RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 SMCO4Q9NRQ5 59 aa1.8□□□□□ -2.12
VPS8-211ENST00000452140 TXNL4BQ9NX01 149 aaKnown RBP1.8□□□□□ -2.12
VPS8-211ENST00000452140 NDUFB11Q9NX14 153 aa1.8□□□□□ -2.12
VPS8-211ENST00000452140 LINC00588Q9Y4M8 146 aa1.8□□□□□ -2.12
VPS8-211ENST00000452140 AMMECR1Q9Y4X0 333 aaPredicted RBP1.8□□□□□ -2.12
VPS8-211ENST00000452140 PRR14LQ5THK1 2151 aa1.8□□□□□ -2.12
VPS8-211ENST00000452140 PTPRJQ12913 1337 aa1.8□□□□□ -2.12
VPS8-211ENST00000452140 COL11A1P12107 1806 aaPredicted RBP1.8□□□□□ -2.12
VPS8-211ENST00000452140 ZNF236Q9UL36 1845 aa1.8□□□□□ -2.12
VPS8-211ENST00000452140 KIAA1549Q9HCM3 1950 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 SCN8AQ9UQD0 1980 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 CACNA1DQ01668 2161 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 TRAV41A0A0B4J266 112 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 RIIAD1A6NNX1 92 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 E7EQ34 232 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 C3orf84H3BNL1 204 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 M0QZK8 103 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 GNGT2O14610 69 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 HIST1H2BKO60814 126 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 OR2J2O76002 312 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 MT-ND4LP03901 98 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 HIST1H2BJP06899 126 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 SRP19P09132 144 aaKnown RBP1.79□□□□□ -2.12
VPS8-211ENST00000452140 CXCL1P09341 107 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 SFTA3P0C7M3 94 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 GZMBP10144 247 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 FABP4P15090 132 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 NFYAP23511 347 aaPredicted RBP1.79□□□□□ -2.12
VPS8-211ENST00000452140 HIST1H2BOP23527 126 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 ATP6V0CP27449 155 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 SRIP30626 198 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 BRS3P32247 399 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 HIST1H2BBP33778 126 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 PIGPP57054 158 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 HIST1H2BDP58876 126 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 TSPEAR-AS2P59090 65 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 HIST1H2BCP62807 126 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 INSL4Q14641 139 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 HIST2H2BEQ16778 126 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 SPANXN3Q5MJ09 141 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.79□□□□□ -2.12
VPS8-211ENST00000452140 Q6Q795 121 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 SSX8Q7RTT4 187 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 TCF24Q7RTU0 167 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 C3orf22Q8N5N4 141 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 ZFAND2AQ8N6M9 145 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 OR4S1Q8NGB4 309 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 OR4K15Q8NH41 348 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 HIST1H2BHQ93079 126 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 TMEM203Q969S6 136 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 TOMM6Q96B49 74 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 PYURFQ96I23 114 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 HIST1H2BNQ99877 126 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 HIST1H2BMQ99879 126 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 HIST1H2BLQ99880 126 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 MRPL57Q9BQC6 102 aaKnown RBP1.79□□□□□ -2.12
VPS8-211ENST00000452140 SEC11CQ9BY50 192 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 CHST6Q9GZX3 395 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 CXCL16Q9H2A7 254 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 CACFD1Q9UGQ2 172 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 GNG8Q9UK08 70 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 ROBO1Q9Y6N7 1651 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 COL5A1P20908 1838 aaPredicted RBP1.79□□□□□ -2.12
VPS8-211ENST00000452140 ANAPC1Q9H1A4 1944 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 EML5Q05BV3 1969 aa1.79□□□□□ -2.12
VPS8-211ENST00000452140 TRIOBPQ9H2D6 2365 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 MYO16Q9Y6X6 1858 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 TRBV24-1A0A075B6N3 115 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 MDFIC2A0A1B0GVS7 189 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 LOC285095A0A1B0GVY8 99 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 C7orf77A4D0Y5 90 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 TMEM235A6NFC5 223 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 GGT3PA6NGU5 568 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 HMSDA8MTL9 139 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 ZNF727A8MUV8 499 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 TRAPPC2LH3BP13 241 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 SLC17A3O00476 420 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 GEMIN2O14893 280 aaKnown RBP1.78□□□□□ -2.12
VPS8-211ENST00000452140 SH2D1AO60880 128 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 SOD1P00441 154 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 IFNA17P01571 189 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 IGKV1-5P01602 117 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 CTSGP08311 255 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 LINC00032P0C843 101 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 TRGC1P0CF51 173 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 SLC25A16P16260 332 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 RPL7P18124 248 aaKnown RBP1.78□□□□□ -2.12
VPS8-211ENST00000452140 FGF7P21781 194 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 G6PCP35575 357 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 CSN1S1P47710 185 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 POLR2JP52435 117 aaKnown RBP1.78□□□□□ -2.12
VPS8-211ENST00000452140 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 CKS1BP61024 79 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 LGALS9BQ3B8N2 356 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 TDRG1Q3Y452 100 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 AADACL3Q5VUY0 350 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 LGALS9CQ6DKI2 356 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 RASL11AQ6T310 242 aa1.78□□□□□ -2.12
VPS8-211ENST00000452140 TOMM20LQ6UXN7 152 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms