RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 C15orf32Q32M92 178 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 C19orf54Q5BKX5 351 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 EXOC3-AS1Q8N2X6 119 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 PLA2G2EQ9NZK7 142 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 C17orf58Q2M2W7 97 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 COA6Q5JTJ3 125 aaKnown RBP10.32□□□□□ -0.76
SCAF8-203ENST00000417268 FAM159AQ6UWV7 190 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 LINC00311Q8N616 119 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 MRAP2Q96G30 205 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 IGHV4-39P01824 125 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 IGKV1-16P04430 117 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 ASIPP42127 132 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 PAX8Q06710 450 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 SMPXQ9UHP9 88 aa10.32□□□□□ -0.76
SCAF8-203ENST00000417268 IGHV3OR16-12A0A075B7B8 117 aa10.31□□□□□ -0.76
SCAF8-203ENST00000417268 RRN3P1Q2M238 152 aa10.31□□□□□ -0.76
SCAF8-203ENST00000417268 TRAV8-1A0A0A6YYK1 113 aa10.31□□□□□ -0.76
SCAF8-203ENST00000417268 CR1LQ2VPA4 569 aa10.31□□□□□ -0.76
SCAF8-203ENST00000417268 Q6ZSR3 168 aa10.31□□□□□ -0.76
SCAF8-203ENST00000417268 NPIPB5A8MRT5 1133 aa10.31□□□□□ -0.76
SCAF8-203ENST00000417268 K7EP13 123 aa10.31□□□□□ -0.76
SCAF8-203ENST00000417268 DNAL4O96015 105 aa10.31□□□□□ -0.76
SCAF8-203ENST00000417268 YLPM1P49750 1951 aaKnown RBP10.31□□□□□ -0.76
SCAF8-203ENST00000417268 C11orf53Q8IXP5 236 aa10.31□□□□□ -0.76
SCAF8-203ENST00000417268 C11orf44Q8N8P7 122 aa10.31□□□□□ -0.76
SCAF8-203ENST00000417268 CHTOPQ9Y3Y2 248 aaKnown RBP10.31□□□□□ -0.76
SCAF8-203ENST00000417268 MMP23AO75900 390 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 LYZL1Q6UWQ5 148 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 SRSF8Q9BRL6 282 aaKnown RBP10.3□□□□□ -0.76
SCAF8-203ENST00000417268 SPINK8P0C7L1 97 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 SLAQ13239 276 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 KLF17Q5JT82 389 aaPredicted RBP10.3□□□□□ -0.76
SCAF8-203ENST00000417268 ZC2HC1BQ5TFG8 222 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 RUSC1-AS1Q66K80 236 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 ASCL2Q99929 193 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 SCRT1Q9BWW7 348 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 PIEZO2Q9H5I5 2752 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 PMS2P5A8MQ11 134 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 F2Z2F3 143 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 CDKN1BP46527 198 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 ZNF562Q6V9R5 426 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 V9GYV3 84 aa10.3□□□□□ -0.76
SCAF8-203ENST00000417268 C15orf65H3BRN8 121 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 CCL25O15444 150 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 MLANAQ16655 118 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 CD300EQ496F6 205 aaPredicted RBP10.29□□□□□ -0.76
SCAF8-203ENST00000417268 COPS9Q8WXC6 57 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 SLC50A1Q9BRV3 221 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 ZNRD1Q9P1U0 126 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 UTRNP46939 3433 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 IGKV1-39P01597 117 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 IGKV3-20P01619 116 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 IGKV1D-39P04432 117 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 RNASE1P07998 156 aaKnown RBP10.29□□□□□ -0.76
SCAF8-203ENST00000417268 C1orf122Q6ZSJ8 110 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 HAPLN4Q86UW8 402 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 USMG5Q96IX5 58 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 CHD3Q12873 2000 aaKnown RBP10.29□□□□□ -0.76
SCAF8-203ENST00000417268 H3BRM9 83 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 IFI27P40305 119 aaPredicted RBP10.29□□□□□ -0.76
SCAF8-203ENST00000417268 WDR87Q6ZQQ6 2873 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.29□□□□□ -0.76
SCAF8-203ENST00000417268 ZNF833PQ6ZTB9 187 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 RCHY1Q96PM5 261 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 CHAC1Q9BUX1 264 aa10.29□□□□□ -0.76
SCAF8-203ENST00000417268 CEP295Q9C0D2 2601 aa10.28□□□□□ -0.76
SCAF8-203ENST00000417268 C9orf118A6NHY6 69 aa10.28□□□□□ -0.76
SCAF8-203ENST00000417268 DEFB113Q30KQ7 82 aa10.28□□□□□ -0.76
SCAF8-203ENST00000417268 DLX4Q92988 240 aaPredicted RBP10.28□□□□□ -0.76
SCAF8-203ENST00000417268 TRAV2A0A0B4J234 112 aa10.28□□□□□ -0.76
SCAF8-203ENST00000417268 TRAV8-4A0A0B4J246 113 aa10.28□□□□□ -0.76
SCAF8-203ENST00000417268 ORMDL2Q53FV1 153 aa10.28□□□□□ -0.76
SCAF8-203ENST00000417268 TSSC4Q9Y5U2 329 aaPredicted RBP10.28□□□□□ -0.76
SCAF8-203ENST00000417268 CSPG4Q6UVK1 2322 aa10.28□□□□□ -0.76
SCAF8-203ENST00000417268 LHBP01229 141 aa10.28□□□□□ -0.76
SCAF8-203ENST00000417268 RPL15P61313 204 aaKnown RBP10.28□□□□□ -0.76
SCAF8-203ENST00000417268 SUMO2P61956 95 aaKnown RBP10.28□□□□□ -0.76
SCAF8-203ENST00000417268 TDRG1Q3Y452 100 aa10.28□□□□□ -0.76
SCAF8-203ENST00000417268 TRBV7-1A0A0A6YYK4 115 aa10.27□□□□□ -0.76
SCAF8-203ENST00000417268 PYGO2Q9BRQ0 406 aa10.27□□□□□ -0.76
SCAF8-203ENST00000417268 ZNF329Q86UD4 541 aa10.27□□□□□ -0.77
SCAF8-203ENST00000417268 RNF166Q96A37 237 aaPredicted RBP10.27□□□□□ -0.77
SCAF8-203ENST00000417268 C22orf46C9J442 243 aa10.27□□□□□ -0.77
SCAF8-203ENST00000417268 LINC01559Q495D7 138 aa10.27□□□□□ -0.77
SCAF8-203ENST00000417268 AMN1Q8IY45 258 aa10.27□□□□□ -0.77
SCAF8-203ENST00000417268 RNASE8Q8TDE3 154 aaKnown RBP10.27□□□□□ -0.77
SCAF8-203ENST00000417268 CTSZQ9UBR2 303 aa10.27□□□□□ -0.77
SCAF8-203ENST00000417268 LAGE3Q14657 143 aa10.26□□□□□ -0.77
SCAF8-203ENST00000417268 ETDBQ3ZM63 59 aa10.26□□□□□ -0.77
SCAF8-203ENST00000417268 NUPR1O60356 82 aa10.26□□□□□ -0.77
SCAF8-203ENST00000417268 TRGV9Q99603 122 aa10.26□□□□□ -0.77
SCAF8-203ENST00000417268 PGPEP1Q9NXJ5 209 aa10.26□□□□□ -0.77
SCAF8-203ENST00000417268 BVES-AS1Q5T3Y7 98 aa10.26□□□□□ -0.77
SCAF8-203ENST00000417268 FGF23Q9GZV9 251 aaPredicted RBP10.26□□□□□ -0.77
SCAF8-203ENST00000417268 SMKR1H3BMG3 65 aa10.26□□□□□ -0.77
SCAF8-203ENST00000417268 NSUN5P1Q3KNT7 163 aa10.26□□□□□ -0.77
SCAF8-203ENST00000417268 SLC25A39Q9BZJ4 359 aaPredicted RBP10.26□□□□□ -0.77
SCAF8-203ENST00000417268 IGKV2-40A0A087WW87 121 aaPredicted RBP10.25□□□□□ -0.77
SCAF8-203ENST00000417268 TRAV12-3A0A0B4J271 114 aa10.25□□□□□ -0.77
SCAF8-203ENST00000417268 IGKV2D-40P01614 121 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms