RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 DEDD2Q8WXF8 326 aa14.22□□□□□ -0.13
CPSF7-209ENST00000463244 PTTG2Q9NZH5 202 aa14.22□□□□□ -0.13
CPSF7-209ENST00000463244 TRAV12-3A0A0B4J271 114 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 LINC00854A0A1B0GVQ3 168 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 H3BTX0 84 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 J3KRW8 73 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 SIVA1O15304 175 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 CT45A10P0DMU9 189 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 UBE2MP61081 183 aaKnown RBP14.21□□□□□ -0.13
CPSF7-209ENST00000463244 C4orf46Q504U0 113 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 PYDC2Q56P42 97 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 CDPF1Q6NVV7 123 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 ZNF546Q86UE3 836 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 ZNF431Q8TF32 576 aaPredicted RBP14.21□□□□□ -0.13
CPSF7-209ENST00000463244 C18orf15Q96N68 181 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 ODF3Q96PU9 254 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 PYGO2Q9BRQ0 406 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 MGAT4CQ9UBM8 478 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 PXMP4Q9Y6I8 212 aa14.21□□□□□ -0.13
CPSF7-209ENST00000463244 GOSR2O14653 212 aa14.2□□□□□ -0.14
CPSF7-209ENST00000463244 IGLC2P0DOY2 106 aa14.2□□□□□ -0.14
CPSF7-209ENST00000463244 FUSP35637 526 aaKnown RBP eCLIP14.2□□□□□ -0.14
CPSF7-209ENST00000463244 OR10P1Q8NGE3 313 aa14.2□□□□□ -0.14
CPSF7-209ENST00000463244 SAT2Q96F10 170 aaPredicted RBP14.2□□□□□ -0.14
CPSF7-209ENST00000463244 C9orf170A2RU37 121 aa14.19□□□□□ -0.14
CPSF7-209ENST00000463244 EREGO14944 169 aa14.19□□□□□ -0.14
CPSF7-209ENST00000463244 AGPAT2O15120 278 aa14.19□□□□□ -0.14
CPSF7-209ENST00000463244 LEPP41159 167 aa14.19□□□□□ -0.14
CPSF7-209ENST00000463244 ERVFC1-1P60608 527 aa14.19□□□□□ -0.14
CPSF7-209ENST00000463244 MORN5Q5VZ52 161 aa14.19□□□□□ -0.14
CPSF7-209ENST00000463244 TMEM37Q8WXS4 190 aa14.19□□□□□ -0.14
CPSF7-209ENST00000463244 V9GYH0 126 aa14.19□□□□□ -0.14
CPSF7-209ENST00000463244 TRGV2A0A075B6R0 118 aa14.18□□□□□ -0.14
CPSF7-209ENST00000463244 NPIPB6E9PJ23 425 aa14.18□□□□□ -0.14
CPSF7-209ENST00000463244 COX7A2P2O60397 106 aa14.18□□□□□ -0.14
CPSF7-209ENST00000463244 OPCMLQ14982 345 aa14.18□□□□□ -0.14
CPSF7-209ENST00000463244 Q5VSD8 79 aa14.18□□□□□ -0.14
CPSF7-209ENST00000463244 C11orf72Q8NBR9 251 aa14.18□□□□□ -0.14
CPSF7-209ENST00000463244 H3BMQ9 156 aa14.17□□□□□ -0.14
CPSF7-209ENST00000463244 H3BQ15 152 aa14.17□□□□□ -0.14
CPSF7-209ENST00000463244 ZNF680Q8NEM1 530 aa14.17□□□□□ -0.14
CPSF7-209ENST00000463244 GSN-AS1Q9NRJ2 163 aa14.17□□□□□ -0.14
CPSF7-209ENST00000463244 TSC22D2O75157 780 aa14.16□□□□□ -0.14
CPSF7-209ENST00000463244 NXPH4O95158 308 aa14.16□□□□□ -0.14
CPSF7-209ENST00000463244 ARL16Q0P5N6 197 aa14.16□□□□□ -0.14
CPSF7-209ENST00000463244 MGST2Q99735 147 aa14.16□□□□□ -0.14
CPSF7-209ENST00000463244 GGACTQ9BVM4 153 aa14.16□□□□□ -0.14
CPSF7-209ENST00000463244 TRGV1A0A0A0MS02 117 aa14.15□□□□□ -0.14
CPSF7-209ENST00000463244 TAS2R30P59541 319 aa14.15□□□□□ -0.14
CPSF7-209ENST00000463244 C10orf113Q5VZT2 155 aa14.15□□□□□ -0.14
CPSF7-209ENST00000463244 FRZBQ92765 325 aa14.15□□□□□ -0.14
CPSF7-209ENST00000463244 FUT9Q9Y231 359 aa14.15□□□□□ -0.14
CPSF7-209ENST00000463244 TNFRSF18Q9Y5U5 241 aa14.15□□□□□ -0.14
CPSF7-209ENST00000463244 SCGB1D2O95969 90 aa14.14□□□□□ -0.15
CPSF7-209ENST00000463244 SLC25A5P05141 298 aaKnown RBP14.14□□□□□ -0.15
CPSF7-209ENST00000463244 GUK1Q16774 197 aa14.14□□□□□ -0.15
CPSF7-209ENST00000463244 RCL1Q9Y2P8 373 aaKnown RBP14.14□□□□□ -0.15
CPSF7-209ENST00000463244 ICOSQ9Y6W8 199 aa14.14□□□□□ -0.15
CPSF7-209ENST00000463244 C7orf71A4D174 169 aa14.13□□□□□ -0.15
CPSF7-209ENST00000463244 ZNF324O75467 553 aaPredicted RBP14.13□□□□□ -0.15
CPSF7-209ENST00000463244 KRTAP10-1P60331 282 aa14.13□□□□□ -0.15
CPSF7-209ENST00000463244 ANXA2RQ3ZCQ2 193 aa14.13□□□□□ -0.15
CPSF7-209ENST00000463244 NFE4Q86UQ8 179 aa14.13□□□□□ -0.15
CPSF7-209ENST00000463244 LINC00467Q9BRT7 94 aa14.13□□□□□ -0.15
CPSF7-209ENST00000463244 A0A087WTM6 91 aa14.12□□□□□ -0.15
CPSF7-209ENST00000463244 KLLNB2CW77 178 aa14.12□□□□□ -0.15
CPSF7-209ENST00000463244 PAX4O43316 350 aa14.12□□□□□ -0.15
CPSF7-209ENST00000463244 SPINK4O60575 86 aa14.12□□□□□ -0.15
CPSF7-209ENST00000463244 NOL3O60936 208 aaKnown RBP14.12□□□□□ -0.15
CPSF7-209ENST00000463244 DNAH10OSP0CZ25 163 aa14.12□□□□□ -0.15
CPSF7-209ENST00000463244 IAH1Q2TAA2 248 aaPredicted RBP14.12□□□□□ -0.15
CPSF7-209ENST00000463244 EIF4E3Q8N5X7 224 aaKnown RBP14.12□□□□□ -0.15
CPSF7-209ENST00000463244 ST6GAL2Q96JF0 529 aa14.12□□□□□ -0.15
CPSF7-209ENST00000463244 DNAJC4Q9NNZ3 241 aa14.12□□□□□ -0.15
CPSF7-209ENST00000463244 TRAV5A0A0B4J249 113 aa14.11□□□□□ -0.15
CPSF7-209ENST00000463244 C7orf66A4D0T2 115 aa14.11□□□□□ -0.15
CPSF7-209ENST00000463244 ZNF253O75346 499 aa14.11□□□□□ -0.15
CPSF7-209ENST00000463244 NDUFB6O95139 128 aa14.11□□□□□ -0.15
CPSF7-209ENST00000463244 IFNA5P01569 189 aa14.11□□□□□ -0.15
CPSF7-209ENST00000463244 OR4E1P0C645 316 aa14.11□□□□□ -0.15
CPSF7-209ENST00000463244 TCL1AP56279 114 aa14.11□□□□□ -0.15
CPSF7-209ENST00000463244 MRPL53Q96EL3 112 aaKnown RBP14.11□□□□□ -0.15
CPSF7-209ENST00000463244 FLVCR2Q9UPI3 526 aa14.11□□□□□ -0.15
CPSF7-209ENST00000463244 KLF12Q9Y4X4 402 aa14.11□□□□□ -0.15
CPSF7-209ENST00000463244 CAMLGP49069 296 aa14.1□□□□□ -0.15
CPSF7-209ENST00000463244 CD300CQ08708 224 aa14.1□□□□□ -0.15
CPSF7-209ENST00000463244 BTN1A1Q13410 526 aa14.1□□□□□ -0.15
CPSF7-209ENST00000463244 Q6ZRG5 221 aa14.1□□□□□ -0.15
CPSF7-209ENST00000463244 FAM19A4Q96LR4 140 aa14.1□□□□□ -0.15
CPSF7-209ENST00000463244 DNAH8Q96JB1 4490 aa14.09□□□□□ -0.15
CPSF7-209ENST00000463244 M0R3E3 92 aa14.09□□□□□ -0.15
CPSF7-209ENST00000463244 ERCC8Q13216 396 aa14.09□□□□□ -0.15
CPSF7-209ENST00000463244 MIC13Q5XKP0 118 aa14.09□□□□□ -0.15
CPSF7-209ENST00000463244 LYPD5Q6UWN5 251 aa14.09□□□□□ -0.15
CPSF7-209ENST00000463244 GSKIPQ9P0R6 139 aa14.09□□□□□ -0.15
CPSF7-209ENST00000463244 PRO0255Q9UI72 69 aa14.09□□□□□ -0.15
CPSF7-209ENST00000463244 IGHV3-53P01767 116 aa14.08□□□□□ -0.16
CPSF7-209ENST00000463244 MBPP02686 304 aaPredicted RBP14.08□□□□□ -0.16
CPSF7-209ENST00000463244 ICAM4Q14773 271 aa14.08□□□□□ -0.16
CPSF7-209ENST00000463244 IBA57Q5T440 356 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms