RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 H3BMM0 161 aa6.82□□□□□ -1.32
PDGFC-202ENST00000422544 IGKV3-20P01619 116 aa6.82□□□□□ -1.32
PDGFC-202ENST00000422544 ZNF705DP0CH99 300 aaPredicted RBP6.82□□□□□ -1.32
PDGFC-202ENST00000422544 ZNF705BP0CI00 300 aaPredicted RBP6.82□□□□□ -1.32
PDGFC-202ENST00000422544 STAG3L2P0CL84 134 aa6.82□□□□□ -1.32
PDGFC-202ENST00000422544 STAG3L3P0CL85 134 aa6.82□□□□□ -1.32
PDGFC-202ENST00000422544 UBE2L3P68036 154 aaKnown RBP6.82□□□□□ -1.32
PDGFC-202ENST00000422544 ZNF726P1Q15940 193 aa6.82□□□□□ -1.32
PDGFC-202ENST00000422544 EBLN2Q6P2I7 272 aa6.82□□□□□ -1.32
PDGFC-202ENST00000422544 PQLC2Q6ZP29 291 aa6.82□□□□□ -1.32
PDGFC-202ENST00000422544 FOXI2Q6ZQN5 318 aa6.82□□□□□ -1.32
PDGFC-202ENST00000422544 SSX7Q7RTT5 188 aa6.82□□□□□ -1.32
PDGFC-202ENST00000422544 TRPT1Q86TN4 253 aaKnown RBP6.82□□□□□ -1.32
PDGFC-202ENST00000422544 SLC51BQ86UW2 128 aa6.82□□□□□ -1.32
PDGFC-202ENST00000422544 EXOC3-AS1Q8N2X6 119 aa6.82□□□□□ -1.32
PDGFC-202ENST00000422544 TMED6Q8WW62 240 aa6.82□□□□□ -1.32
PDGFC-202ENST00000422544 RPUSD4Q96CM3 377 aaKnown RBP6.82□□□□□ -1.32
PDGFC-202ENST00000422544 CSTL1Q9H114 145 aa6.82□□□□□ -1.32
PDGFC-202ENST00000422544 KIR2DL5BA0A0G2JN68 375 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 KIR2DL5BA0A0G2JPC4 375 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 A0A0J9YX75 114 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 PRAC2D3DTV9 90 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 ZNF253O75346 499 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 ARL14EPLP0DKL9 152 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 HLA-DRB4P13762 266 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 C4BPBP20851 252 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 GCHFRP30047 84 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 FHITP49789 147 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 APOC4P55056 127 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 RANP62826 216 aaKnown RBP6.81□□□□□ -1.32
PDGFC-202ENST00000422544 PSG9Q00887 426 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 PDE6HQ13956 83 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 KIR2DL5AQ8N109 375 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 OR4B1Q8NGF8 309 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 KIR2DL5BQ8NHK3 375 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 PHYHIPLQ96FC7 376 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 HLA-DRB4X5D2U9 266 aa6.81□□□□□ -1.32
PDGFC-202ENST00000422544 CTXND1A0A1B0GTU2 59 aa6.8□□□□□ -1.32
PDGFC-202ENST00000422544 UMAD1C9J7I0 102 aa6.8□□□□□ -1.32
PDGFC-202ENST00000422544 M0R3E3 92 aa6.8□□□□□ -1.32
PDGFC-202ENST00000422544 CXorf1O96002 111 aa6.8□□□□□ -1.32
PDGFC-202ENST00000422544 NHLRC4P0CG21 123 aaPredicted RBP6.8□□□□□ -1.32
PDGFC-202ENST00000422544 CNN1P51911 297 aaKnown RBP6.8□□□□□ -1.32
PDGFC-202ENST00000422544 FGF8P55075 233 aaPredicted RBP6.8□□□□□ -1.32
PDGFC-202ENST00000422544 HIST1H1AQ02539 215 aaPredicted RBP6.8□□□□□ -1.32
PDGFC-202ENST00000422544 ICAM4Q14773 271 aa6.8□□□□□ -1.32
PDGFC-202ENST00000422544 IQCF2Q8IXL9 164 aa6.8□□□□□ -1.32
PDGFC-202ENST00000422544 OR8A1Q8NGG7 326 aa6.8□□□□□ -1.32
PDGFC-202ENST00000422544 FAM213BQ8TBF2 198 aa6.8□□□□□ -1.32
PDGFC-202ENST00000422544 TM2D3Q9BRN9 247 aa6.8□□□□□ -1.32
PDGFC-202ENST00000422544 AAMDCQ9H7C9 122 aa6.8□□□□□ -1.32
PDGFC-202ENST00000422544 RETNQ9HD89 108 aa6.8□□□□□ -1.32
PDGFC-202ENST00000422544 CLEC5AQ9NY25 188 aa6.8□□□□□ -1.32
PDGFC-202ENST00000422544 AGRNO00468 2067 aa6.8□□□□□ -1.32
PDGFC-202ENST00000422544 DNAH10Q8IVF4 4471 aa6.79□□□□□ -1.32
PDGFC-202ENST00000422544 MAP1LC3B2A6NCE7 125 aa6.79□□□□□ -1.32
PDGFC-202ENST00000422544 UBE2CO00762 179 aa6.79□□□□□ -1.32
PDGFC-202ENST00000422544 DUSP14O95147 198 aaKnown RBP6.79□□□□□ -1.32
PDGFC-202ENST00000422544 CA1P00915 261 aaPredicted RBP6.79□□□□□ -1.32
PDGFC-202ENST00000422544 GIG44P09565 113 aaPredicted RBP6.79□□□□□ -1.32
PDGFC-202ENST00000422544 FXYD7P58549 80 aa6.79□□□□□ -1.32
PDGFC-202ENST00000422544 EIF5AL1Q6IS14 154 aaKnown RBP6.79□□□□□ -1.32
PDGFC-202ENST00000422544 MORN3Q6PF18 240 aaPredicted RBP6.79□□□□□ -1.32
PDGFC-202ENST00000422544 SUN5Q8TC36 379 aa6.79□□□□□ -1.32
PDGFC-202ENST00000422544 MRPL53Q96EL3 112 aaKnown RBP6.79□□□□□ -1.32
PDGFC-202ENST00000422544 SPATA25Q9BR10 227 aa6.79□□□□□ -1.32
PDGFC-202ENST00000422544 MAP1LC3BQ9GZQ8 125 aa6.79□□□□□ -1.32
PDGFC-202ENST00000422544 Q9H3A6 140 aa6.79□□□□□ -1.32
PDGFC-202ENST00000422544 TMPRSS5Q9H3S3 457 aa6.79□□□□□ -1.32
PDGFC-202ENST00000422544 ZMAT4Q9H898 229 aa6.79□□□□□ -1.32
PDGFC-202ENST00000422544 PRELID1Q9Y255 219 aa6.79□□□□□ -1.32
PDGFC-202ENST00000422544 A0A1B0GV50 99 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 PGPA6NDG6 321 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 NUTF2P61970 127 aaKnown RBP6.78□□□□□ -1.32
PDGFC-202ENST00000422544 DEFB135Q30KP9 77 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 DPPA3Q6W0C5 159 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 Q6ZWC4 215 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 LYPD1Q8N2G4 141 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 OR10J6PQ8NGY7 276 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 SFT2D1Q8WV19 159 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 MBD3L1Q8WWY6 194 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 CLUHP3Q96NS8 147 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 SLC35B3Q9H1N7 401 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 OTORQ9NRC9 128 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 TMEM167BQ9NRX6 74 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 XCL2Q9UBD3 114 aa6.78□□□□□ -1.32
PDGFC-202ENST00000422544 IGKV2-40A0A087WW87 121 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-202ENST00000422544 A8MTW9 85 aa6.77□□□□□ -1.33
PDGFC-202ENST00000422544 BOLA2-SMG1P6H3BVE0 249 aa6.77□□□□□ -1.33
PDGFC-202ENST00000422544 SPRY2O43597 315 aa6.77□□□□□ -1.33
PDGFC-202ENST00000422544 IGKV2D-40P01614 121 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-202ENST00000422544 H2AFB1P0C5Y9 115 aa6.77□□□□□ -1.33
PDGFC-202ENST00000422544 CSN1S1P47710 185 aa6.77□□□□□ -1.33
PDGFC-202ENST00000422544 SULT1A2P50226 295 aa6.77□□□□□ -1.33
PDGFC-202ENST00000422544 ERCC8Q13216 396 aa6.77□□□□□ -1.33
PDGFC-202ENST00000422544 FAM74A1Q5RGS3 127 aa6.77□□□□□ -1.33
PDGFC-202ENST00000422544 AMTNQ6UX39 209 aa6.77□□□□□ -1.33
PDGFC-202ENST00000422544 RNF183Q96D59 192 aa6.77□□□□□ -1.33
PDGFC-202ENST00000422544 RCHY1Q96PM5 261 aa6.77□□□□□ -1.33
PDGFC-202ENST00000422544 OVOL2Q9BRP0 275 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms