RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 FOXE3Q13461 319 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 ODF1Q14990 250 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 C17orf77Q96MU5 243 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 C8orf49Q96NF6 230 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 VGLL1Q99990 258 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 FBXL15Q9H469 300 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 SPAARA0A1B0GVQ0 90 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 LINC01619G3V211 115 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 IGKCP01834 107 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 FCGR2BP31994 310 aaPredicted RBP11.23□□□□□ -0.61
NR1H3-220ENST00000481020 TWIST1Q15672 202 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 DEFB109BQ30KR1 87 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 NPBQ8NG41 125 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 HHLA3Q9XRX5 114 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 HILPDAQ9Y5L2 63 aa11.23□□□□□ -0.61
NR1H3-220ENST00000481020 GNG7O60262 68 aa11.22□□□□□ -0.61
NR1H3-220ENST00000481020 DPM2O94777 84 aa11.22□□□□□ -0.61
NR1H3-220ENST00000481020 NDUFA3O95167 84 aa11.22□□□□□ -0.61
NR1H3-220ENST00000481020 CNIH1O95406 144 aa11.22□□□□□ -0.61
NR1H3-220ENST00000481020 RAB9AP51151 201 aa11.22□□□□□ -0.61
NR1H3-220ENST00000481020 PCP2Q8IVA1 136 aa11.22□□□□□ -0.61
NR1H3-220ENST00000481020 BCL6BQ8N143 479 aaPredicted RBP11.22□□□□□ -0.61
NR1H3-220ENST00000481020 CHAC1Q9BUX1 264 aa11.22□□□□□ -0.61
NR1H3-220ENST00000481020 RBAKDNA6NC62 111 aa11.21□□□□□ -0.61
NR1H3-220ENST00000481020 RIPPLY3P57055 190 aa11.21□□□□□ -0.61
NR1H3-220ENST00000481020 BSPH1Q075Z2 132 aa11.21□□□□□ -0.61
NR1H3-220ENST00000481020 ZNF562Q6V9R5 426 aa11.21□□□□□ -0.61
NR1H3-220ENST00000481020 C22orf34Q6ZV56 151 aa11.21□□□□□ -0.61
NR1H3-220ENST00000481020 ARPC1AQ92747 370 aa11.21□□□□□ -0.61
NR1H3-220ENST00000481020 DYNLRB1Q9NP97 96 aa11.21□□□□□ -0.61
NR1H3-220ENST00000481020 EP300Q09472 2414 aaPredicted RBP11.21□□□□□ -0.62
NR1H3-220ENST00000481020 FABP5P3A8MUU1 101 aa11.21□□□□□ -0.62
NR1H3-220ENST00000481020 M0R3E3 92 aa11.21□□□□□ -0.62
NR1H3-220ENST00000481020 NBR2O15453 112 aa11.21□□□□□ -0.62
NR1H3-220ENST00000481020 KLK10O43240 276 aa11.21□□□□□ -0.62
NR1H3-220ENST00000481020 EGR2P11161 476 aaPredicted RBP11.21□□□□□ -0.62
NR1H3-220ENST00000481020 KLF17Q5JT82 389 aaPredicted RBP11.21□□□□□ -0.62
NR1H3-220ENST00000481020 FOXI2Q6ZQN5 318 aa11.21□□□□□ -0.62
NR1H3-220ENST00000481020 WFDC8Q8IUA0 241 aa11.21□□□□□ -0.62
NR1H3-220ENST00000481020 CEND1Q8N111 149 aa11.21□□□□□ -0.62
NR1H3-220ENST00000481020 Q8N8P6 123 aa11.21□□□□□ -0.62
NR1H3-220ENST00000481020 PHLDA1Q8WV24 401 aaPredicted RBP11.21□□□□□ -0.62
NR1H3-220ENST00000481020 RNF185Q96GF1 192 aa11.21□□□□□ -0.62
NR1H3-220ENST00000481020 IGLV11-55A0A075B6I3 123 aa11.2□□□□□ -0.62
NR1H3-220ENST00000481020 E9PLD3 99 aa11.2□□□□□ -0.62
NR1H3-220ENST00000481020 APELAP0DMC3 54 aa11.2□□□□□ -0.62
NR1H3-220ENST00000481020 SAMD13Q5VXD3 122 aa11.2□□□□□ -0.62
NR1H3-220ENST00000481020 Q71RC1 249 aaPredicted RBP11.2□□□□□ -0.62
NR1H3-220ENST00000481020 RAB37Q96AX2 223 aa11.2□□□□□ -0.62
NR1H3-220ENST00000481020 DKK2Q9UBU2 259 aa11.2□□□□□ -0.62
NR1H3-220ENST00000481020 GCSHP23434 173 aa11.19□□□□□ -0.62
NR1H3-220ENST00000481020 LEPP41159 167 aa11.19□□□□□ -0.62
NR1H3-220ENST00000481020 SRSF6Q13247 344 aaKnown RBP11.19□□□□□ -0.62
NR1H3-220ENST00000481020 NAV3Q8IVL0 2385 aa11.19□□□□□ -0.62
NR1H3-220ENST00000481020 TRBV25-1A0A075B6N4 114 aa11.18□□□□□ -0.62
NR1H3-220ENST00000481020 TNFRSF6BO95407 300 aa11.18□□□□□ -0.62
NR1H3-220ENST00000481020 GFRALQ6UXV0 394 aa11.18□□□□□ -0.62
NR1H3-220ENST00000481020 SIGMAR1Q99720 223 aa11.18□□□□□ -0.62
NR1H3-220ENST00000481020 ASCL2Q99929 193 aa11.18□□□□□ -0.62
NR1H3-220ENST00000481020 B9A039 149 aa11.18□□□□□ -0.62
NR1H3-220ENST00000481020 PRSS1P07477 247 aa11.18□□□□□ -0.62
NR1H3-220ENST00000481020 PLNP26678 52 aa11.18□□□□□ -0.62
NR1H3-220ENST00000481020 ZNF672Q499Z4 452 aaPredicted RBP11.18□□□□□ -0.62
NR1H3-220ENST00000481020 TTC9CQ8N5M4 171 aa11.18□□□□□ -0.62
NR1H3-220ENST00000481020 OR11H6Q8NGC7 330 aa11.18□□□□□ -0.62
NR1H3-220ENST00000481020 TMSB15BA0A087X1C1 80 aa11.17□□□□□ -0.62
NR1H3-220ENST00000481020 PPIAL4CA0A0B4J2A2 164 aa11.17□□□□□ -0.62
NR1H3-220ENST00000481020 PRRG2O14669 202 aa11.17□□□□□ -0.62
NR1H3-220ENST00000481020 PPIAL4GP0DN37 164 aa11.17□□□□□ -0.62
NR1H3-220ENST00000481020 FXYD2P54710 66 aa11.17□□□□□ -0.62
NR1H3-220ENST00000481020 CD300EQ496F6 205 aaPredicted RBP11.17□□□□□ -0.62
NR1H3-220ENST00000481020 PSMG3-AS1Q96PY0 264 aa11.17□□□□□ -0.62
NR1H3-220ENST00000481020 C21orf62Q9NYP8 219 aa11.17□□□□□ -0.62
NR1H3-220ENST00000481020 DPM3Q9P2X0 92 aa11.17□□□□□ -0.62
NR1H3-220ENST00000481020 MUC6Q6W4X9 2439 aa11.16□□□□□ -0.62
NR1H3-220ENST00000481020 K7EMI3 77 aa11.16□□□□□ -0.62
NR1H3-220ENST00000481020 PRSS57Q6UWY2 283 aa11.16□□□□□ -0.62
NR1H3-220ENST00000481020 IL17RELQ6ZVW7 336 aa11.16□□□□□ -0.62
NR1H3-220ENST00000481020 ZNF502Q8TBZ5 544 aa11.16□□□□□ -0.62
NR1H3-220ENST00000481020 MYOZ3Q8TDC0 251 aa11.16□□□□□ -0.62
NR1H3-220ENST00000481020 HIF1ANQ9NWT6 349 aa11.16□□□□□ -0.62
NR1H3-220ENST00000481020 IGKV2-40A0A087WW87 121 aaPredicted RBP11.15□□□□□ -0.62
NR1H3-220ENST00000481020 TRAV12-1A0A0B4J245 112 aa11.15□□□□□ -0.62
NR1H3-220ENST00000481020 OOSP1A8MZH6 123 aa11.15□□□□□ -0.62
NR1H3-220ENST00000481020 IGKV2D-40P01614 121 aaPredicted RBP11.15□□□□□ -0.62
NR1H3-220ENST00000481020 RPL24P83731 157 aaKnown RBP11.15□□□□□ -0.62
NR1H3-220ENST00000481020 LY6G5BQ8NDX9 201 aa11.15□□□□□ -0.62
NR1H3-220ENST00000481020 MRPL53Q96EL3 112 aaKnown RBP11.15□□□□□ -0.62
NR1H3-220ENST00000481020 FANCD2OSQ96PS1 177 aa11.15□□□□□ -0.62
NR1H3-220ENST00000481020 SPATA25Q9BR10 227 aa11.15□□□□□ -0.62
NR1H3-220ENST00000481020 KNTC1P50748 2209 aa11.15□□□□□ -0.62
NR1H3-220ENST00000481020 IGLV2-18A0A075B6J9 118 aa11.15□□□□□ -0.63
NR1H3-220ENST00000481020 IGHV4-4A0A075B6R2 117 aa11.15□□□□□ -0.63
NR1H3-220ENST00000481020 A0A0G2JNJ9 132 aa11.15□□□□□ -0.63
NR1H3-220ENST00000481020 TEX48A0A1B0GUV7 120 aa11.15□□□□□ -0.63
NR1H3-220ENST00000481020 A0A1B0GWB2 263 aa11.15□□□□□ -0.63
NR1H3-220ENST00000481020 A0A1W2PRD5 423 aa11.15□□□□□ -0.63
NR1H3-220ENST00000481020 A0A1W2PRF3 423 aa11.15□□□□□ -0.63
NR1H3-220ENST00000481020 A0A1W2PRM7 423 aa11.15□□□□□ -0.63
NR1H3-220ENST00000481020 TIMM23O14925 209 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms