RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 HBBP68871 147 aa0.28□□□□□ -2.36
SMC4-223ENST00000493695 FKBP1CQ5VVH2 108 aa0.28□□□□□ -2.36
SMC4-223ENST00000493695 TMED4Q7Z7H5 227 aa0.28□□□□□ -2.36
SMC4-223ENST00000493695 IFT20Q8IY31 132 aa0.28□□□□□ -2.36
SMC4-223ENST00000493695 OR13C6PQ8NH95 151 aa0.28□□□□□ -2.36
SMC4-223ENST00000493695 CARD19Q96LW7 228 aa0.28□□□□□ -2.36
SMC4-223ENST00000493695 PBDC1Q9BVG4 233 aa0.28□□□□□ -2.36
SMC4-223ENST00000493695 OR2H1Q9GZK4 316 aa0.28□□□□□ -2.36
SMC4-223ENST00000493695 TCEAL2Q9H3H9 227 aaPredicted RBP0.28□□□□□ -2.36
SMC4-223ENST00000493695 STOML2Q9UJZ1 356 aa0.28□□□□□ -2.36
SMC4-223ENST00000493695 MYH2Q9UKX2 1941 aa0.28□□□□□ -2.36
SMC4-223ENST00000493695 A6NN06 94 aa0.27□□□□□ -2.37
SMC4-223ENST00000493695 LYRM1O43325 122 aa0.27□□□□□ -2.37
SMC4-223ENST00000493695 PIAS1O75925 651 aa0.27□□□□□ -2.37
SMC4-223ENST00000493695 MIR22HGQ0VDD5 57 aa0.27□□□□□ -2.37
SMC4-223ENST00000493695 SNCBQ16143 134 aa0.27□□□□□ -2.37
SMC4-223ENST00000493695 LINC00299Q6ZSB3 139 aa0.27□□□□□ -2.37
SMC4-223ENST00000493695 LINC00269Q8N2A0 174 aa0.27□□□□□ -2.37
SMC4-223ENST00000493695 CCL4L1Q8NHW4 92 aa0.27□□□□□ -2.37
SMC4-223ENST00000493695 AP3S1Q92572 193 aa0.27□□□□□ -2.37
SMC4-223ENST00000493695 PLAC8Q9NZF1 115 aa0.27□□□□□ -2.37
SMC4-223ENST00000493695 NAV3Q8IVL0 2385 aa0.27□□□□□ -2.37
SMC4-223ENST00000493695 ZDBF2Q9HCK1 2354 aa0.27□□□□□ -2.37
SMC4-223ENST00000493695 KIAA1107Q9UPP5 1409 aa0.27□□□□□ -2.37
SMC4-223ENST00000493695 GPR31O00270 319 aa0.26□□□□□ -2.37
SMC4-223ENST00000493695 CST7O76096 145 aa0.26□□□□□ -2.37
SMC4-223ENST00000493695 RPL35P42766 123 aaKnown RBP0.26□□□□□ -2.37
SMC4-223ENST00000493695 LTC4SQ16873 150 aa0.26□□□□□ -2.37
SMC4-223ENST00000493695 PRR15Q8IV56 129 aa0.26□□□□□ -2.37
SMC4-223ENST00000493695 SMIM20Q8N5G0 67 aa0.26□□□□□ -2.37
SMC4-223ENST00000493695 FAM216BQ8N7L0 139 aa0.26□□□□□ -2.37
SMC4-223ENST00000493695 ZCCHC11Q5TAX3 1644 aaKnown RBP0.26□□□□□ -2.37
SMC4-223ENST00000493695 PTPRDP23468 1912 aa0.26□□□□□ -2.37
SMC4-223ENST00000493695 FAT4Q6V0I7 4981 aa0.25□□□□□ -2.37
SMC4-223ENST00000493695 TRBV30A0A0K0K1B3 111 aa0.25□□□□□ -2.37
SMC4-223ENST00000493695 CCL4P13236 92 aa0.25□□□□□ -2.37
SMC4-223ENST00000493695 FXYD4P59646 89 aa0.25□□□□□ -2.37
SMC4-223ENST00000493695 RTL8BQ17RB0 113 aa0.25□□□□□ -2.37
SMC4-223ENST00000493695 CST11Q9H112 138 aa0.25□□□□□ -2.37
SMC4-223ENST00000493695 TAF9BQ9HBM6 251 aa0.25□□□□□ -2.37
SMC4-223ENST00000493695 UFC1Q9Y3C8 167 aa0.25□□□□□ -2.37
SMC4-223ENST00000493695 ZGRF1Q86YA3 2104 aa0.25□□□□□ -2.37
SMC4-223ENST00000493695 YTHDC2Q9H6S0 1430 aaKnown RBP0.24□□□□□ -2.37
SMC4-223ENST00000493695 TRAPPC8Q9Y2L5 1435 aa0.24□□□□□ -2.37
SMC4-223ENST00000493695 TRAV23DV6A0A075B6W5 121 aa0.24□□□□□ -2.37
SMC4-223ENST00000493695 PDE6GP18545 87 aa0.24□□□□□ -2.37
SMC4-223ENST00000493695 ZCCHC23Q6ZST2 131 aa0.24□□□□□ -2.37
SMC4-223ENST00000493695 DIRC1Q969H9 104 aa0.24□□□□□ -2.37
SMC4-223ENST00000493695 LIMD2Q9BT23 127 aa0.24□□□□□ -2.37
SMC4-223ENST00000493695 BOLA2Q9H3K6 86 aa0.24□□□□□ -2.37
SMC4-223ENST00000493695 LRTM1Q9HBL6 345 aa0.24□□□□□ -2.37
SMC4-223ENST00000493695 NIT2Q9NQR4 276 aa0.24□□□□□ -2.37
SMC4-223ENST00000493695 OTORQ9NRC9 128 aa0.24□□□□□ -2.37
SMC4-223ENST00000493695 MAST4O15021 2626 aa0.23□□□□□ -2.37
SMC4-223ENST00000493695 ZNF727A8MUV8 499 aa0.23□□□□□ -2.37
SMC4-223ENST00000493695 TMEM238C9JI98 176 aa0.23□□□□□ -2.37
SMC4-223ENST00000493695 TAS2R41P59536 307 aa0.23□□□□□ -2.37
SMC4-223ENST00000493695 OCIAD2Q56VL3 154 aa0.23□□□□□ -2.37
SMC4-223ENST00000493695 Q6ZS92 163 aa0.23□□□□□ -2.37
SMC4-223ENST00000493695 MCEEQ96PE7 176 aa0.23□□□□□ -2.37
SMC4-223ENST00000493695 FAM103A1Q9BTL3 118 aaKnown RBP0.23□□□□□ -2.37
SMC4-223ENST00000493695 IL20Q9NYY1 176 aa0.23□□□□□ -2.37
SMC4-223ENST00000493695 LAMTOR3Q9UHA4 124 aa0.23□□□□□ -2.37
SMC4-223ENST00000493695 SYNMO15061 1565 aa0.23□□□□□ -2.37
SMC4-223ENST00000493695 MYH3P11055 1940 aa0.23□□□□□ -2.37
SMC4-223ENST00000493695 TECPR2O15040 1411 aa0.22□□□□□ -2.37
SMC4-223ENST00000493695 CTTNBP2Q8WZ74 1663 aa0.22□□□□□ -2.37
SMC4-223ENST00000493695 IGHV3-30P01768 117 aa0.22□□□□□ -2.37
SMC4-223ENST00000493695 IGHV3-30-5P0DP03 117 aa0.22□□□□□ -2.37
SMC4-223ENST00000493695 GLRXP35754 106 aa0.22□□□□□ -2.37
SMC4-223ENST00000493695 PPP1R2P41236 205 aa0.22□□□□□ -2.37
SMC4-223ENST00000493695 Q6ZQY7 126 aa0.22□□□□□ -2.37
SMC4-223ENST00000493695 HOPXQ9BPY8 73 aaPredicted RBP0.22□□□□□ -2.37
SMC4-223ENST00000493695 BDP1A6H8Y1 2624 aa0.22□□□□□ -2.37
SMC4-223ENST00000493695 NAV2Q8IVL1 2488 aa0.22□□□□□ -2.37
SMC4-223ENST00000493695 ANKRD31Q8N7Z5 1873 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 A0A096LPI6 279 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 H3BQV1 296 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 KPNA4O00629 521 aaPredicted RBP0.21□□□□□ -2.38
SMC4-223ENST00000493695 ZNF137PP52743 207 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 TCTAP57738 103 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 SPINK7P58062 85 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 BASP1P80723 227 aaKnown RBP0.21□□□□□ -2.38
SMC4-223ENST00000493695 MRPS36P82909 103 aaKnown RBP0.21□□□□□ -2.38
SMC4-223ENST00000493695 DIAPH2-AS1Q14236 149 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 C10orf111Q8N326 155 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 CDC26Q8NHZ8 85 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 PLAC4Q8WY50 150 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 RMND5BQ96G75 393 aaPredicted RBP0.21□□□□□ -2.38
SMC4-223ENST00000493695 OR4C12Q96R67 309 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 CCL19Q99731 98 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 JPT1Q9UK76 154 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 NUBP2Q9Y5Y2 271 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 USP54Q70EL1 1684 aa0.21□□□□□ -2.38
SMC4-223ENST00000493695 ROCK1Q13464 1354 aa0.2□□□□□ -2.38
SMC4-223ENST00000493695 TRDV1A0A1B0GX56 115 aa0.2□□□□□ -2.38
SMC4-223ENST00000493695 NUPR2A6NF83 97 aa0.2□□□□□ -2.38
SMC4-223ENST00000493695 H7BYZ3 331 aa0.2□□□□□ -2.38
SMC4-223ENST00000493695 FABP4P15090 132 aa0.2□□□□□ -2.38
SMC4-223ENST00000493695 SPINT3P49223 89 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms