RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TAAR5O14804 337 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 M6PRP20645 277 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 LEPP41159 167 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 CSN1S1P47710 185 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 LRRC37A5PQ49AS3 106 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 KHDC3LQ587J8 217 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 GDF5OSQ5U4N7 250 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 C9orf47Q6ZRZ4 202 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 CCDC28AQ8IWP9 274 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 GNPNAT1Q96EK6 184 aaPredicted RBP4.61□□□□□ -1.67
USP54-202ENST00000413442 C20orf173Q96LM9 149 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 PYGO2Q9BRQ0 406 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 LINC00467Q9BRT7 94 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 NIPSNAP3BQ9BS92 247 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 FUT9Q9Y231 359 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 ALG5Q9Y673 324 aa4.61□□□□□ -1.67
USP54-202ENST00000413442 HUWE1Q7Z6Z7 4374 aaKnown RBP4.6□□□□□ -1.67
USP54-202ENST00000413442 BORCS7-ASMTA0A0B4J1R7 106 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 SERTM2A0A1B0GWG4 89 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 NPIPB6E9PJ23 425 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 H3BQ15 152 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 HLA-DMBP28068 263 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 HIST1H1AQ02539 215 aaPredicted RBP4.6□□□□□ -1.67
USP54-202ENST00000413442 C1orf158Q8N1D5 194 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 OR2G3Q8NGZ4 309 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 RNF141Q8WVD5 230 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 TMED6Q8WW62 240 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 C16orf74Q96GX8 76 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 PAXXQ9BUH6 204 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 NKX6-2Q9C056 277 aaPredicted RBP4.6□□□□□ -1.67
USP54-202ENST00000413442 SLC35B3Q9H1N7 401 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 ZNF586Q9NXT0 402 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 DKK2Q9UBU2 259 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 TNFSF18Q9UNG2 199 aa4.6□□□□□ -1.67
USP54-202ENST00000413442 TIMM8BQ9Y5J9 83 aaPredicted RBP4.6□□□□□ -1.67
USP54-202ENST00000413442 DNAH7Q8WXX0 4024 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 DEFB131BA0A096LNP1 70 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 LOC102723971A0A1B0GUV8 181 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 CBY3A6NI87 242 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 F6UB75 175 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 CRXO43186 299 aaPredicted RBP4.59□□□□□ -1.67
USP54-202ENST00000413442 IGKV3-20P01619 116 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 P0DMU3 169 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 FAM231AP0DMU4 169 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 FAM231CP0DMU5 169 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 CRISP2P16562 243 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 FAM3BP58499 235 aaPredicted RBP4.59□□□□□ -1.67
USP54-202ENST00000413442 NANOS2P60321 138 aaKnown RBP4.59□□□□□ -1.67
USP54-202ENST00000413442 CLINT1Q14677 625 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 RNF212Q495C1 297 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 FFAR4Q5NUL3 377 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 TMEM78Q5T7P6 136 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 RNF182Q8N6D2 247 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 C15orf53Q8NAA6 179 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 TMEM263Q8WUH6 116 aaKnown RBP4.59□□□□□ -1.67
USP54-202ENST00000413442 LINC00476Q8WZB0 136 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 FAM167A-AS1Q96KT0 104 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 LINC01587Q99440 93 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 NDUFAF3Q9BU61 184 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 MBD2Q9UBB5 411 aa4.59□□□□□ -1.67
USP54-202ENST00000413442 TRAV5A0A0B4J249 113 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 H3BNG1 76 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 K7EQM0 130 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 OR7C2O60412 319 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 NDUFB4O95168 129 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 DAD1P61803 113 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 EIF5AP63241 154 aaKnown RBP4.58□□□□□ -1.68
USP54-202ENST00000413442 PMS2P11Q13670 270 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 FCN2Q15485 313 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 SPINK13Q1W4C9 94 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 C12orf74Q32Q52 190 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 ANXA2RQ3ZCQ2 193 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 RPP25LQ8N5L8 163 aaKnown RBP4.58□□□□□ -1.68
USP54-202ENST00000413442 ZNF680Q8NEM1 530 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 OR10G4Q8NGN3 311 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 OR10G9Q8NGN4 311 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 OR10G7Q8NGN6 311 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 SUN5Q8TC36 379 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 FXYD5Q96DB9 178 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 C18orf15Q96N68 181 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 SLC25A2Q9BXI2 301 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 TMEM167BQ9NRX6 74 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 TP53TG3Q9ULZ0 132 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 APLNQ9ULZ1 77 aa4.58□□□□□ -1.68
USP54-202ENST00000413442 TENM2Q9NT68 2774 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 IGHV3OR16-12A0A075B7B8 117 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 HMSDA8MTL9 139 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 SNURFLB1AK76 121 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 KLLNB2CW77 178 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 IGLL5B9A064 214 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 M0R2Z0 102 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 DEFB4AO15263 64 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 CIDEAO60543 219 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 LY6G6CO95867 125 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 CXorf1O96002 111 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 ATP5G1P05496 136 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 GPX1P07203 203 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 ATP5G3P48201 142 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 ZNF138P52744 262 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 DAZ2Q13117 558 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms