RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 PGPA6NDG6 321 aa9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 FABP5P3A8MUU1 101 aa9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 NDUFS7O75251 213 aa9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 HBDP02042 147 aa9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 COL8A1P27658 744 aa9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 GTSCR1Q86UQ5 136 aa9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 ZNF492Q9P255 531 aa9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 A0A087WX48 190 aa9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 WI2-2373I1.2A0A1W2PRP0 233 aa9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 FCER1GP30273 86 aa9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 IGFL2Q6UWQ7 119 aa9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 MRPL20Q9BYC9 149 aaKnown RBP9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 HHLA3Q9XRX5 114 aa9.17□□□□□ -0.94
SEC61A1-205ENST00000483956 D6R8Y8 96 aa9.16□□□□□ -0.94
SEC61A1-205ENST00000483956 TMEM167AQ8TBQ9 72 aa9.16□□□□□ -0.94
SEC61A1-205ENST00000483956 CITED1Q99966 193 aa9.16□□□□□ -0.94
SEC61A1-205ENST00000483956 CIARTQ8N365 385 aaPredicted RBP9.16□□□□□ -0.94
SEC61A1-205ENST00000483956 FAM216BQ8N7L0 139 aa9.16□□□□□ -0.94
SEC61A1-205ENST00000483956 DSPP15924 2871 aaKnown RBP9.16□□□□□ -0.94
SEC61A1-205ENST00000483956 M0R1B8 84 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 SCGB2A1O75556 95 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 SUB1P53999 127 aaKnown RBP eCLIP9.15□□□□□ -0.941e-8■■□□□ 14.2
SEC61A1-205ENST00000483956 ATP5J2P56134 94 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 NDUFV3P56181 108 aaKnown RBP9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 WT1-ASQ06250 92 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 TEX36Q5VZQ5 186 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 PDPNQ86YL7 162 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 RND1Q92730 232 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 CCL13Q99616 98 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 TPPP3Q9BW30 176 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 ZNRD1Q9P1U0 126 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 TRAV8-1A0A0A6YYK1 113 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 TRAV17A0A0B4J275 112 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 MBD3L4A6NDZ8 208 aaPredicted RBP9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 MBD3L3A6NE82 208 aaPredicted RBP9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 MBD3L5A6NJ08 208 aaPredicted RBP9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 H3BTX0 84 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 SFTA2Q6UW10 78 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 MBD3L2Q8NHZ7 208 aaPredicted RBP9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 NPIPB3Q92617 1050 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 AJUBAQ96IF1 538 aa9.15□□□□□ -0.94
SEC61A1-205ENST00000483956 BOD1L1Q8NFC6 3051 aa9.15□□□□□ -0.95
SEC61A1-205ENST00000483956 CGB1A6NKQ9 187 aa9.15□□□□□ -0.95
SEC61A1-205ENST00000483956 E7EUB6 86 aa9.15□□□□□ -0.95
SEC61A1-205ENST00000483956 CDX4O14627 284 aaPredicted RBP9.15□□□□□ -0.95
SEC61A1-205ENST00000483956 TNFAIP6P98066 277 aaPredicted RBP9.15□□□□□ -0.95
SEC61A1-205ENST00000483956 LINC00305Q7Z4B0 112 aa9.15□□□□□ -0.95
SEC61A1-205ENST00000483956 MAPKAPK5-AS1Q8N8E1 139 aa9.15□□□□□ -0.95
SEC61A1-205ENST00000483956 FDCSPQ8NFU4 85 aa9.15□□□□□ -0.95
SEC61A1-205ENST00000483956 PPDPFQ9H3Y8 114 aa9.15□□□□□ -0.95
SEC61A1-205ENST00000483956 IGHV1-46P01743 117 aa9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 RIGQ13278 110 aa9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 PLA2G2CQ5R387 149 aa9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 ZCCHC24Q8N2G6 241 aaKnown RBP9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 PIFOQ8TCI5 191 aa9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 PPDPFLQ8WWR9 84 aa9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 FLYWCH2Q96CP2 140 aaKnown RBP9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 VPREB3Q9UKI3 123 aa9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 PAX8Q06710 450 aa9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 SRSF1Q07955 248 aaKnown RBP eCLIP9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 MORN3Q6PF18 240 aaPredicted RBP9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 SEM1Q6ZVN7 128 aa9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 DEFB108BQ8NET1 73 aa9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 OR4C13Q8NGP0 309 aa9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 SRSF12Q8WXF0 261 aaKnown RBP9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 FMC1Q96HJ9 113 aa9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 HIST1H4GQ99525 98 aa9.14□□□□□ -0.95
SEC61A1-205ENST00000483956 CADP27708 2225 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 RHODO00212 210 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 RBMXL3Q8N7X1 1067 aaKnown RBP9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 MUC6Q6W4X9 2439 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 TMSB15BA0A087X1C1 80 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 M0QXV9 152 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 SRD5A1P18405 259 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 CCL11P51671 97 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 PVRIGQ6DKI7 326 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 C8orf46Q8TAG6 207 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 TMEM133Q9H2Q1 129 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 DCHS1Q96JQ0 3298 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 IGHV3-48P01763 117 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 PSMB2P49721 201 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 KLF17Q5JT82 389 aaPredicted RBP9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 ZC2HC1BQ5TFG8 222 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 Q6ZS92 163 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 DLX4Q92988 240 aaPredicted RBP9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 ASCL2Q99929 193 aa9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 MRPL36Q9P0J6 103 aaKnown RBP9.13□□□□□ -0.95
SEC61A1-205ENST00000483956 NAV3Q8IVL0 2385 aa9.12□□□□□ -0.95
SEC61A1-205ENST00000483956 IGLV2-23P01705 113 aa9.12□□□□□ -0.95
SEC61A1-205ENST00000483956 ZNF474Q6S9Z5 364 aaPredicted RBP9.12□□□□□ -0.95
SEC61A1-205ENST00000483956 AMN1Q8IY45 258 aa9.12□□□□□ -0.95
SEC61A1-205ENST00000483956 C8orf31Q8N9H6 132 aa9.12□□□□□ -0.95
SEC61A1-205ENST00000483956 RITA1Q96K30 269 aa9.12□□□□□ -0.95
SEC61A1-205ENST00000483956 SSUH2Q9Y2M2 353 aa9.12□□□□□ -0.95
SEC61A1-205ENST00000483956 ZNF688P0C7X2 276 aa9.12□□□□□ -0.95
SEC61A1-205ENST00000483956 PRB4P10163 310 aaPredicted RBP9.12□□□□□ -0.95
SEC61A1-205ENST00000483956 FAM159AQ6UWV7 190 aa9.12□□□□□ -0.95
SEC61A1-205ENST00000483956 TEN1Q86WV5 123 aa9.12□□□□□ -0.95
SEC61A1-205ENST00000483956 TRGV9Q99603 122 aa9.12□□□□□ -0.95
SEC61A1-205ENST00000483956 SMKR1H3BMG3 65 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms