RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 NUTF2P61970 127 aaKnown RBP7.57□□□□□ -1.2
CD44-207ENST00000425428 IFITM2Q01629 132 aa7.57□□□□□ -1.2
CD44-207ENST00000425428 MEF2BQ02080 365 aaPredicted RBP7.57□□□□□ -1.2
CD44-207ENST00000425428 STHQ8IWL8 128 aa7.57□□□□□ -1.2
CD44-207ENST00000425428 EXOC3-AS1Q8N2X6 119 aa7.57□□□□□ -1.2
CD44-207ENST00000425428 TUBA4BQ9H853 241 aa7.57□□□□□ -1.2
CD44-207ENST00000425428 S100A9P06702 114 aaKnown RBP7.56□□□□□ -1.2
CD44-207ENST00000425428 UBE2G1P62253 170 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 BEAN1Q3B7T3 259 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 TMEM78Q5T7P6 136 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 RNF182Q8N6D2 247 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 LYPD6BQ8NI32 183 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 PCNPQ8WW12 178 aaKnown RBP7.56□□□□□ -1.2
CD44-207ENST00000425428 NDFIP1Q9BT67 221 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 SMDT1Q9H4I9 107 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 SLC17A3O00476 420 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 NDUFB4O95168 129 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 CNN1P51911 297 aaKnown RBP7.56□□□□□ -1.2
CD44-207ENST00000425428 TOR2AQ5JU69 321 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 FOXI2Q6ZQN5 318 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 FAM210AQ96ND0 272 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 ATG101Q9BSB4 218 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 MAP6D1Q9H9H5 199 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 EPDR1Q9UM22 224 aa7.56□□□□□ -1.2
CD44-207ENST00000425428 G3V4G9 280 aa7.55□□□□□ -1.2
CD44-207ENST00000425428 SOCS3O14543 225 aa7.55□□□□□ -1.2
CD44-207ENST00000425428 AKR1C3P42330 323 aa7.55□□□□□ -1.2
CD44-207ENST00000425428 CCL20P78556 96 aa7.55□□□□□ -1.2
CD44-207ENST00000425428 HIST1H1AQ02539 215 aaPredicted RBP7.55□□□□□ -1.2
CD44-207ENST00000425428 EGFEM1PQ0D2K5 195 aa7.55□□□□□ -1.2
CD44-207ENST00000425428 ACTL10Q5JWF8 245 aa7.55□□□□□ -1.2
CD44-207ENST00000425428 SAMD5Q5TGI4 173 aa7.55□□□□□ -1.2
CD44-207ENST00000425428 IGFL4Q6B9Z1 124 aa7.55□□□□□ -1.2
CD44-207ENST00000425428 CYB561D1Q8N8Q1 229 aa7.55□□□□□ -1.2
CD44-207ENST00000425428 YTHDF2Q9Y5A9 579 aaKnown RBP7.55□□□□□ -1.2
CD44-207ENST00000425428 LOC102723971A0A1B0GUV8 181 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 RAB19A4D1S5 217 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 RBAKDNA6NC62 111 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 DIRC3C9JPN6 131 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 PEX7O00628 323 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 OR4B1Q8NGF8 309 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 LINC00477Q96M19 166 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 TREM1Q9NP99 234 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 MED9Q9NWA0 146 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 TRAV8-2A0A0B4J237 113 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 GGTLC3B5MD39 225 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 TCRAP04437 139 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 CD7P09564 240 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 TSPOP30536 169 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 CEBPGP53567 150 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 ZNF506Q5JVG8 444 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 GOLT1AQ6ZVE7 132 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 OR8A1Q8NGG7 326 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 FMC1Q96HJ9 113 aa7.54□□□□□ -1.2
CD44-207ENST00000425428 SAV1Q9H4B6 383 aaPredicted RBP7.54□□□□□ -1.2
CD44-207ENST00000425428 ZNF705FA8MVS1 300 aaPredicted RBP7.53□□□□□ -1.2
CD44-207ENST00000425428 TMEM250H0YL14 139 aa7.53□□□□□ -1.2
CD44-207ENST00000425428 M0R3E3 92 aa7.53□□□□□ -1.2
CD44-207ENST00000425428 NDUFS6O75380 124 aaKnown RBP7.53□□□□□ -1.2
CD44-207ENST00000425428 ATP5G3P48201 142 aa7.53□□□□□ -1.2
CD44-207ENST00000425428 NDUFA5Q16718 116 aa7.53□□□□□ -1.2
CD44-207ENST00000425428 UQCC3Q6UW78 93 aa7.53□□□□□ -1.2
CD44-207ENST00000425428 APRG1Q8IVJ8 170 aa7.53□□□□□ -1.2
CD44-207ENST00000425428 FAM24BQ8N5W8 94 aa7.53□□□□□ -1.2
CD44-207ENST00000425428 PRR25Q96S07 402 aa7.53□□□□□ -1.2
CD44-207ENST00000425428 HLA-DRB4P13762 266 aa7.52□□□□□ -1.21
CD44-207ENST00000425428 HLA-DMBP28068 263 aa7.52□□□□□ -1.21
CD44-207ENST00000425428 APOC4P55056 127 aa7.52□□□□□ -1.21
CD44-207ENST00000425428 ODF3L2Q3SX64 289 aa7.52□□□□□ -1.21
CD44-207ENST00000425428 SAPCD1Q5SSQ6 148 aa7.52□□□□□ -1.21
CD44-207ENST00000425428 TMEM75Q8N9X5 138 aa7.52□□□□□ -1.21
CD44-207ENST00000425428 C20orf173Q96LM9 149 aa7.52□□□□□ -1.21
CD44-207ENST00000425428 C1QTNF4Q9BXJ3 329 aa7.52□□□□□ -1.21
CD44-207ENST00000425428 SRD5A3Q9H8P0 318 aa7.52□□□□□ -1.21
CD44-207ENST00000425428 HLA-DRB4X5D2U9 266 aa7.52□□□□□ -1.21
CD44-207ENST00000425428 ANK2Q01484 3957 aa7.52□□□□□ -1.21
CD44-207ENST00000425428 A0A0J9YX75 114 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 AMBPP02760 352 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 LEPP41159 167 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 ZNF138P52744 262 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 GNG5P63218 68 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 MORN3Q6PF18 240 aaPredicted RBP7.51□□□□□ -1.21
CD44-207ENST00000425428 COMMD7Q86VX2 200 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 RARRES2Q99969 163 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 BIN3Q9NQY0 253 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 VWFP04275 2813 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 IGKV2-40A0A087WW87 121 aaPredicted RBP7.51□□□□□ -1.21
CD44-207ENST00000425428 LOC102724200A0A096LPH7 203 aaPredicted RBP7.51□□□□□ -1.21
CD44-207ENST00000425428 KNCNA6PVL3 124 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 IGKV2D-40P01614 121 aaPredicted RBP7.51□□□□□ -1.21
CD44-207ENST00000425428 IGKV3-20P01619 116 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 CT45A10P0DMU9 189 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 TAS2R60P59551 318 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 FLI1Q01543 452 aaPredicted RBP7.51□□□□□ -1.21
CD44-207ENST00000425428 ZNF674Q2M3X9 581 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 FAM74A3Q4VXF1 159 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 C9orf47Q6ZRZ4 202 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 PRNTQ86SH4 94 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 CCDC28AQ8IWP9 274 aa7.51□□□□□ -1.21
CD44-207ENST00000425428 DEFB125Q8N687 156 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms