RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 SLC35B3Q9H1N7 401 aa11.34□□□□□ -0.59
CTNS-206ENST00000488623 TMEM218A2RU14 115 aa11.33□□□□□ -0.6
CTNS-206ENST00000488623 TMEM250H0YL14 139 aa11.33□□□□□ -0.6
CTNS-206ENST00000488623 ISLRO14498 428 aa11.33□□□□□ -0.6
CTNS-206ENST00000488623 CD33P20138 364 aa11.33□□□□□ -0.6
CTNS-206ENST00000488623 LCN12Q6JVE5 192 aa11.33□□□□□ -0.6
CTNS-206ENST00000488623 CYB561D1Q8N8Q1 229 aa11.33□□□□□ -0.6
CTNS-206ENST00000488623 C11orf52Q96A22 123 aa11.33□□□□□ -0.6
CTNS-206ENST00000488623 PRELID1Q9Y255 219 aa11.33□□□□□ -0.6
CTNS-206ENST00000488623 TRRAPQ9Y4A5 3859 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 TRAV2A0A0B4J234 112 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 DIRC3C9JPN6 131 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 PRAC2D3DTV9 90 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 PEX7O00628 323 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 TCRAP04437 139 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 SFTA3P0C7M3 94 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 ID1P41134 155 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 OR2K2Q8NGT1 345 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 CMTM2Q8TAZ6 248 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 MRPL53Q96EL3 112 aaKnown RBP11.32□□□□□ -0.6
CTNS-206ENST00000488623 LINC00479Q96M42 142 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 LINC00052Q96N35 136 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 TCEAL7Q9BRU2 100 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 CLEC5AQ9NY25 188 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 RPH3ALQ9UNE2 315 aa11.32□□□□□ -0.6
CTNS-206ENST00000488623 CMYA5Q8N3K9 4069 aa11.31□□□□□ -0.6
CTNS-206ENST00000488623 SORL1Q92673 2214 aa11.31□□□□□ -0.6
CTNS-206ENST00000488623 CSN1S1P47710 185 aa11.31□□□□□ -0.6
CTNS-206ENST00000488623 CEBPGP53567 150 aa11.31□□□□□ -0.6
CTNS-206ENST00000488623 PRR31Q5SQ13 230 aa11.31□□□□□ -0.6
CTNS-206ENST00000488623 C9orf66Q5T8R8 295 aa11.31□□□□□ -0.6
CTNS-206ENST00000488623 SAMD13Q5VXD3 122 aa11.31□□□□□ -0.6
CTNS-206ENST00000488623 ARL6IP6Q8N6S5 226 aa11.31□□□□□ -0.6
CTNS-206ENST00000488623 C2CD4CQ8TF44 421 aa11.31□□□□□ -0.6
CTNS-206ENST00000488623 HIST1H2BAQ96A08 127 aa11.31□□□□□ -0.6
CTNS-206ENST00000488623 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
CTNS-206ENST00000488623 ZNF256Q9Y2P7 627 aaPredicted RBP11.31□□□□□ -0.6
CTNS-206ENST00000488623 ZNF688P0C7X2 276 aa11.3□□□□□ -0.6
CTNS-206ENST00000488623 IGLL1P15814 213 aa11.3□□□□□ -0.6
CTNS-206ENST00000488623 INSL3P51460 131 aa11.3□□□□□ -0.6
CTNS-206ENST00000488623 DEFB1P60022 68 aa11.3□□□□□ -0.6
CTNS-206ENST00000488623 GUCA2BQ16661 112 aa11.3□□□□□ -0.6
CTNS-206ENST00000488623 GOLT1AQ6ZVE7 132 aa11.3□□□□□ -0.6
CTNS-206ENST00000488623 RPUSD4Q96CM3 377 aaKnown RBP11.3□□□□□ -0.6
CTNS-206ENST00000488623 ATG101Q9BSB4 218 aa11.3□□□□□ -0.6
CTNS-206ENST00000488623 DERL1Q9BUN8 251 aa11.3□□□□□ -0.6
CTNS-206ENST00000488623 MCRIP2Q9BUT9 160 aaKnown RBP11.3□□□□□ -0.6
CTNS-206ENST00000488623 VWFP04275 2813 aa11.3□□□□□ -0.6
CTNS-206ENST00000488623 PKD1L1Q8TDX9 2849 aa11.29□□□□□ -0.6
CTNS-206ENST00000488623 TRAV34A0A0B4J273 112 aa11.29□□□□□ -0.6
CTNS-206ENST00000488623 ADCYAP1P18509 176 aa11.29□□□□□ -0.6
CTNS-206ENST00000488623 SOHLH1Q5JUK2 328 aa11.29□□□□□ -0.6
CTNS-206ENST00000488623 ZNF738Q8NE65 137 aa11.29□□□□□ -0.6
CTNS-206ENST00000488623 SGK494Q96LW2 274 aa11.29□□□□□ -0.6
CTNS-206ENST00000488623 PARLQ9H300 379 aa11.29□□□□□ -0.6
CTNS-206ENST00000488623 KLF12Q9Y4X4 402 aa11.29□□□□□ -0.6
CTNS-206ENST00000488623 MGAM2Q2M2H8 2515 aa11.28□□□□□ -0.6
CTNS-206ENST00000488623 IGKV2-40A0A087WW87 121 aaPredicted RBP11.28□□□□□ -0.6
CTNS-206ENST00000488623 OR4C46A6NHA9 309 aa11.28□□□□□ -0.6
CTNS-206ENST00000488623 IGKV2D-40P01614 121 aaPredicted RBP11.28□□□□□ -0.6
CTNS-206ENST00000488623 IGLV2-11P01706 119 aa11.28□□□□□ -0.6
CTNS-206ENST00000488623 AKR1C3P42330 323 aa11.28□□□□□ -0.6
CTNS-206ENST00000488623 RPL35P42766 123 aaKnown RBP11.28□□□□□ -0.6
CTNS-206ENST00000488623 SNRPD3P62318 126 aaKnown RBP11.28□□□□□ -0.6
CTNS-206ENST00000488623 ZNF674Q2M3X9 581 aa11.28□□□□□ -0.6
CTNS-206ENST00000488623 PSMG4Q5JS54 123 aa11.28□□□□□ -0.6
CTNS-206ENST00000488623 C10orf91Q5T1B1 145 aa11.28□□□□□ -0.6
CTNS-206ENST00000488623 TRAV8-1A0A0A6YYK1 113 aa11.27□□□□□ -0.61
CTNS-206ENST00000488623 F8W036 122 aa11.27□□□□□ -0.61
CTNS-206ENST00000488623 ATP6V1G1O75348 118 aa11.27□□□□□ -0.61
CTNS-206ENST00000488623 ZNF705DP0CH99 300 aaPredicted RBP11.27□□□□□ -0.61
CTNS-206ENST00000488623 ZNF705BP0CI00 300 aaPredicted RBP11.27□□□□□ -0.61
CTNS-206ENST00000488623 CNN1P51911 297 aaKnown RBP11.27□□□□□ -0.61
CTNS-206ENST00000488623 ERCC8Q13216 396 aa11.27□□□□□ -0.61
CTNS-206ENST00000488623 TMEM183BQ1AE95 376 aa11.27□□□□□ -0.61
CTNS-206ENST00000488623 BEAN1Q3B7T3 259 aa11.27□□□□□ -0.61
CTNS-206ENST00000488623 VGLL1Q99990 258 aa11.27□□□□□ -0.61
CTNS-206ENST00000488623 SERTM2A0A1B0GWG4 89 aa11.26□□□□□ -0.61
CTNS-206ENST00000488623 RBAKDNA6NC62 111 aa11.26□□□□□ -0.61
CTNS-206ENST00000488623 ZNF727A8MUV8 499 aa11.26□□□□□ -0.61
CTNS-206ENST00000488623 F6UB75 175 aa11.26□□□□□ -0.61
CTNS-206ENST00000488623 S100A9P06702 114 aaKnown RBP11.26□□□□□ -0.61
CTNS-206ENST00000488623 TAS2R60P59551 318 aa11.26□□□□□ -0.61
CTNS-206ENST00000488623 DEFB131AP59861 70 aa11.26□□□□□ -0.61
CTNS-206ENST00000488623 FAM74A3Q4VXF1 159 aa11.26□□□□□ -0.61
CTNS-206ENST00000488623 SMIM7Q9BQ49 75 aa11.26□□□□□ -0.61
CTNS-206ENST00000488623 SEC11CQ9BY50 192 aa11.26□□□□□ -0.61
CTNS-206ENST00000488623 AGPAT4-IT1Q9H0P7 198 aa11.26□□□□□ -0.61
CTNS-206ENST00000488623 TRBV20OR9-2A0A075B6H5 130 aa11.25□□□□□ -0.61
CTNS-206ENST00000488623 TRBV6-1A0A0K0K1D8 114 aa11.25□□□□□ -0.61
CTNS-206ENST00000488623 KRBOX1C9JBD0 128 aa11.25□□□□□ -0.61
CTNS-206ENST00000488623 K7EQM0 130 aa11.25□□□□□ -0.61
CTNS-206ENST00000488623 WIPF1O43516 503 aa11.25□□□□□ -0.61
CTNS-206ENST00000488623 TMEM75Q8N9X5 138 aa11.25□□□□□ -0.61
CTNS-206ENST00000488623 OR8A1Q8NGG7 326 aa11.25□□□□□ -0.61
CTNS-206ENST00000488623 FMC1Q96HJ9 113 aa11.25□□□□□ -0.61
CTNS-206ENST00000488623 IGF2BP2-AS1Q96M15 143 aa11.25□□□□□ -0.61
CTNS-206ENST00000488623 ASCL2Q99929 193 aa11.25□□□□□ -0.61
CTNS-206ENST00000488623 MAP6D1Q9H9H5 199 aa11.25□□□□□ -0.61
CTNS-206ENST00000488623 PSG8Q9UQ74 426 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms