RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 LINC00854A0A1B0GVQ3 168 aa12.53□□□□□ -0.4
UPK3BP1-201ENST00000428678 K7EPK0 472 aa12.53□□□□□ -0.4
UPK3BP1-201ENST00000428678 GOSR2O14653 212 aa12.53□□□□□ -0.4
UPK3BP1-201ENST00000428678 NXPH4O95158 308 aa12.53□□□□□ -0.4
UPK3BP1-201ENST00000428678 METTL15P1P0C7V9 234 aa12.53□□□□□ -0.4
UPK3BP1-201ENST00000428678 PXDC1Q5TGL8 231 aa12.53□□□□□ -0.4
UPK3BP1-201ENST00000428678 TEPPQ6URK8 271 aa12.53□□□□□ -0.4
UPK3BP1-201ENST00000428678 TRIM63Q969Q1 353 aa12.53□□□□□ -0.4
UPK3BP1-201ENST00000428678 TNFRSF18Q9Y5U5 241 aa12.53□□□□□ -0.4
UPK3BP1-201ENST00000428678 COX7A2P2O60397 106 aa12.52□□□□□ -0.41
UPK3BP1-201ENST00000428678 IFNA5P01569 189 aa12.52□□□□□ -0.41
UPK3BP1-201ENST00000428678 CT45A10P0DMU9 189 aa12.52□□□□□ -0.41
UPK3BP1-201ENST00000428678 ZNF546Q86UE3 836 aa12.52□□□□□ -0.41
UPK3BP1-201ENST00000428678 SMIM8Q96KF7 97 aa12.52□□□□□ -0.41
UPK3BP1-201ENST00000428678 MRPS26Q9BYN8 205 aaKnown RBP12.52□□□□□ -0.41
UPK3BP1-201ENST00000428678 GSN-AS1Q9NRJ2 163 aa12.52□□□□□ -0.41
UPK3BP1-201ENST00000428678 PXMP4Q9Y6I8 212 aa12.52□□□□□ -0.41
UPK3BP1-201ENST00000428678 TRGV1A0A0A0MS02 117 aa12.51□□□□□ -0.41
UPK3BP1-201ENST00000428678 FNDC10F2Z333 226 aa12.51□□□□□ -0.41
UPK3BP1-201ENST00000428678 DNAH10OSP0CZ25 163 aa12.51□□□□□ -0.41
UPK3BP1-201ENST00000428678 KRTAP10-1P60331 282 aa12.51□□□□□ -0.41
UPK3BP1-201ENST00000428678 PYDC2Q56P42 97 aa12.51□□□□□ -0.41
UPK3BP1-201ENST00000428678 ZBTB8BQ8NAP8 495 aaPredicted RBP12.51□□□□□ -0.41
UPK3BP1-201ENST00000428678 OR10P1Q8NGE3 313 aa12.51□□□□□ -0.41
UPK3BP1-201ENST00000428678 ZNF431Q8TF32 576 aaPredicted RBP12.51□□□□□ -0.41
UPK3BP1-201ENST00000428678 RAB2BQ8WUD1 216 aa12.51□□□□□ -0.41
UPK3BP1-201ENST00000428678 ODF3Q96PU9 254 aa12.51□□□□□ -0.41
UPK3BP1-201ENST00000428678 FUT9Q9Y231 359 aa12.51□□□□□ -0.41
UPK3BP1-201ENST00000428678 ICOSQ9Y6W8 199 aa12.51□□□□□ -0.41
UPK3BP1-201ENST00000428678 MORN5Q5VZ52 161 aa12.5□□□□□ -0.41
UPK3BP1-201ENST00000428678 TMEM14EPQ6UXP3 125 aa12.5□□□□□ -0.41
UPK3BP1-201ENST00000428678 NFE4Q86UQ8 179 aa12.5□□□□□ -0.41
UPK3BP1-201ENST00000428678 ZNF680Q8NEM1 530 aa12.5□□□□□ -0.41
UPK3BP1-201ENST00000428678 SLIRPQ9GZT3 109 aaKnown RBP12.5□□□□□ -0.41
UPK3BP1-201ENST00000428678 NPIPB6E9PJ23 425 aa12.49□□□□□ -0.41
UPK3BP1-201ENST00000428678 H3BQ15 152 aa12.49□□□□□ -0.41
UPK3BP1-201ENST00000428678 AGPAT2O15120 278 aa12.49□□□□□ -0.41
UPK3BP1-201ENST00000428678 PAX4O43316 350 aa12.49□□□□□ -0.41
UPK3BP1-201ENST00000428678 SCGB1D2O95969 90 aa12.49□□□□□ -0.41
UPK3BP1-201ENST00000428678 IGLC2P0DOY2 106 aa12.49□□□□□ -0.41
UPK3BP1-201ENST00000428678 OPCMLQ14982 345 aa12.49□□□□□ -0.41
UPK3BP1-201ENST00000428678 C18orf15Q96N68 181 aa12.49□□□□□ -0.41
UPK3BP1-201ENST00000428678 A0A087WTM6 91 aa12.48□□□□□ -0.41
UPK3BP1-201ENST00000428678 C9orf170A2RU37 121 aa12.48□□□□□ -0.41
UPK3BP1-201ENST00000428678 SMR3BP02814 79 aaPredicted RBP12.48□□□□□ -0.41
UPK3BP1-201ENST00000428678 UBE2MP61081 183 aaKnown RBP12.48□□□□□ -0.41
UPK3BP1-201ENST00000428678 ICAM4Q14773 271 aa12.48□□□□□ -0.41
UPK3BP1-201ENST00000428678 C10orf113Q5VZT2 155 aa12.48□□□□□ -0.41
UPK3BP1-201ENST00000428678 C11orf72Q8NBR9 251 aa12.48□□□□□ -0.41
UPK3BP1-201ENST00000428678 TMEM37Q8WXS4 190 aa12.48□□□□□ -0.41
UPK3BP1-201ENST00000428678 SAT2Q96F10 170 aaPredicted RBP12.48□□□□□ -0.41
UPK3BP1-201ENST00000428678 C7orf71A4D174 169 aa12.47□□□□□ -0.41
UPK3BP1-201ENST00000428678 ZNF324O75467 553 aaPredicted RBP12.47□□□□□ -0.41
UPK3BP1-201ENST00000428678 IGHV3-53P01767 116 aa12.47□□□□□ -0.41
UPK3BP1-201ENST00000428678 SLC25A5P05141 298 aaKnown RBP12.47□□□□□ -0.41
UPK3BP1-201ENST00000428678 TMBIM6P55061 237 aa12.47□□□□□ -0.41
UPK3BP1-201ENST00000428678 MDFICQ9P1T7 246 aa12.47□□□□□ -0.41
UPK3BP1-201ENST00000428678 ARL16Q0P5N6 197 aa12.46□□□□□ -0.41
UPK3BP1-201ENST00000428678 MGST2Q99735 147 aa12.46□□□□□ -0.41
UPK3BP1-201ENST00000428678 BCL7BQ9BQE9 202 aa12.46□□□□□ -0.41
UPK3BP1-201ENST00000428678 KLF12Q9Y4X4 402 aa12.46□□□□□ -0.41
UPK3BP1-201ENST00000428678 TRAV9-2A0A087WT02 112 aa12.45□□□□□ -0.42
UPK3BP1-201ENST00000428678 NOL3O60936 208 aaKnown RBP12.45□□□□□ -0.42
UPK3BP1-201ENST00000428678 TSC22D2O75157 780 aa12.45□□□□□ -0.42
UPK3BP1-201ENST00000428678 ERCC8Q13216 396 aa12.45□□□□□ -0.42
UPK3BP1-201ENST00000428678 BTN1A1Q13410 526 aa12.45□□□□□ -0.42
UPK3BP1-201ENST00000428678 GUK1Q16774 197 aa12.45□□□□□ -0.42
UPK3BP1-201ENST00000428678 EIF4E3Q8N5X7 224 aaKnown RBP12.45□□□□□ -0.42
UPK3BP1-201ENST00000428678 DEDD2Q8WXF8 326 aa12.45□□□□□ -0.42
UPK3BP1-201ENST00000428678 TRAV5A0A0B4J249 113 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 SPINK4O60575 86 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 RNASE4P34096 147 aaKnown RBP12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 TCL1AP56279 114 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 TAS2R30P59541 319 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 CD300CQ08708 224 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 IAH1Q2TAA2 248 aaPredicted RBP12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 ANXA2RQ3ZCQ2 193 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 C4orf46Q504U0 113 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 LYPD5Q6UWN5 251 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 ST6GAL2Q96JF0 529 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 GGACTQ9BVM4 153 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 DNAJC4Q9NNZ3 241 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 PRO0255Q9UI72 69 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 LY96Q9Y6Y9 160 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 V9GYH0 126 aa12.44□□□□□ -0.42
UPK3BP1-201ENST00000428678 FAM229AH3BQW9 127 aa12.43□□□□□ -0.42
UPK3BP1-201ENST00000428678 M0R3E3 92 aa12.43□□□□□ -0.42
UPK3BP1-201ENST00000428678 GCSHP23434 173 aa12.43□□□□□ -0.42
UPK3BP1-201ENST00000428678 HAMPP81172 84 aa12.43□□□□□ -0.42
UPK3BP1-201ENST00000428678 C8orf49Q96NF6 230 aa12.43□□□□□ -0.42
UPK3BP1-201ENST00000428678 LINC00467Q9BRT7 94 aa12.43□□□□□ -0.42
UPK3BP1-201ENST00000428678 MRPL16Q9NX20 251 aaKnown RBP12.43□□□□□ -0.42
UPK3BP1-201ENST00000428678 MSRB1Q9NZV6 116 aa12.43□□□□□ -0.42
UPK3BP1-201ENST00000428678 GSKIPQ9P0R6 139 aa12.43□□□□□ -0.42
UPK3BP1-201ENST00000428678 RCL1Q9Y2P8 373 aaKnown RBP12.43□□□□□ -0.42
UPK3BP1-201ENST00000428678 KLLNB2CW77 178 aa12.42□□□□□ -0.42
UPK3BP1-201ENST00000428678 H3BMQ9 156 aa12.42□□□□□ -0.42
UPK3BP1-201ENST00000428678 OR4E1P0C645 316 aa12.42□□□□□ -0.42
UPK3BP1-201ENST00000428678 CAMLGP49069 296 aa12.42□□□□□ -0.42
UPK3BP1-201ENST00000428678 SLAQ13239 276 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms