RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 H3BT86 120 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 K7N7A8 449 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 M0R378 163 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 M0R381 172 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 ZNF73O43830 326 aaPredicted RBP1.76□□□□□ -2.13
XRN1-211ENST00000477237 SSSCA1O60232 199 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 NUPR1O60356 82 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 CREBL2O60519 120 aaPredicted RBP1.76□□□□□ -2.13
XRN1-211ENST00000477237 ZNF253O75346 499 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 TCL1BO95988 128 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 TRBV12-3P01733 135 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 TCRAP04437 139 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 CD70P32970 193 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 MPV17LQ2QL34 196 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 LINC00303Q3SY05 128 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 NMSQ5H8A3 153 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 FAM78AQ5JUQ0 283 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 LINC00242Q5T6M2 205 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 HES3Q5TGS1 186 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 LINC01545Q5VT33 79 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 ZNF322Q6U7Q0 402 aaPredicted RBP1.76□□□□□ -2.13
XRN1-211ENST00000477237 LCA10Q71F78 164 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 LINC00596Q86U02 117 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 BPIFA4PQ86YQ2 179 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 SBSPONQ8IVN8 264 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 SIGLECL1Q8N7X8 197 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 TMEM75Q8N9X5 138 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 C15orf53Q8NAA6 179 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 OR10G2Q8NGC3 310 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 OR5H2Q8NGV7 314 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 MRPL30Q8TCC3 161 aaKnown RBP1.76□□□□□ -2.13
XRN1-211ENST00000477237 GTSF1Q8WW33 167 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 LINC01600Q96MT4 127 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 FAM218AQ96MZ4 157 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 UPK3BQ9BT76 320 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 POLR2J2Q9GZM3 115 aaKnown RBP1.76□□□□□ -2.13
XRN1-211ENST00000477237 PLEKHF2Q9H8W4 249 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 CYTL1Q9NRR1 136 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 CALYQ9NYX4 217 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 TP73-AS1Q9UF72 201 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 LSM2Q9Y333 95 aaKnown RBP1.76□□□□□ -2.13
XRN1-211ENST00000477237 HES2Q9Y543 173 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 MAST2Q6P0Q8 1798 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 LY75O60449 1722 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 PARP4Q9UKK3 1724 aaKnown RBP1.76□□□□□ -2.13
XRN1-211ENST00000477237 RREB1Q92766 1687 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 ERCC6L2Q5T890 1561 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 SCN2AQ99250 2005 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 CASP8AP2Q9UKL3 1982 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 SLIT2O94813 1529 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 COL1A1P02452 1464 aaPredicted RBP1.75□□□□□ -2.13
XRN1-211ENST00000477237 C3P01024 1663 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 TRAV1-1A0A0B4J248 108 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 A0A0D9SFI3 127 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 A0A0G2JRQ6 117 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 FAM168BA1KXE4 195 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 NAP1L6A6NFF2 107 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 DPRXA6NFQ7 191 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 EPOPA6NHQ4 379 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 C4orf51C9J302 202 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 E9PLD3 99 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 INS-IGF2F8WCM5 200 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 K7EM74 188 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 UPK2O00526 184 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 GNGT2O14610 69 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 SYNGR2O43760 224 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 IGHV3-7P01780 117 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 RBMY1CP0DJD4 496 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 CXCL5P42830 114 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 SSR2P43308 183 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 CCL23P55773 120 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 MP68P56378 58 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 LINC00313P59037 77 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 KRTAP10-10P60014 251 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 NPC2P61916 151 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 SNRPD3P62318 126 aaKnown RBP1.75□□□□□ -2.13
XRN1-211ENST00000477237 HIST1H4AP62805 103 aaKnown RBP1.75□□□□□ -2.13
XRN1-211ENST00000477237 FBXL19-AS1Q494R0 122 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 ABCA11PQ4W5N1 156 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 CLLU1OSQ5K130 101 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 CFAP126Q5VTH2 177 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 CLEC19AQ6UXS0 136 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 Q6ZQT7 251 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 C2orf91Q6ZV80 131 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 SMIM5Q71RC9 77 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 PHF5AQ7RTV0 110 aaKnown RBP1.75□□□□□ -2.13
XRN1-211ENST00000477237 Q8N2B8 174 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 ZNF555Q8NEP9 628 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 COPS9Q8WXC6 57 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 TOMM6Q96B49 74 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 RBMXL1Q96E39 390 aaKnown RBP1.75□□□□□ -2.13
XRN1-211ENST00000477237 TVP23CQ96ET8 276 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 KCNS1Q96KK3 526 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 C2orf50Q96LR7 162 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 RNF126Q9BV68 326 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 EIF5A2Q9GZV4 153 aaKnown RBP1.75□□□□□ -2.13
XRN1-211ENST00000477237 GABARAPL1Q9H0R8 117 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 SLC39A9Q9NUM3 307 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 LINC00527Q9UJ94 153 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 ZNF835Q9Y2P0 537 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms