RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 LCN12Q6JVE5 192 aa12.05□□□□□ -0.48
SNX13-204ENST00000444712 UTP20O75691 2785 aaKnown RBP12.05□□□□□ -0.48
SNX13-204ENST00000444712 IGHV3-11P01762 117 aa12.04□□□□□ -0.48
SNX13-204ENST00000444712 CRISP2P16562 243 aa12.04□□□□□ -0.48
SNX13-204ENST00000444712 RBPMS2Q6ZRY4 209 aaKnown RBP12.04□□□□□ -0.48
SNX13-204ENST00000444712 OR2D3Q8NGH3 330 aa12.04□□□□□ -0.48
SNX13-204ENST00000444712 ZNF207O43670 478 aaKnown RBP12.04□□□□□ -0.48
SNX13-204ENST00000444712 PDZD11Q5EBL8 140 aa12.04□□□□□ -0.48
SNX13-204ENST00000444712 Q6AWC8 147 aa12.04□□□□□ -0.48
SNX13-204ENST00000444712 GLMPQ8WWB7 406 aa12.04□□□□□ -0.48
SNX13-204ENST00000444712 PEF1Q9UBV8 284 aaKnown RBP12.04□□□□□ -0.48
SNX13-204ENST00000444712 IGKV2-40A0A087WW87 121 aaPredicted RBP12.03□□□□□ -0.48
SNX13-204ENST00000444712 IGKV2D-40P01614 121 aaPredicted RBP12.03□□□□□ -0.48
SNX13-204ENST00000444712 TRBV12-3P01733 135 aa12.03□□□□□ -0.48
SNX13-204ENST00000444712 APOHP02749 345 aaPredicted RBP12.03□□□□□ -0.48
SNX13-204ENST00000444712 FABP4P15090 132 aa12.03□□□□□ -0.48
SNX13-204ENST00000444712 TMEM18Q96B42 140 aa12.03□□□□□ -0.48
SNX13-204ENST00000444712 PRR25Q96S07 402 aa12.03□□□□□ -0.48
SNX13-204ENST00000444712 FBN2P35556 2912 aa12.03□□□□□ -0.48
SNX13-204ENST00000444712 IGHV3-66A0A0C4DH42 116 aa12.03□□□□□ -0.48
SNX13-204ENST00000444712 HOXA3O43365 443 aaPredicted RBP12.03□□□□□ -0.48
SNX13-204ENST00000444712 APCSP02743 223 aa12.03□□□□□ -0.48
SNX13-204ENST00000444712 FOXA3P55318 350 aaPredicted RBP12.03□□□□□ -0.48
SNX13-204ENST00000444712 Q0VG73 95 aa12.03□□□□□ -0.48
SNX13-204ENST00000444712 FAM106AQ4KMX7 169 aa12.03□□□□□ -0.48
SNX13-204ENST00000444712 OR10D4PQ8NGN7 298 aa12.03□□□□□ -0.48
SNX13-204ENST00000444712 HIST1H2BLQ99880 126 aa12.03□□□□□ -0.48
SNX13-204ENST00000444712 CRYBG3Q68DQ2 2970 aa12.02□□□□□ -0.48
SNX13-204ENST00000444712 ELANEP08246 267 aa12.02□□□□□ -0.49
SNX13-204ENST00000444712 BMI1P35226 326 aa12.02□□□□□ -0.49
SNX13-204ENST00000444712 HBBP68871 147 aa12.02□□□□□ -0.49
SNX13-204ENST00000444712 FAM162BQ5T6X4 162 aa12.02□□□□□ -0.49
SNX13-204ENST00000444712 C8orf86Q6ZUL3 223 aa12.02□□□□□ -0.49
SNX13-204ENST00000444712 TCF24Q7RTU0 167 aa12.02□□□□□ -0.49
SNX13-204ENST00000444712 TMEM86BQ8N661 226 aa12.02□□□□□ -0.49
SNX13-204ENST00000444712 PACRGQ96M98 296 aaPredicted RBP12.02□□□□□ -0.49
SNX13-204ENST00000444712 USP9YO00507 2555 aaPredicted RBP12.02□□□□□ -0.49
SNX13-204ENST00000444712 KMT2BQ9UMN6 2715 aaPredicted RBP12.01□□□□□ -0.49
SNX13-204ENST00000444712 A0A1B0GXF2 115 aa12.01□□□□□ -0.49
SNX13-204ENST00000444712 K7EMT4 169 aa12.01□□□□□ -0.49
SNX13-204ENST00000444712 FOXE3Q13461 319 aa12.01□□□□□ -0.49
SNX13-204ENST00000444712 TMEM95Q3KNT9 176 aa12.01□□□□□ -0.49
SNX13-204ENST00000444712 OR10J3Q5JRS4 329 aa12.01□□□□□ -0.49
SNX13-204ENST00000444712 UNQ9165/PRO28630Q6UXU0 137 aa12.01□□□□□ -0.49
SNX13-204ENST00000444712 IGHV3OR16-13A0A075B7E8 117 aa12.01□□□□□ -0.49
SNX13-204ENST00000444712 IGHV3-49A0A0A0MS15 119 aa12.01□□□□□ -0.49
SNX13-204ENST00000444712 IGHV3-74A0A0B4J1X5 117 aa12.01□□□□□ -0.49
SNX13-204ENST00000444712 FRMD6-AS1P0C7T7 363 aa12.01□□□□□ -0.49
SNX13-204ENST00000444712 C8orf49Q96NF6 230 aa12.01□□□□□ -0.49
SNX13-204ENST00000444712 ZNF702PQ9H963 129 aa12.01□□□□□ -0.49
SNX13-204ENST00000444712 DAZ1Q9NQZ3 744 aaKnown RBP12.01□□□□□ -0.49
SNX13-204ENST00000444712 A0A1B0GW15 77 aa12□□□□□ -0.49
SNX13-204ENST00000444712 HLA-DMBP28068 263 aa12□□□□□ -0.49
SNX13-204ENST00000444712 RPS20P60866 119 aaKnown RBP12□□□□□ -0.49
SNX13-204ENST00000444712 GPHB5Q86YW7 130 aa12□□□□□ -0.49
SNX13-204ENST00000444712 WFDC11Q8NEX6 87 aa12□□□□□ -0.49
SNX13-204ENST00000444712 GTSF1Q8WW33 167 aa12□□□□□ -0.49
SNX13-204ENST00000444712 C16orf92Q96LL3 132 aa12□□□□□ -0.49
SNX13-204ENST00000444712 PTPN13Q12923 2485 aa12□□□□□ -0.49
SNX13-204ENST00000444712 CSPG4Q6UVK1 2322 aa12□□□□□ -0.49
SNX13-204ENST00000444712 IGHV7-4-1A0A0J9YVY3 117 aa11.99□□□□□ -0.49
SNX13-204ENST00000444712 AMBPP02760 352 aa11.99□□□□□ -0.49
SNX13-204ENST00000444712 SRSF2Q01130 221 aaKnown RBP11.99□□□□□ -0.49
SNX13-204ENST00000444712 SAMD13Q5VXD3 122 aa11.99□□□□□ -0.49
SNX13-204ENST00000444712 IGFL4Q6B9Z1 124 aa11.99□□□□□ -0.49
SNX13-204ENST00000444712 BORCS7Q96B45 105 aa11.99□□□□□ -0.49
SNX13-204ENST00000444712 PGLYRP4Q96LB8 373 aa11.99□□□□□ -0.49
SNX13-204ENST00000444712 FOXC2Q99958 501 aa11.99□□□□□ -0.49
SNX13-204ENST00000444712 VGLL1Q99990 258 aa11.99□□□□□ -0.49
SNX13-204ENST00000444712 UFC1Q9Y3C8 167 aa11.99□□□□□ -0.49
SNX13-204ENST00000444712 ZNF705FA8MVS1 300 aaPredicted RBP11.99□□□□□ -0.49
SNX13-204ENST00000444712 ESDP10768 282 aa11.99□□□□□ -0.49
SNX13-204ENST00000444712 DNLZQ5SXM8 178 aa11.99□□□□□ -0.49
SNX13-204ENST00000444712 LCNL1Q6ZST4 164 aa11.99□□□□□ -0.49
SNX13-204ENST00000444712 BAGE3Q86Y29 109 aa11.99□□□□□ -0.49
SNX13-204ENST00000444712 TRAV8-2A0A0B4J237 113 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 GRIFINA4D1Z8 144 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 TMEM189A5PLL7 270 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 A8MWP6 167 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 HAX1O00165 279 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 SH2D1AO60880 128 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 CRIP1P50238 77 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 RIGQ13278 110 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 TMEM78Q5T7P6 136 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 Q8N2B8 174 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 RNF182Q8N6D2 247 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 PPP1R14DQ9NXH3 145 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 DOPEY2Q9Y3R5 2298 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 SMAD7O15105 426 aaKnown RBP11.98□□□□□ -0.49
SNX13-204ENST00000444712 CAMPP49913 170 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 PAFAH1B2P68402 229 aa11.98□□□□□ -0.49
SNX13-204ENST00000444712 NAV2Q8IVL1 2488 aa11.97□□□□□ -0.49
SNX13-204ENST00000444712 A0A1B0GUT8 65 aa11.97□□□□□ -0.49
SNX13-204ENST00000444712 C9orf47Q6ZRZ4 202 aa11.97□□□□□ -0.49
SNX13-204ENST00000444712 SIGLECL1Q8N7X8 197 aa11.97□□□□□ -0.49
SNX13-204ENST00000444712 RNF152Q8N8N0 203 aa11.97□□□□□ -0.49
SNX13-204ENST00000444712 MYOZ3Q8TDC0 251 aa11.97□□□□□ -0.49
SNX13-204ENST00000444712 NRN1Q9NPD7 142 aa11.97□□□□□ -0.49
SNX13-204ENST00000444712 NIT2Q9NQR4 276 aa11.97□□□□□ -0.49
SNX13-204ENST00000444712 VPS13CQ709C8 3753 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms