RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ZNF292O60281 2723 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 RIF1Q5UIP0 2472 aaKnown RBP9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 TMEM189A5PLL7 270 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 GAGE10A6NGK3 116 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 K7EQM0 130 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 NPYP01303 97 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 IGHV3-23P01764 117 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 TM4SF20Q53R12 229 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 ARL6IP6Q8N6S5 226 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 SHISA9B4DS77 424 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 TIMM23O14925 209 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 CT45A10P0DMU9 189 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 BOD1L2Q8IYS8 172 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 MEGF9Q9H1U4 602 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 DKK2Q9UBU2 259 aa9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 RALYQ9UKM9 306 aaKnown RBP9.2□□□□□ -0.94
PDZRN3-203ENST00000462146 NMUP48645 174 aa9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 ZNF80P51504 273 aaPredicted RBP9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 RIPPLY3P57055 190 aa9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 SEC11AP67812 179 aa9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 PAX8Q06710 450 aa9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 KIR3DS1Q14943 382 aa9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 UFSP1Q6NVU6 142 aa9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 ORMDL3Q8N138 153 aa9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 C18orf15Q96N68 181 aa9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 U3KQK5 164 aa9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 EGR2P11161 476 aaPredicted RBP9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 HLA-DMBP28068 263 aa9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 LGALS9BQ3B8N2 356 aa9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 LGALS9CQ6DKI2 356 aa9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 MSRB1Q9NZV6 116 aa9.19□□□□□ -0.94
PDZRN3-203ENST00000462146 IGHV3OR16-8A0A075B7F1 116 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 A0A1B0GW15 77 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 SMAD7O15105 426 aaKnown RBP9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 GFRALQ6UXV0 394 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 TNFRSF14Q92956 283 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 TTTY13Q9BZ97 58 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 PPIAL4CA0A0B4J2A2 164 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 WI2-2373I1.2A0A1W2PRP0 233 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 C9orf118A6NHY6 69 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 HBDP02042 147 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 PPIAL4GP0DN37 164 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 Q6AWC8 147 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 ADAMTSL5Q6ZMM2 481 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 TWIST1Q15672 202 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 ZNF575Q86XF7 245 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 LYPD1Q8N2G4 141 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 IFI27L1Q96BM0 104 aa9.18□□□□□ -0.94
PDZRN3-203ENST00000462146 A1L4Q6 167 aa9.17□□□□□ -0.94
PDZRN3-203ENST00000462146 NPIPB5A8MRT5 1133 aa9.17□□□□□ -0.94
PDZRN3-203ENST00000462146 H3BRM9 83 aa9.17□□□□□ -0.94
PDZRN3-203ENST00000462146 GNG7O60262 68 aa9.17□□□□□ -0.94
PDZRN3-203ENST00000462146 CKS2P33552 79 aa9.17□□□□□ -0.94
PDZRN3-203ENST00000462146 FER1L6-AS1Q8NA97 138 aa9.17□□□□□ -0.94
PDZRN3-203ENST00000462146 VGLL1Q99990 258 aa9.17□□□□□ -0.94
PDZRN3-203ENST00000462146 AAMDCQ9H7C9 122 aa9.17□□□□□ -0.94
PDZRN3-203ENST00000462146 ONECUT1Q9UBC0 465 aa9.17□□□□□ -0.94
PDZRN3-203ENST00000462146 F8W735 103 aaPredicted RBP9.17□□□□□ -0.94
PDZRN3-203ENST00000462146 LY6LH3BQJ8 138 aa9.17□□□□□ -0.94
PDZRN3-203ENST00000462146 AP1S3Q96PC3 154 aa9.17□□□□□ -0.94
PDZRN3-203ENST00000462146 CSTL1Q9H114 145 aa9.17□□□□□ -0.94
PDZRN3-203ENST00000462146 A0A0G2JLM5 398 aa9.16□□□□□ -0.94
PDZRN3-203ENST00000462146 K7ERU9 68 aa9.16□□□□□ -0.94
PDZRN3-203ENST00000462146 PRRG2O14669 202 aa9.16□□□□□ -0.94
PDZRN3-203ENST00000462146 NDUFS7O75251 213 aa9.16□□□□□ -0.94
PDZRN3-203ENST00000462146 KLRD1Q13241 179 aa9.16□□□□□ -0.94
PDZRN3-203ENST00000462146 SMIM15Q7Z3B0 74 aa9.16□□□□□ -0.94
PDZRN3-203ENST00000462146 OR1N2Q8NGR9 330 aa9.16□□□□□ -0.94
PDZRN3-203ENST00000462146 ABHD17AQ96GS6 310 aa9.16□□□□□ -0.94
PDZRN3-203ENST00000462146 IGKV2D-26A0A0A0MRZ7 120 aa9.16□□□□□ -0.94
PDZRN3-203ENST00000462146 IGHV3-35A0A0C4DH35 117 aa9.16□□□□□ -0.94
PDZRN3-203ENST00000462146 LY6HO94772 140 aa9.16□□□□□ -0.94
PDZRN3-203ENST00000462146 DPF1Q92782 380 aa9.16□□□□□ -0.94
PDZRN3-203ENST00000462146 FANCD2OSQ96PS1 177 aa9.16□□□□□ -0.94
PDZRN3-203ENST00000462146 SPTBN2O15020 2390 aa9.15□□□□□ -0.94
PDZRN3-203ENST00000462146 A6NDN8 102 aa9.15□□□□□ -0.94
PDZRN3-203ENST00000462146 HSD52Q0P140 79 aa9.15□□□□□ -0.94
PDZRN3-203ENST00000462146 PRR25Q96S07 402 aa9.15□□□□□ -0.94
PDZRN3-203ENST00000462146 ABCA4P78363 2273 aa9.15□□□□□ -0.94
PDZRN3-203ENST00000462146 K7EP34 96 aa9.15□□□□□ -0.94
PDZRN3-203ENST00000462146 NBR2O15453 112 aa9.15□□□□□ -0.94
PDZRN3-203ENST00000462146 GATA1P15976 413 aaPredicted RBP9.15□□□□□ -0.94
PDZRN3-203ENST00000462146 EVI2AP22794 236 aa9.15□□□□□ -0.94
PDZRN3-203ENST00000462146 NDPQ00604 133 aa9.15□□□□□ -0.94
PDZRN3-203ENST00000462146 ASH1LQ9NR48 2969 aaKnown RBP9.15□□□□□ -0.94
PDZRN3-203ENST00000462146 K7EMI3 77 aa9.15□□□□□ -0.95
PDZRN3-203ENST00000462146 PPIFP30405 207 aaKnown RBP9.15□□□□□ -0.95
PDZRN3-203ENST00000462146 PRR30Q53SZ7 412 aaPredicted RBP9.15□□□□□ -0.95
PDZRN3-203ENST00000462146 RNF185Q96GF1 192 aa9.15□□□□□ -0.95
PDZRN3-203ENST00000462146 JKAMPQ9P055 326 aa9.15□□□□□ -0.95
PDZRN3-203ENST00000462146 IGHG4P01861 327 aa9.14□□□□□ -0.95
PDZRN3-203ENST00000462146 HES1Q14469 280 aa9.14□□□□□ -0.95
PDZRN3-203ENST00000462146 GTF2H5Q6ZYL4 71 aa9.14□□□□□ -0.95
PDZRN3-203ENST00000462146 SMAD5-AS1Q9Y6J3 95 aa9.14□□□□□ -0.95
PDZRN3-203ENST00000462146 OR9G4Q8NGQ1 327 aa9.14□□□□□ -0.95
PDZRN3-203ENST00000462146 OR2K2Q8NGT1 345 aa9.14□□□□□ -0.95
PDZRN3-203ENST00000462146 CFHR4Q92496 578 aa9.14□□□□□ -0.95
PDZRN3-203ENST00000462146 PTPRZ1P23471 2315 aaPredicted RBP9.13□□□□□ -0.95
PDZRN3-203ENST00000462146 ERCC8Q13216 396 aa9.13□□□□□ -0.95
PDZRN3-203ENST00000462146 PDE6HQ13956 83 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms