RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 RELAQ04206 551 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 EIF3IQ13347 325 aaKnown RBP1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 MSMO1Q15800 293 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 ZNF79Q15937 498 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 KTN1-AS1Q86SY8 53 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 LHFPL1Q86WI0 220 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 C4orf33Q8N1A6 199 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 OR9Q1Q8NGQ5 310 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 ACOT12Q8WYK0 555 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 PSMF1Q92530 271 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 SPIN2AQ99865 258 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 SPIN2BQ9BPZ2 258 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 HSPB9Q9BQS6 159 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 DERL1Q9BUN8 251 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 ASH1LQ9NR48 2969 aaKnown RBP1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 RNF11Q9Y3C5 154 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 MED31Q9Y3C7 131 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 KIF25-AS1Q9Y6Z4 181 aa1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 SPTAN1Q13813 2472 aaKnown RBP1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 MAP1AP78559 2803 aaPredicted RBP1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 TNRC6AQ8NDV7 1962 aaKnown RBP1.98□□□□□ -2.09
DEPDC1-204ENST00000489862 BAHCC1Q9P281 2608 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 LRBAP50851 2863 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 ITPR2Q14571 2701 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 FBN2P35556 2912 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 IGLV3-12A0A075B6K2 115 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 A0A087WUU8 490 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 A0A0B4J2C4 111 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 DUXBA0A1W2PPF3 345 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 H3BQF6 201 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 J3KT08 172 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 IGLV1-47P01700 117 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 IL1RNP18510 177 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 RPS4Y1P22090 263 aaKnown RBP1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 PSMB8P28062 276 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 S100A11P31949 105 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 RAB13P51153 203 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 HIST1H1AQ02539 215 aaPredicted RBP1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 AADACL3Q5VUY0 350 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 ZFAND6Q6FIF0 208 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 RPL13AP3Q6NVV1 102 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 CROCCP2Q86T23 111 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 RPP25LQ8N5L8 163 aaKnown RBP1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 OR8A1Q8NGG7 326 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 EXOSC8Q96B26 276 aaKnown RBP1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 TOMM6Q96B49 74 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 UPK3BQ9BT76 320 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 TPT1P8Q9HAU6 139 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 IL36BQ9NZH7 164 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 PAIP2BQ9ULR5 123 aaKnown RBP1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 FUT9Q9Y231 359 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 TMEM14AQ9Y6G1 99 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 U3KQ87 197 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 POLEQ07864 2286 aa1.97□□□□□ -2.09
DEPDC1-204ENST00000489862 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 TRAV9-1A0A075B6T8 112 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 IGKV3D-11A0A0A0MRZ8 115 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 IGKV1-9A0A0C4DH69 117 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 J3QRK9 145 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 M0R378 163 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 LEPROTO15243 131 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 CLPSP04118 112 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 SRP19P09132 144 aaKnown RBP1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 UBBP0CG47 229 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 HLA-DMBP28068 263 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 CMPK1P30085 196 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 CD200P41217 278 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 DCDP81605 110 aaKnown RBP1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 DEFB109BQ30KR1 87 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 DEFB134Q4QY38 66 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 C10orf91Q5T1B1 145 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 GLT8D1Q68CQ7 371 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 PRSS54Q6PEW0 395 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 SCIMPQ6UWF3 145 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 ZFP2Q6ZN57 461 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 ZCCHC23Q6ZST2 131 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 RNASE11Q8TAA1 199 aaKnown RBP1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 TSLPQ969D9 159 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 SLAMF6Q96DU3 332 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 LINC00167Q96N53 147 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 MRPL57Q9BQC6 102 aaKnown RBP1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 PBOV1Q9GZY1 135 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 KLK5Q9Y337 293 aaPredicted RBP1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 ICOSQ9Y6W8 199 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 HIVEP3Q5T1R4 2406 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 MED12Q93074 2177 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 SHANK1Q9Y566 2161 aa1.96□□□□□ -2.1
DEPDC1-204ENST00000489862 CSMD2Q7Z408 3487 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 TEX15Q9BXT5 2789 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 TRDV1A0A1B0GX56 115 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 TMEM189A5PLL7 270 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 C9JAW5 83 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 GABARAPH6UMI1 98 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 K7ERS5 55 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 TAX1BP3O14907 124 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 CYB5BO43169 146 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 OR2T1O43869 369 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 IGF2P01344 180 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 COX6A1P12074 109 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 COX4I1P13073 169 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms