RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 FLI1Q01543 452 aaPredicted RBP11.58□□□□□ -0.56
ACTB-204ENST00000425660 RPEL1Q2QD12 228 aa11.58□□□□□ -0.56
ACTB-204ENST00000425660 TCTEX1D4Q5JR98 221 aa11.58□□□□□ -0.56
ACTB-204ENST00000425660 RNASE7Q9H1E1 156 aaKnown RBP11.58□□□□□ -0.56
ACTB-204ENST00000425660 ZFP30Q9Y2G7 519 aa11.58□□□□□ -0.56
ACTB-204ENST00000425660 UFC1Q9Y3C8 167 aa11.58□□□□□ -0.56
ACTB-204ENST00000425660 FBLL1A6NHQ2 334 aaKnown RBP11.58□□□□□ -0.56
ACTB-204ENST00000425660 A8MWP6 167 aa11.58□□□□□ -0.56
ACTB-204ENST00000425660 LGALS9O00182 355 aa11.58□□□□□ -0.56
ACTB-204ENST00000425660 FOSL1P15407 271 aa11.58□□□□□ -0.56
ACTB-204ENST00000425660 TM4SF20Q53R12 229 aa11.58□□□□□ -0.56
ACTB-204ENST00000425660 C8orf86Q6ZUL3 223 aa11.58□□□□□ -0.56
ACTB-204ENST00000425660 REC114Q7Z4M0 266 aa11.58□□□□□ -0.56
ACTB-204ENST00000425660 WFDC12Q8WWY7 111 aa11.58□□□□□ -0.56
ACTB-204ENST00000425660 C16orf95Q9H693 158 aa11.58□□□□□ -0.56
ACTB-204ENST00000425660 SMPXQ9UHP9 88 aa11.58□□□□□ -0.56
ACTB-204ENST00000425660 MAST4O15021 2626 aa11.57□□□□□ -0.56
ACTB-204ENST00000425660 MRPL53Q96EL3 112 aaKnown RBP11.57□□□□□ -0.56
ACTB-204ENST00000425660 RHPN1-AS1Q9BWJ2 59 aa11.57□□□□□ -0.56
ACTB-204ENST00000425660 BIN3Q9NQY0 253 aa11.57□□□□□ -0.56
ACTB-204ENST00000425660 CLEC5AQ9NY25 188 aa11.57□□□□□ -0.56
ACTB-204ENST00000425660 IL36BQ9NZH7 164 aa11.57□□□□□ -0.56
ACTB-204ENST00000425660 IGHV4OR15-8A0A075B7B6 117 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 A0A087WW49 117 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 TRAV8-2A0A0B4J237 113 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 CHEK1O14757 476 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 TYMSP04818 313 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 LCN12Q6JVE5 192 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 BTF3L4Q96K17 158 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 MLXQ9UH92 298 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 PSG8Q9UQ74 426 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 TRAV9-1A0A075B6T8 112 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 A0A1W2PPQ1 181 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 TMEM213A2RRL7 107 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 HLA-DMBP28068 263 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 RPS10P46783 165 aaKnown RBP11.56□□□□□ -0.56
ACTB-204ENST00000425660 FAM3BP58499 235 aaPredicted RBP11.56□□□□□ -0.56
ACTB-204ENST00000425660 IGFL4Q6B9Z1 124 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 COX8CQ7Z4L0 72 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 PRNTQ86SH4 94 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 C4orf3Q8WVX3 66 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 ZNF492Q9P255 531 aa11.56□□□□□ -0.56
ACTB-204ENST00000425660 F8P00451 2351 aa11.55□□□□□ -0.56
ACTB-204ENST00000425660 RBAKDNA6NC62 111 aa11.55□□□□□ -0.56
ACTB-204ENST00000425660 C19orf71A6NCJ1 209 aa11.55□□□□□ -0.56
ACTB-204ENST00000425660 C1orf196B1AJZ1 125 aa11.55□□□□□ -0.56
ACTB-204ENST00000425660 SOCS3O14543 225 aa11.55□□□□□ -0.56
ACTB-204ENST00000425660 HOXD3P31249 432 aaPredicted RBP11.55□□□□□ -0.56
ACTB-204ENST00000425660 NUDT10Q8NFP7 164 aa11.55□□□□□ -0.56
ACTB-204ENST00000425660 NUDT11Q96G61 164 aa11.55□□□□□ -0.56
ACTB-204ENST00000425660 LINC00322Q6ZN03 302 aaPredicted RBP11.54□□□□□ -0.56
ACTB-204ENST00000425660 JMJD8Q96S16 334 aa11.54□□□□□ -0.56
ACTB-204ENST00000425660 SRD5A3Q9H8P0 318 aa11.54□□□□□ -0.56
ACTB-204ENST00000425660 NRN1Q9NPD7 142 aa11.54□□□□□ -0.56
ACTB-204ENST00000425660 IGKV2-40A0A087WW87 121 aaPredicted RBP11.53□□□□□ -0.56
ACTB-204ENST00000425660 SMIM27A0A1W2PRY6 76 aa11.53□□□□□ -0.56
ACTB-204ENST00000425660 ZNF705FA8MVS1 300 aaPredicted RBP11.53□□□□□ -0.56
ACTB-204ENST00000425660 IGKV2D-40P01614 121 aaPredicted RBP11.53□□□□□ -0.56
ACTB-204ENST00000425660 BMI1P35226 326 aa11.53□□□□□ -0.56
ACTB-204ENST00000425660 KLF5Q13887 457 aaPredicted RBP11.53□□□□□ -0.56
ACTB-204ENST00000425660 PRR27Q6MZM9 219 aa11.53□□□□□ -0.56
ACTB-204ENST00000425660 RNF182Q8N6D2 247 aa11.53□□□□□ -0.56
ACTB-204ENST00000425660 LINC01006Q8NI28 216 aa11.53□□□□□ -0.56
ACTB-204ENST00000425660 ZNF705GA8MUZ8 300 aaPredicted RBP11.53□□□□□ -0.56
ACTB-204ENST00000425660 NPIPB6E9PJ23 425 aa11.53□□□□□ -0.56
ACTB-204ENST00000425660 RAB5BP61020 215 aa11.53□□□□□ -0.56
ACTB-204ENST00000425660 C18orf65Q6ZTR6 163 aa11.53□□□□□ -0.56
ACTB-204ENST00000425660 NDUFA7O95182 113 aa11.52□□□□□ -0.57
ACTB-204ENST00000425660 EDN2P20800 178 aa11.52□□□□□ -0.57
ACTB-204ENST00000425660 SYNJ2BPP57105 145 aa11.52□□□□□ -0.57
ACTB-204ENST00000425660 CT83Q5H943 113 aa11.52□□□□□ -0.57
ACTB-204ENST00000425660 SAPCD1Q5SSQ6 148 aa11.52□□□□□ -0.57
ACTB-204ENST00000425660 ZC2HC1AQ96GY0 325 aa11.52□□□□□ -0.57
ACTB-204ENST00000425660 C16orf92Q96LL3 132 aa11.52□□□□□ -0.57
ACTB-204ENST00000425660 NSD1Q96L73 2696 aaPredicted RBP11.52□□□□□ -0.57
ACTB-204ENST00000425660 TEP1Q99973 2627 aaKnown RBP11.51□□□□□ -0.57
ACTB-204ENST00000425660 PRAC2D3DTV9 90 aa11.51□□□□□ -0.57
ACTB-204ENST00000425660 PHOX2AO14813 284 aa11.51□□□□□ -0.57
ACTB-204ENST00000425660 GATCO43716 136 aaKnown RBP11.51□□□□□ -0.57
ACTB-204ENST00000425660 PRR25Q96S07 402 aa11.51□□□□□ -0.57
ACTB-204ENST00000425660 VGLL1Q99990 258 aa11.51□□□□□ -0.57
ACTB-204ENST00000425660 LOC105371267A0A1B0GV96 52 aa11.51□□□□□ -0.57
ACTB-204ENST00000425660 LINC01619G3V211 115 aa11.51□□□□□ -0.57
ACTB-204ENST00000425660 TRGC2P03986 189 aa11.51□□□□□ -0.57
ACTB-204ENST00000425660 SAMD13Q5VXD3 122 aa11.51□□□□□ -0.57
ACTB-204ENST00000425660 GBGT1Q8N5D6 347 aa11.51□□□□□ -0.57
ACTB-204ENST00000425660 INAFM1C9JVW0 142 aa11.5□□□□□ -0.57
ACTB-204ENST00000425660 CA1P00915 261 aaPredicted RBP11.5□□□□□ -0.57
ACTB-204ENST00000425660 P01737 135 aa11.5□□□□□ -0.57
ACTB-204ENST00000425660 PRB4P10163 310 aaPredicted RBP11.5□□□□□ -0.57
ACTB-204ENST00000425660 DEFB136Q30KP8 78 aa11.5□□□□□ -0.57
ACTB-204ENST00000425660 ZFP82Q8N141 532 aa11.5□□□□□ -0.57
ACTB-204ENST00000425660 OR11H1Q8NG94 326 aa11.5□□□□□ -0.57
ACTB-204ENST00000425660 TSKUQ8WUA8 353 aa11.5□□□□□ -0.57
ACTB-204ENST00000425660 RPP21Q9H633 154 aaKnown RBP11.5□□□□□ -0.57
ACTB-204ENST00000425660 PPP1R14DQ9NXH3 145 aa11.5□□□□□ -0.57
ACTB-204ENST00000425660 C2orf70A6NJV1 201 aa11.49□□□□□ -0.57
ACTB-204ENST00000425660 CBLN1P23435 193 aa11.49□□□□□ -0.57
ACTB-204ENST00000425660 CRIP1P50238 77 aa11.49□□□□□ -0.57
ACTB-204ENST00000425660 C9orf47Q6ZRZ4 202 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms