RNA–Protein interactions for RNA: ENST00000471308.5

PCBP4-208, Transcript of poly(rC) binding protein 4, human

TSL 2

Gene PCBP4, Length 2,087 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCBP4-208	ENST00000471308	SMAD5-AS1	Q9Y6J3	95 aa		13.15	□□□□□ -0.3
PCBP4-208	ENST00000471308	NCOR2	Q9Y618	2525 aa		13.15	□□□□□ -0.3
PCBP4-208	ENST00000471308	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.14	□□□□□ -0.31
PCBP4-208	ENST00000471308	TRBV7-1	A0A0A6YYK4	115 aa		13.14	□□□□□ -0.31
PCBP4-208	ENST00000471308	IGKV2D-40	P01614	121 aa	Predicted RBP	13.14	□□□□□ -0.31
PCBP4-208	ENST00000471308	CLEC3B	P05452	202 aa		13.14	□□□□□ -0.31
PCBP4-208	ENST00000471308	PRR25	Q96S07	402 aa		13.14	□□□□□ -0.31
PCBP4-208	ENST00000471308	ASCL2	Q99929	193 aa		13.14	□□□□□ -0.31
PCBP4-208	ENST00000471308	TMEM189	A5PLL7	270 aa		13.14	□□□□□ -0.31
PCBP4-208	ENST00000471308	SH2D1A	O60880	128 aa		13.14	□□□□□ -0.31
PCBP4-208	ENST00000471308	LINC00614	P0C842	121 aa		13.14	□□□□□ -0.31
PCBP4-208	ENST00000471308	CCDC140	Q96MF4	163 aa		13.14	□□□□□ -0.31
PCBP4-208	ENST00000471308	C2orf70	A6NJV1	201 aa		13.13	□□□□□ -0.31
PCBP4-208	ENST00000471308	NDUFS8	O00217	210 aa		13.13	□□□□□ -0.31
PCBP4-208	ENST00000471308	RPS20	P60866	119 aa	Known RBP	13.13	□□□□□ -0.31
PCBP4-208	ENST00000471308	ZNF493	Q6ZR52	646 aa		13.13	□□□□□ -0.31
PCBP4-208	ENST00000471308	KLHDC1	Q8N7A1	406 aa		13.13	□□□□□ -0.31
PCBP4-208	ENST00000471308	SLC50A1	Q9BRV3	221 aa		13.13	□□□□□ -0.31
PCBP4-208	ENST00000471308	IGHV1-69D	A0A0B4J2H0	117 aa		13.12	□□□□□ -0.31
PCBP4-208	ENST00000471308		G3V318	75 aa		13.12	□□□□□ -0.31
PCBP4-208	ENST00000471308	BUB3	O43684	328 aa		13.12	□□□□□ -0.31
PCBP4-208	ENST00000471308	IGHV1-69	P01742	117 aa		13.12	□□□□□ -0.31
PCBP4-208	ENST00000471308	BMI1	P35226	326 aa		13.12	□□□□□ -0.31
PCBP4-208	ENST00000471308	EBLN2	Q6P2I7	272 aa		13.12	□□□□□ -0.31
PCBP4-208	ENST00000471308	CCL19	Q99731	98 aa		13.12	□□□□□ -0.31
PCBP4-208	ENST00000471308	IGHV1-24	A0A0C4DH33	117 aa		13.12	□□□□□ -0.31
PCBP4-208	ENST00000471308	OR5AL1	P0C617	328 aa		13.12	□□□□□ -0.31
PCBP4-208	ENST00000471308	CRIP2	P52943	208 aa	Predicted RBP	13.12	□□□□□ -0.31
PCBP4-208	ENST00000471308	PRR31	Q5SQ13	230 aa		13.12	□□□□□ -0.31
PCBP4-208	ENST00000471308	TMEM70	Q9BUB7	260 aa		13.12	□□□□□ -0.31
PCBP4-208	ENST00000471308	C20orf202	A1L168	122 aa		13.11	□□□□□ -0.31
PCBP4-208	ENST00000471308	DLEU1	O43261	78 aa		13.11	□□□□□ -0.31
PCBP4-208	ENST00000471308	IGHG4	P01861	327 aa		13.11	□□□□□ -0.31
PCBP4-208	ENST00000471308	CLEC19A	Q6UXS0	136 aa		13.11	□□□□□ -0.31
PCBP4-208	ENST00000471308	IGHV3-35	A0A0C4DH35	117 aa		13.11	□□□□□ -0.31
PCBP4-208	ENST00000471308	RBAKDN	A6NC62	111 aa		13.11	□□□□□ -0.31
PCBP4-208	ENST00000471308	FAM223B	A6NKX1	122 aa		13.11	□□□□□ -0.31
PCBP4-208	ENST00000471308	SRSF2	Q01130	221 aa	Known RBP	13.11	□□□□□ -0.31
PCBP4-208	ENST00000471308	FAM223A	Q8IWN6	122 aa		13.11	□□□□□ -0.31
PCBP4-208	ENST00000471308	UQCR10	Q9UDW1	63 aa		13.11	□□□□□ -0.31
PCBP4-208	ENST00000471308	TMEM8B	A6NDV4	472 aa		13.1	□□□□□ -0.31
PCBP4-208	ENST00000471308	CRX	O43186	299 aa	Predicted RBP	13.1	□□□□□ -0.31
PCBP4-208	ENST00000471308	RPLP1	P05386	114 aa	Known RBP	13.1	□□□□□ -0.31
PCBP4-208	ENST00000471308	PRB4	P10163	310 aa	Predicted RBP	13.1	□□□□□ -0.31
PCBP4-208	ENST00000471308	LCN12	Q6JVE5	192 aa		13.1	□□□□□ -0.31
PCBP4-208	ENST00000471308	C10orf105	Q8TEF2	133 aa		13.1	□□□□□ -0.31
PCBP4-208	ENST00000471308	TPPP3	Q9BW30	176 aa		13.1	□□□□□ -0.31
PCBP4-208	ENST00000471308	IGHV3OR16-8	A0A075B7F1	116 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	TRAV41	A0A0B4J266	112 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	CLPSL1	A2RUU4	121 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	LINC01548	A6NM66	108 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308		M0QZ24	198 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	LEPROTL1	O95214	131 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	ZNF25	P17030	456 aa	Predicted RBP	13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	ATP5G2	Q06055	141 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	LYZL1	Q6UWQ5	148 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	METTL26	Q96S19	204 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	VGLL1	Q99990	258 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	MEGF9	Q9H1U4	602 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	TRAV40	A0A0B4J280	105 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	IGLC3	P0DOY3	106 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	C19orf54	Q5BKX5	351 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	CLEC2A	Q6UVW9	174 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	TMEM208	Q9BTX3	173 aa		13.09	□□□□□ -0.31
PCBP4-208	ENST00000471308	TRAV9-2	A0A087WT02	112 aa		13.08	□□□□□ -0.32
PCBP4-208	ENST00000471308	IGHV4-61	A0A0C4DH41	118 aa		13.08	□□□□□ -0.32
PCBP4-208	ENST00000471308	TMEM219	Q86XT9	240 aa		13.08	□□□□□ -0.32
PCBP4-208	ENST00000471308		Q8TAT8	98 aa		13.08	□□□□□ -0.32
PCBP4-208	ENST00000471308	CLEC5A	Q9NY25	188 aa		13.08	□□□□□ -0.32
PCBP4-208	ENST00000471308	GOLT1B	Q9Y3E0	138 aa		13.08	□□□□□ -0.32
PCBP4-208	ENST00000471308	MED13L	Q71F56	2210 aa		13.08	□□□□□ -0.32
PCBP4-208	ENST00000471308	G0S2	P27469	103 aa		13.08	□□□□□ -0.32
PCBP4-208	ENST00000471308	HLA-DMB	P28068	263 aa		13.08	□□□□□ -0.32
PCBP4-208	ENST00000471308	MRPL53	Q96EL3	112 aa	Known RBP	13.08	□□□□□ -0.32
PCBP4-208	ENST00000471308	ASH1L	Q9NR48	2969 aa	Known RBP	13.07	□□□□□ -0.32
PCBP4-208	ENST00000471308	ABCA2	Q9BZC7	2435 aa		13.07	□□□□□ -0.32
PCBP4-208	ENST00000471308	IGFL4	Q6B9Z1	124 aa		13.07	□□□□□ -0.32
PCBP4-208	ENST00000471308	PIFO	Q8TCI5	191 aa		13.07	□□□□□ -0.32
PCBP4-208	ENST00000471308	TMSB15B	A0A087X1C1	80 aa		13.06	□□□□□ -0.32
PCBP4-208	ENST00000471308	AP5S1	Q9NUS5	200 aa		13.06	□□□□□ -0.32
PCBP4-208	ENST00000471308	HSPB8	Q9UJY1	196 aa		13.06	□□□□□ -0.32
PCBP4-208	ENST00000471308	CBY1	Q9Y3M2	126 aa		13.06	□□□□□ -0.32
PCBP4-208	ENST00000471308	IGHV3OR16-10	A0A075B7F0	116 aa		13.06	□□□□□ -0.32
PCBP4-208	ENST00000471308	SYS1-DBNDD2	H3BUS1	97 aa		13.06	□□□□□ -0.32
PCBP4-208	ENST00000471308	FAM104B	Q5XKR9	115 aa		13.06	□□□□□ -0.32
PCBP4-208	ENST00000471308	ATOH7	Q8N100	152 aa		13.06	□□□□□ -0.32
PCBP4-208	ENST00000471308	FER1L6-AS1	Q8NA97	138 aa		13.06	□□□□□ -0.32
PCBP4-208	ENST00000471308		U3KQE9	123 aa		13.06	□□□□□ -0.32
PCBP4-208	ENST00000471308	FABP5P3	A8MUU1	101 aa		13.05	□□□□□ -0.32
PCBP4-208	ENST00000471308	IGLC6	P0CF74	106 aa		13.05	□□□□□ -0.32
PCBP4-208	ENST00000471308	ZNF80	P51504	273 aa	Predicted RBP	13.05	□□□□□ -0.32
PCBP4-208	ENST00000471308	BRD3OS	Q6XYD6	125 aa		13.05	□□□□□ -0.32
PCBP4-208	ENST00000471308		U3KQK5	164 aa		13.05	□□□□□ -0.32
PCBP4-208	ENST00000471308	CSMD1	Q96PZ7	3565 aa		13.05	□□□□□ -0.32
PCBP4-208	ENST00000471308	IGF1	P05019	195 aa		13.04	□□□□□ -0.32
PCBP4-208	ENST00000471308	ATP5J2	P56134	94 aa		13.04	□□□□□ -0.32
PCBP4-208	ENST00000471308	FA2H	Q7L5A8	372 aa		13.04	□□□□□ -0.32
PCBP4-208	ENST00000471308	MAP1LC3C	Q9BXW4	147 aa		13.04	□□□□□ -0.32
PCBP4-208	ENST00000471308	HIF1AN	Q9NWT6	349 aa		13.04	□□□□□ -0.32

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