1.51
EPHA3-203ENST00000494014 SUB1P53999 127 aaKnown RBP eCLIP5.61□□□□□ -1.51
EPHA3-203ENST00000494014 ERHP84090 104 aaKnown RBP5.61□□□□□ -1.51
EPHA3-203ENST00000494014 TWIST1Q15672 202 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 HIST2H2BCQ6DN03 193 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 HHLA3Q9XRX5 114 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 LOC389332A0A1B0GUA5 103 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 GAGE12JA6NER3 117 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 GAGE7O76087 117 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 GAGE12FP0CL80 117 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 GAGE12GP0CL81 117 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 GAGE12IP0CL82 117 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 GAGE4Q13068 117 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 ODF1Q14990 250 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 FAM104BQ5XKR9 115 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 MOGAT3Q86VF5 341 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 OR10X1Q8NGY0 326 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 SRSF12Q8WXF0 261 aaKnown RBP5.61□□□□□ -1.51
EPHA3-203ENST00000494014 OTORQ9NRC9 128 aa5.61□□□□□ -1.51
EPHA3-203ENST00000494014 ICE1Q9Y2F5 2266 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 WI2-2373I1.2A0A1W2PRP0 233 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 PRRG2O14669 202 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 WNT9BO14905 357 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 DPM2O94777 84 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 CELA2AP08217 269 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 SRD5A1P18405 259 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 TEN1Q86WV5 123 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 TMEM158Q8WZ71 300 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 HARBI1Q96MB7 349 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 Q9H3A6 140 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 PRSS29PA6NIE9 313 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 CFHR2P36980 270 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 MEOX1P50221 254 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 FOXG1P55316 489 aaPredicted RBP5.6□□□□□ -1.51
EPHA3-203ENST00000494014 LOXL3P58215 753 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 MLANAQ16655 118 aa5.6□□□□□ -1.51
EPHA3-203ENST00000494014 HEATR1Q9H583 2144 aaKnown RBP5.6□□□□□ -1.51
EPHA3-203ENST00000494014 C16orf97H3BN30 126 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 IGHG4P01861 327 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 IL4P05112 153 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 ZNF688P0C7X2 276 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 MYOD1P15172 320 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 HOXB4P17483 251 aaPredicted RBP5.59□□□□□ -1.51
EPHA3-203ENST00000494014 TUSC5Q8IXB3 177 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 CIARTQ8N365 385 aaPredicted RBP5.59□□□□□ -1.51
EPHA3-203ENST00000494014 SMIM20Q8N5G0 67 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 HIST1H4GQ99525 98 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 FAM173AQ9BQD7 235 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 LINC01546A6NGU7 62 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 RHODO00212 210 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 CNIH1O95406 144 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 ZNF134P52741 427 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 FHL3Q13643 280 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 EDDM3AQ14507 147 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 C11orf53Q8IXP5 236 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 CITED1Q99966 193 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 DCTN5Q9BTE1 182 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 OBP2BQ9NPH6 170 aa5.59□□□□□ -1.51
EPHA3-203ENST00000494014 TEX15Q9BXT5 2789 aa5.59□□□□□ -1.52
EPHA3-203ENST00000494014 TRBV7-3A0A075B6L6 115 aa5.59□□□□□ -1.52
EPHA3-203ENST00000494014 HOXA3O43365 443 aaPredicted RBP5.59□□□□□ -1.52
EPHA3-203ENST00000494014 SAA2P0DJI9 122 aaPredicted RBP5.59□□□□□ -1.52
EPHA3-203ENST00000494014 GP9P14770 177 aa5.59□□□□□ -1.52
EPHA3-203ENST00000494014 FCER1GP30273 86 aa5.59□□□□□ -1.52
EPHA3-203ENST00000494014 SMCPP49901 116 aaPredicted RBP5.59□□□□□ -1.52
EPHA3-203ENST00000494014 ZC2HC1BQ5TFG8 222 aa5.59□□□□□ -1.52
EPHA3-203ENST00000494014 Q6Q795 121 aa5.59□□□□□ -1.52
EPHA3-203ENST00000494014 PRNTQ86SH4 94 aa5.59□□□□□ -1.52
EPHA3-203ENST00000494014 NFE4Q86UQ8 179 aa5.59□□□□□ -1.52
EPHA3-203ENST00000494014 MDP1Q86V88 176 aa5.59□□□□□ -1.52
EPHA3-203ENST00000494014 ZCCHC24Q8N2G6 241 aaKnown RBP5.59□□□□□ -1.52
EPHA3-203ENST00000494014 METRNQ9UJH8 293 aa5.59□□□□□ -1.52
EPHA3-203ENST00000494014 IGKV1D-37A0A075B6S9 117 aa5.58□□□□□ -1.52
EPHA3-203ENST00000494014 CENPVL3A0A0U1RRI6 287 aa5.58□□□□□ -1.52
EPHA3-203ENST00000494014 RFPL3SP0C7P2 107 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms