RNA–Protein interactions for RNA: ENST00000458659.2

TSC22D1-203, Transcript of TSC22 domain family member 1, humanhuman

TSL 1 (best) BASIC

Gene TSC22D1, Length 4,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-203ENST00000458659 IGKV3-20P01619 116 aa10.38□□□□□ -0.75
TSC22D1-203ENST00000458659 ERCC8Q13216 396 aa10.38□□□□□ -0.75
TSC22D1-203ENST00000458659 MDS2Q8NDY4 140 aa10.38□□□□□ -0.75
TSC22D1-203ENST00000458659 SLC25A15Q9Y619 301 aa10.38□□□□□ -0.75
TSC22D1-203ENST00000458659 TRAV26-2A0A0B4J265 109 aa10.37□□□□□ -0.75
TSC22D1-203ENST00000458659 RAB9AP51151 201 aa10.37□□□□□ -0.75
TSC22D1-203ENST00000458659 C1orf229Q6ZS94 237 aaPredicted RBP10.37□□□□□ -0.75
TSC22D1-203ENST00000458659 TTC28Q96AY4 2481 aa10.37□□□□□ -0.75
TSC22D1-203ENST00000458659 Q8N976 141 aa10.37□□□□□ -0.75
TSC22D1-203ENST00000458659 CFAP54Q96N23 3096 aa10.37□□□□□ -0.75
TSC22D1-203ENST00000458659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.37□□□□□ -0.752e-6■■■■□ 24
TSC22D1-203ENST00000458659 GAGE12HA6NDE8 117 aa10.37□□□□□ -0.75
TSC22D1-203ENST00000458659 FOXC1Q12948 553 aa10.37□□□□□ -0.75
TSC22D1-203ENST00000458659 RAB1BQ9H0U4 201 aa10.37□□□□□ -0.75
TSC22D1-203ENST00000458659 SPINK8P0C7L1 97 aa10.37□□□□□ -0.75
TSC22D1-203ENST00000458659 LOXL1Q08397 574 aaPredicted RBP10.37□□□□□ -0.75
TSC22D1-203ENST00000458659 NXT2Q9NPJ8 142 aaKnown RBP10.37□□□□□ -0.75
TSC22D1-203ENST00000458659 WISP2O76076 250 aa10.36□□□□□ -0.75
TSC22D1-203ENST00000458659 FAM104BQ5XKR9 115 aa10.36□□□□□ -0.75
TSC22D1-203ENST00000458659 GFRA4Q9GZZ7 299 aa10.36□□□□□ -0.75
TSC22D1-203ENST00000458659 UBTD1Q9HAC8 227 aa10.36□□□□□ -0.75
TSC22D1-203ENST00000458659 LGALS3P17931 250 aaKnown RBP10.36□□□□□ -0.75
TSC22D1-203ENST00000458659 HCFC1P51610 2035 aa10.36□□□□□ -0.75
TSC22D1-203ENST00000458659 HAX1O00165 279 aa10.36□□□□□ -0.75
TSC22D1-203ENST00000458659 TMEM30BQ3MIR4 351 aa10.36□□□□□ -0.75
TSC22D1-203ENST00000458659 ZNF492Q9P255 531 aa10.36□□□□□ -0.75
TSC22D1-203ENST00000458659 GATA1P15976 413 aaPredicted RBP10.36□□□□□ -0.75
TSC22D1-203ENST00000458659 IGHV3OR16-10A0A075B7F0 116 aa10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 NPIPB6E9PJ23 425 aa10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 SNCGO76070 127 aa10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 IGHV4-39P01824 125 aa10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 FXYD2P54710 66 aa10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 CLEC19AQ6UXS0 136 aa10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 SIGLEC9Q9Y336 463 aa10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 CHTOPQ9Y3Y2 248 aaKnown RBP10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 TNFRSF6BO95407 300 aa10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 PPBPP02775 128 aa10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 LTAP01374 205 aa10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 IGHV1-8P0DP01 117 aa10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 Q8N7P7 452 aa10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 LINC01560Q8TB33 94 aa10.35□□□□□ -0.75
TSC22D1-203ENST00000458659 SPRY2O43597 315 aa10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 WFDC2Q14508 124 aa10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 C3orf36Q3SXR2 165 aa10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 CT83Q5H943 113 aa10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 KHDC1LQ5JSQ8 128 aa10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 RITA1Q96K30 269 aa10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 METTL26Q96S19 204 aa10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 NDUFS7O75251 213 aa10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 RNF182Q8N6D2 247 aa10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 NPFFR1Q9GZQ6 430 aa10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 EFNA4P52798 201 aa10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 LINC01545Q5VT33 79 aa10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 ZNF474Q6S9Z5 364 aaPredicted RBP10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 MRPL35Q9NZE8 188 aaKnown RBP10.34□□□□□ -0.75
TSC22D1-203ENST00000458659 C22orf46C9J442 243 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 PLSCR4Q9NRQ2 329 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 ZNF256Q9Y2P7 627 aaPredicted RBP10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 IGHV1-3A0A0C4DH29 117 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 KLRD1Q13241 179 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 SYT8Q8NBV8 401 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 GEMIN7Q9H840 131 aaKnown RBP10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 LINC00527Q9UJ94 153 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 LY6HO94772 140 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 HLA-DMBP28068 263 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 SP5Q6BEB4 398 aaPredicted RBP10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 PVRIGQ6DKI7 326 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 DDB2Q92466 427 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 MSRB1Q9NZV6 116 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 TRBV19A0A075B6N1 114 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 PSMB11A5LHX3 300 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 LAGE3Q14657 143 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 LGALS9BQ3B8N2 356 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 LGALS9CQ6DKI2 356 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 OR10J6PQ8NGY7 276 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 ATG2AQ2TAZ0 1938 aa10.33□□□□□ -0.76
TSC22D1-203ENST00000458659 NBR2O15453 112 aa10.32□□□□□ -0.76
TSC22D1-203ENST00000458659 NEU4Q8WWR8 484 aaPredicted RBP10.32□□□□□ -0.76
TSC22D1-203ENST00000458659 VGLL1Q99990 258 aa10.32□□□□□ -0.76
TSC22D1-203ENST00000458659 PRSS46E5RG02 174 aa10.32□□□□□ -0.76
TSC22D1-203ENST00000458659 SRSF1Q07955 248 aaKnown RBP eCLIP10.32□□□□□ -0.76
TSC22D1-203ENST00000458659 TEX29Q8N6K0 151 aa10.32□□□□□ -0.76
TSC22D1-203ENST00000458659 ATP6V0BQ99437 205 aa10.32□□□□□ -0.76
TSC22D1-203ENST00000458659 ANXA2RQ3ZCQ2 193 aa10.32□□□□□ -0.76
TSC22D1-203ENST00000458659 RAX2Q96IS3 184 aa10.32□□□□□ -0.76
TSC22D1-203ENST00000458659 DPM3Q9P2X0 92 aa10.32□□□□□ -0.76
TSC22D1-203ENST00000458659 NDPQ00604 133 aa10.31□□□□□ -0.76
TSC22D1-203ENST00000458659 ATP5G2Q06055 141 aa10.31□□□□□ -0.76
TSC22D1-203ENST00000458659 PIEZO2Q9H5I5 2752 aa10.31□□□□□ -0.76
TSC22D1-203ENST00000458659 TRAV2A0A0B4J234 112 aa10.31□□□□□ -0.76
TSC22D1-203ENST00000458659 CPAMD8Q8IZJ3 1885 aa10.31□□□□□ -0.76
TSC22D1-203ENST00000458659 MBD6Q96DN6 1003 aa10.31□□□□□ -0.76
TSC22D1-203ENST00000458659 SHANK2-AS3Q9BTD1 123 aa10.31□□□□□ -0.76
TSC22D1-203ENST00000458659 PRUNE2Q8WUY3 3088 aa10.31□□□□□ -0.76
TSC22D1-203ENST00000458659 SPEGQ15772 3267 aa10.31□□□□□ -0.76
TSC22D1-203ENST00000458659 RNASE4P34096 147 aaKnown RBP10.3□□□□□ -0.76
TSC22D1-203ENST00000458659 NPC2P61916 151 aa10.3□□□□□ -0.76
TSC22D1-203ENST00000458659 ZNF56Q15929 161 aa10.3□□□□□ -0.76
TSC22D1-203ENST00000458659 LINC01549A6NIU2 74 aa10.3□□□□□ -0.76
TSC22D1-203ENST00000458659 ZNF833PQ6ZTB9 187 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms