RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, human

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP50-218	ENST00000493456	NPVF	Q9HCQ7	196 aa		12.02	□□□□□ -0.49
NUP50-218	ENST00000493456	FUT9	Q9Y231	359 aa		12.02	□□□□□ -0.49
NUP50-218	ENST00000493456	TNFRSF18	Q9Y5U5	241 aa		12.02	□□□□□ -0.49
NUP50-218	ENST00000493456	TRGV1	A0A0A0MS02	117 aa		12.01	□□□□□ -0.49
NUP50-218	ENST00000493456		J3QL48	77 aa		12.01	□□□□□ -0.49
NUP50-218	ENST00000493456	SLC17A3	O00476	420 aa		12.01	□□□□□ -0.49
NUP50-218	ENST00000493456	PAX4	O43316	350 aa		12.01	□□□□□ -0.49
NUP50-218	ENST00000493456	ZNF324	O75467	553 aa	Predicted RBP	12.01	□□□□□ -0.49
NUP50-218	ENST00000493456	SFT2D2	O95562	160 aa		12.01	□□□□□ -0.49
NUP50-218	ENST00000493456	CT45A10	P0DMU9	189 aa		12.01	□□□□□ -0.49
NUP50-218	ENST00000493456	TEPP	Q6URK8	271 aa		12.01	□□□□□ -0.49
NUP50-218	ENST00000493456	ZNF546	Q86UE3	836 aa		12.01	□□□□□ -0.49
NUP50-218	ENST00000493456	C11orf72	Q8NBR9	251 aa		12.01	□□□□□ -0.49
NUP50-218	ENST00000493456	GSN-AS1	Q9NRJ2	163 aa		12.01	□□□□□ -0.49
NUP50-218	ENST00000493456	PSENEN	Q9NZ42	101 aa		12.01	□□□□□ -0.49
NUP50-218	ENST00000493456	DNAH8	Q96JB1	4490 aa		12.01	□□□□□ -0.49
NUP50-218	ENST00000493456	NPIPB6	E9PJ23	425 aa		12	□□□□□ -0.49
NUP50-218	ENST00000493456	RRAS2	P62070	204 aa	Predicted RBP	12	□□□□□ -0.49
NUP50-218	ENST00000493456	ID3	Q02535	119 aa		12	□□□□□ -0.49
NUP50-218	ENST00000493456	SLC38A11	Q08AI6	406 aa		12	□□□□□ -0.49
NUP50-218	ENST00000493456	LINC00467	Q9BRT7	94 aa		12	□□□□□ -0.49
NUP50-218	ENST00000493456	MGAT4C	Q9UBM8	478 aa		12	□□□□□ -0.49
NUP50-218	ENST00000493456	LY96	Q9Y6Y9	160 aa		12	□□□□□ -0.49
NUP50-218	ENST00000493456	HMCN2	Q8NDA2	5059 aa		11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	LINC00854	A0A1B0GVQ3	168 aa		11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	SLC25A5	P05141	298 aa	Known RBP	11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	SNRPC	P09234	159 aa	Known RBP	11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	IGLC2	P0DOY2	106 aa		11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	POLR2G	P62487	172 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	SLA	Q13239	276 aa		11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	PPP1R1A	Q13522	171 aa		11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	SPCS2	Q15005	226 aa		11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	ANXA2R	Q3ZCQ2	193 aa		11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	ST6GAL2	Q96JF0	529 aa		11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	TMEM70	Q9BUB7	260 aa		11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	MSRB1	Q9NZV6	116 aa		11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	CCDC59	Q9P031	241 aa	Known RBP	11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	PRO0255	Q9UI72	69 aa		11.99	□□□□□ -0.49
NUP50-218	ENST00000493456	C7orf71	A4D174	169 aa		11.98	□□□□□ -0.49
NUP50-218	ENST00000493456	GOSR2	O14653	212 aa		11.98	□□□□□ -0.49
NUP50-218	ENST00000493456	SSSCA1	O60232	199 aa		11.98	□□□□□ -0.49
NUP50-218	ENST00000493456	SPINK4	O60575	86 aa		11.98	□□□□□ -0.49
NUP50-218	ENST00000493456	TCL1A	P56279	114 aa		11.98	□□□□□ -0.49
NUP50-218	ENST00000493456	AP3S2	P59780	193 aa		11.98	□□□□□ -0.49
NUP50-218	ENST00000493456	LYPD5	Q6UWN5	251 aa		11.98	□□□□□ -0.49
NUP50-218	ENST00000493456	EIF4E3	Q8N5X7	224 aa	Known RBP	11.98	□□□□□ -0.49
NUP50-218	ENST00000493456	SAT2	Q96F10	170 aa	Predicted RBP	11.98	□□□□□ -0.49
NUP50-218	ENST00000493456		H3BTX0	84 aa		11.97	□□□□□ -0.49
NUP50-218	ENST00000493456	COX7A2P2	O60397	106 aa		11.97	□□□□□ -0.49
NUP50-218	ENST00000493456	SMIM18	P0DKX4	95 aa		11.97	□□□□□ -0.49
NUP50-218	ENST00000493456	MRPL23	Q16540	153 aa	Known RBP	11.97	□□□□□ -0.49
NUP50-218	ENST00000493456	GUK1	Q16774	197 aa		11.97	□□□□□ -0.49
NUP50-218	ENST00000493456	TMEM14EP	Q6UXP3	125 aa		11.97	□□□□□ -0.49
NUP50-218	ENST00000493456	OR10P1	Q8NGE3	313 aa		11.97	□□□□□ -0.49
NUP50-218	ENST00000493456	SMIM8	Q96KF7	97 aa		11.97	□□□□□ -0.49
NUP50-218	ENST00000493456	SOST	Q9BQB4	213 aa		11.97	□□□□□ -0.49
NUP50-218	ENST00000493456	FABP12	A6NFH5	140 aa		11.96	□□□□□ -0.49
NUP50-218	ENST00000493456	AGPAT2	O15120	278 aa		11.96	□□□□□ -0.49
NUP50-218	ENST00000493456	CCNK	O75909	580 aa		11.96	□□□□□ -0.49
NUP50-218	ENST00000493456	METTL15P1	P0C7V9	234 aa		11.96	□□□□□ -0.49
NUP50-218	ENST00000493456	EVI2A	P22794	236 aa		11.96	□□□□□ -0.49
NUP50-218	ENST00000493456	IBA57	Q5T440	356 aa	Known RBP	11.96	□□□□□ -0.49
NUP50-218	ENST00000493456	NEGR1	Q7Z3B1	354 aa		11.96	□□□□□ -0.49
NUP50-218	ENST00000493456	VGLL1	Q99990	258 aa		11.96	□□□□□ -0.49
NUP50-218	ENST00000493456	KLLN	B2CW77	178 aa		11.95	□□□□□ -0.5
NUP50-218	ENST00000493456	CRYBA4	P53673	196 aa		11.95	□□□□□ -0.5
NUP50-218	ENST00000493456	UBE2M	P61081	183 aa	Known RBP	11.95	□□□□□ -0.5
NUP50-218	ENST00000493456	OPCML	Q14982	345 aa		11.95	□□□□□ -0.5
NUP50-218	ENST00000493456	TOMM5	Q8N4H5	51 aa		11.95	□□□□□ -0.5
NUP50-218	ENST00000493456	MCFD2	Q8NI22	146 aa		11.95	□□□□□ -0.5
NUP50-218	ENST00000493456	DEDD2	Q8WXF8	326 aa		11.95	□□□□□ -0.5
NUP50-218	ENST00000493456	TMEM37	Q8WXS4	190 aa		11.95	□□□□□ -0.5
NUP50-218	ENST00000493456	TRIM63	Q969Q1	353 aa		11.95	□□□□□ -0.5
NUP50-218	ENST00000493456	MRPL53	Q96EL3	112 aa	Known RBP	11.95	□□□□□ -0.5
NUP50-218	ENST00000493456	HHLA3	Q9XRX5	114 aa		11.95	□□□□□ -0.5
NUP50-218	ENST00000493456	KLF12	Q9Y4X4	402 aa		11.95	□□□□□ -0.5
NUP50-218	ENST00000493456	IGLV5-52	A0A0A0MRZ9	124 aa		11.94	□□□□□ -0.5
NUP50-218	ENST00000493456		H3BQ15	152 aa		11.94	□□□□□ -0.5
NUP50-218	ENST00000493456	ZNF253	O75346	499 aa		11.94	□□□□□ -0.5
NUP50-218	ENST00000493456	IGHV3-53	P01767	116 aa		11.94	□□□□□ -0.5
NUP50-218	ENST00000493456	HAMP	P81172	84 aa		11.94	□□□□□ -0.5
NUP50-218	ENST00000493456	MORN5	Q5VZ52	161 aa		11.94	□□□□□ -0.5
NUP50-218	ENST00000493456	C10orf113	Q5VZT2	155 aa		11.94	□□□□□ -0.5
NUP50-218	ENST00000493456	DYNC2LI1	Q8TCX1	351 aa		11.94	□□□□□ -0.5
NUP50-218	ENST00000493456	NTN5	Q8WTR8	489 aa	Predicted RBP	11.94	□□□□□ -0.5
NUP50-218	ENST00000493456	GGACT	Q9BVM4	153 aa		11.94	□□□□□ -0.5
NUP50-218	ENST00000493456	UBR4	Q5T4S7	5183 aa		11.94	□□□□□ -0.5
NUP50-218	ENST00000493456	OR4E1	P0C645	316 aa		11.93	□□□□□ -0.5
NUP50-218	ENST00000493456	C10orf126	Q8N4M7	172 aa		11.93	□□□□□ -0.5
NUP50-218	ENST00000493456	TSC22D2	O75157	780 aa		11.92	□□□□□ -0.5
NUP50-218	ENST00000493456	MPDU1	O75352	247 aa		11.92	□□□□□ -0.5
NUP50-218	ENST00000493456	SRI	P30626	198 aa		11.92	□□□□□ -0.5
NUP50-218	ENST00000493456	TNFSF8	P32971	234 aa		11.92	□□□□□ -0.5
NUP50-218	ENST00000493456	TAS2R30	P59541	319 aa		11.92	□□□□□ -0.5
NUP50-218	ENST00000493456	BTN1A1	Q13410	526 aa		11.92	□□□□□ -0.5
NUP50-218	ENST00000493456	WFDC10B	Q8IUB3	73 aa		11.92	□□□□□ -0.5
NUP50-218	ENST00000493456	RAB2B	Q8WUD1	216 aa		11.92	□□□□□ -0.5
NUP50-218	ENST00000493456	FAM19A4	Q96LR4	140 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms