RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 CCDC28AQ8IWP9 274 aa7.61□□□□□ -1.19
CASC3-204ENST00000474190 ZNF680Q8NEM1 530 aa7.61□□□□□ -1.19
CASC3-204ENST00000474190 LINC00052Q96N35 136 aa7.61□□□□□ -1.19
CASC3-204ENST00000474190 SLC50A1Q9BRV3 221 aa7.61□□□□□ -1.19
CASC3-204ENST00000474190 SAV1Q9H4B6 383 aaPredicted RBP7.61□□□□□ -1.19
CASC3-204ENST00000474190 SRD5A3Q9H8P0 318 aa7.61□□□□□ -1.19
CASC3-204ENST00000474190 ZMAT5Q9UDW3 170 aaKnown RBP7.61□□□□□ -1.19
CASC3-204ENST00000474190 FRMD6-AS1P0C7T7 363 aa7.6□□□□□ -1.19
CASC3-204ENST00000474190 HLA-DRB4P13762 266 aa7.6□□□□□ -1.19
CASC3-204ENST00000474190 RAB5CP51148 216 aa7.6□□□□□ -1.19
CASC3-204ENST00000474190 RANP62826 216 aaKnown RBP7.6□□□□□ -1.19
CASC3-204ENST00000474190 FOXI2Q6ZQN5 318 aa7.6□□□□□ -1.19
CASC3-204ENST00000474190 SFT2D1Q8WV19 159 aa7.6□□□□□ -1.19
CASC3-204ENST00000474190 MRPL53Q96EL3 112 aaKnown RBP7.6□□□□□ -1.19
CASC3-204ENST00000474190 Q9H3A6 140 aa7.6□□□□□ -1.19
CASC3-204ENST00000474190 HLA-DRB4X5D2U9 266 aa7.6□□□□□ -1.19
CASC3-204ENST00000474190 FAM74A7A6NL05 159 aa7.59□□□□□ -1.19
CASC3-204ENST00000474190 H2AFB1P0C5Y9 115 aa7.59□□□□□ -1.19
CASC3-204ENST00000474190 C4BPBP20851 252 aa7.59□□□□□ -1.19
CASC3-204ENST00000474190 ID1P41134 155 aa7.59□□□□□ -1.19
CASC3-204ENST00000474190 SNRPD3P62318 126 aaKnown RBP7.59□□□□□ -1.19
CASC3-204ENST00000474190 PMS2P11Q13670 270 aa7.59□□□□□ -1.19
CASC3-204ENST00000474190 ICAM4Q14773 271 aa7.59□□□□□ -1.19
CASC3-204ENST00000474190 ACTL10Q5JWF8 245 aa7.59□□□□□ -1.19
CASC3-204ENST00000474190 SAMD13Q5VXD3 122 aa7.59□□□□□ -1.19
CASC3-204ENST00000474190 SBSPONQ8IVN8 264 aa7.59□□□□□ -1.19
CASC3-204ENST00000474190 LYPD1Q8N2G4 141 aa7.59□□□□□ -1.19
CASC3-204ENST00000474190 OR8A1Q8NGG7 326 aa7.59□□□□□ -1.19
CASC3-204ENST00000474190 RPUSD4Q96CM3 377 aaKnown RBP7.59□□□□□ -1.19
CASC3-204ENST00000474190 FAM19A4Q96LR4 140 aa7.59□□□□□ -1.19
CASC3-204ENST00000474190 CLUHP3Q96NS8 147 aa7.59□□□□□ -1.19
CASC3-204ENST00000474190 AGRNO00468 2067 aa7.58□□□□□ -1.2
CASC3-204ENST00000474190 A0A1B0GV50 99 aa7.58□□□□□ -1.2
CASC3-204ENST00000474190 NPIPB6E9PJ23 425 aa7.58□□□□□ -1.2
CASC3-204ENST00000474190 IGLV2-11P01706 119 aa7.58□□□□□ -1.2
CASC3-204ENST00000474190 CNN1P51911 297 aaKnown RBP7.58□□□□□ -1.2
CASC3-204ENST00000474190 CMC4P56277 68 aaPredicted RBP7.58□□□□□ -1.2
CASC3-204ENST00000474190 GNG5P63218 68 aa7.58□□□□□ -1.2
CASC3-204ENST00000474190 KIR3DS1Q14943 382 aa7.58□□□□□ -1.2
CASC3-204ENST00000474190 HAGHQ16775 308 aa7.58□□□□□ -1.2
CASC3-204ENST00000474190 EIF5AL1Q6IS14 154 aaKnown RBP7.58□□□□□ -1.2
CASC3-204ENST00000474190 CSNK1G2-AS1Q8NCQ2 148 aa7.58□□□□□ -1.2
CASC3-204ENST00000474190 PCNPQ8WW12 178 aaKnown RBP7.58□□□□□ -1.2
CASC3-204ENST00000474190 VGLL1Q99990 258 aa7.58□□□□□ -1.2
CASC3-204ENST00000474190 OTORQ9NRC9 128 aa7.58□□□□□ -1.2
CASC3-204ENST00000474190 TMEM167BQ9NRX6 74 aa7.58□□□□□ -1.2
CASC3-204ENST00000474190 IGKV2-40A0A087WW87 121 aaPredicted RBP7.57□□□□□ -1.2
CASC3-204ENST00000474190 A0A1W2PRE2 83 aa7.57□□□□□ -1.2
CASC3-204ENST00000474190 PGPA6NDG6 321 aa7.57□□□□□ -1.2
CASC3-204ENST00000474190 ZNF705EA8MWA4 302 aaPredicted RBP7.57□□□□□ -1.2
CASC3-204ENST00000474190 DIRC3C9JPN6 131 aa7.57□□□□□ -1.2
CASC3-204ENST00000474190 CRXO43186 299 aaPredicted RBP7.57□□□□□ -1.2
CASC3-204ENST00000474190 IGKV2D-40P01614 121 aaPredicted RBP7.57□□□□□ -1.2
CASC3-204ENST00000474190 NMBP08949 121 aa7.57□□□□□ -1.2
CASC3-204ENST00000474190 CT45A10P0DMU9 189 aa7.57□□□□□ -1.2
CASC3-204ENST00000474190 RPL35AP18077 110 aaKnown RBP7.57□□□□□ -1.2
CASC3-204ENST00000474190 PSG9Q00887 426 aa7.57□□□□□ -1.2
CASC3-204ENST00000474190 ERCC8Q13216 396 aa7.57□□□□□ -1.2
CASC3-204ENST00000474190 ZNF738Q8NE65 137 aa7.57□□□□□ -1.2
CASC3-204ENST00000474190 MRAPQ8TCY5 172 aa7.57□□□□□ -1.2
CASC3-204ENST00000474190 TVP23CQ96ET8 276 aa7.57□□□□□ -1.2
CASC3-204ENST00000474190 AGPAT4-IT1Q9H0P7 198 aa7.57□□□□□ -1.2
CASC3-204ENST00000474190 DYNC2H1Q8NCM8 4307 aaKnown RBP7.56□□□□□ -1.2
CASC3-204ENST00000474190 PAGE4O60829 102 aa7.56□□□□□ -1.2
CASC3-204ENST00000474190 RBMY1A1P0DJD3 496 aaKnown RBP7.56□□□□□ -1.2
CASC3-204ENST00000474190 RBMY1CP0DJD4 496 aa7.56□□□□□ -1.2
CASC3-204ENST00000474190 ATP5G3P48201 142 aa7.56□□□□□ -1.2
CASC3-204ENST00000474190 UBE2G2P60604 165 aa7.56□□□□□ -1.2
CASC3-204ENST00000474190 SUMO1P63165 101 aaKnown RBP7.56□□□□□ -1.2
CASC3-204ENST00000474190 RBMY1FQ15415 496 aaKnown RBP7.56□□□□□ -1.2
CASC3-204ENST00000474190 C9orf47Q6ZRZ4 202 aa7.56□□□□□ -1.2
CASC3-204ENST00000474190 ARL6IP6Q8N6S5 226 aa7.56□□□□□ -1.2
CASC3-204ENST00000474190 ASCL2Q99929 193 aa7.56□□□□□ -1.2
CASC3-204ENST00000474190 SLC35B3Q9H1N7 401 aa7.56□□□□□ -1.2
CASC3-204ENST00000474190 CLEC5AQ9NY25 188 aa7.56□□□□□ -1.2
CASC3-204ENST00000474190 PRELID1Q9Y255 219 aa7.56□□□□□ -1.2
CASC3-204ENST00000474190 ARL2-SNX15V9GYD0 113 aa7.56□□□□□ -1.2
CASC3-204ENST00000474190 RYR2Q92736 4967 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 LOC102724200A0A096LPH7 203 aaPredicted RBP7.55□□□□□ -1.2
CASC3-204ENST00000474190 TRAV8-1A0A0A6YYK1 113 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 KIR2DL5BA0A0G2JN68 375 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 KIR2DL5BA0A0G2JPC4 375 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 IGKV3-20P01619 116 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 TCRAP04437 139 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 HIST1H1AQ02539 215 aaPredicted RBP7.55□□□□□ -1.2
CASC3-204ENST00000474190 PRR9Q5T870 116 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 KIR2DL5AQ8N109 375 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 ZFAND2AQ8N6M9 145 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 KIR2DL5BQ8NHK3 375 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 LRRC20Q8TCA0 184 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 LINC00479Q96M42 142 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 B9D2Q9BPU9 175 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 TM2D3Q9BRN9 247 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 PPP1R14DQ9NXH3 145 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 EPDR1Q9UM22 224 aa7.55□□□□□ -1.2
CASC3-204ENST00000474190 RBAKDNA6NC62 111 aa7.54□□□□□ -1.2
CASC3-204ENST00000474190 DEFB121Q5J5C9 76 aa7.54□□□□□ -1.2
CASC3-204ENST00000474190 Q6ZQT7 251 aa7.54□□□□□ -1.2
CASC3-204ENST00000474190 C5orf17Q8NAS9 161 aa7.54□□□□□ -1.2
CASC3-204ENST00000474190 C2CD4CQ8TF44 421 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms