RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 IL18BPO95998 194 aa9.16□□□□□ -0.94
PRPF40A-202ENST00000410080 PRSS29PA6NIE9 313 aa9.16□□□□□ -0.94
PRPF40A-202ENST00000410080 PSG3Q16557 428 aa9.16□□□□□ -0.94
PRPF40A-202ENST00000410080 TCTEX1D4Q5JR98 221 aa9.16□□□□□ -0.94
PRPF40A-202ENST00000410080 NPDC1Q9NQX5 325 aaPredicted RBP9.16□□□□□ -0.94
PRPF40A-202ENST00000410080 IGKV1-39P01597 117 aa9.16□□□□□ -0.94
PRPF40A-202ENST00000410080 IGKV1D-39P04432 117 aa9.16□□□□□ -0.94
PRPF40A-202ENST00000410080 NMBP08949 121 aa9.16□□□□□ -0.94
PRPF40A-202ENST00000410080 CR1LQ2VPA4 569 aa9.16□□□□□ -0.94
PRPF40A-202ENST00000410080 MGST2Q99735 147 aa9.16□□□□□ -0.94
PRPF40A-202ENST00000410080 SORL1Q92673 2214 aa9.16□□□□□ -0.94
PRPF40A-202ENST00000410080 ERVH48-1M5A8F1 160 aa9.16□□□□□ -0.94
PRPF40A-202ENST00000410080 PKIGQ9Y2B9 76 aa9.15□□□□□ -0.94
PRPF40A-202ENST00000410080 CHCHD1Q96BP2 118 aaKnown RBP9.15□□□□□ -0.94
PRPF40A-202ENST00000410080 MST1LQ2TV78 715 aa9.15□□□□□ -0.94
PRPF40A-202ENST00000410080 PAQR4Q8N4S7 273 aaPredicted RBP9.15□□□□□ -0.94
PRPF40A-202ENST00000410080 CHKB-CPT1BH3BT56 60 aa9.15□□□□□ -0.94
PRPF40A-202ENST00000410080 PRB2P02812 416 aaPredicted RBP9.15□□□□□ -0.94
PRPF40A-202ENST00000410080 IFI6P09912 130 aa9.15□□□□□ -0.94
PRPF40A-202ENST00000410080 TRBV6-7A0A0A0MS04 114 aa9.15□□□□□ -0.95
PRPF40A-202ENST00000410080 ZNF98A6NK75 572 aa9.15□□□□□ -0.95
PRPF40A-202ENST00000410080 GATA3P23771 443 aa9.15□□□□□ -0.95
PRPF40A-202ENST00000410080 FBLIM1Q8WUP2 373 aa9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 NAA38Q9BRA0 125 aaKnown RBP9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 Q6ZQT7 251 aa9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 ZNF479Q96JC4 524 aa9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 LIME1Q9H400 295 aa9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 OTOGLQ3ZCN5 2332 aa9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 E7EQL1 145 aa9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 H0YJW9 148 aa9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 OCC1Q8TAD7 63 aa9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 ZFP36L1Q07352 338 aaKnown RBP9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 TMEM158Q8WZ71 300 aa9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 SIGMAR1Q99720 223 aa9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 PLSCR4Q9NRQ2 329 aa9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 GNB1LQ9BYB4 327 aa9.14□□□□□ -0.95
PRPF40A-202ENST00000410080 TMEM243Q9BU79 118 aa9.13□□□□□ -0.95
PRPF40A-202ENST00000410080 LINC01549A6NIU2 74 aa9.13□□□□□ -0.95
PRPF40A-202ENST00000410080 CD200R1LQ6Q8B3 271 aa9.13□□□□□ -0.95
PRPF40A-202ENST00000410080 TRPT1Q86TN4 253 aaKnown RBP9.13□□□□□ -0.95
PRPF40A-202ENST00000410080 TBX6O95947 436 aaPredicted RBP9.13□□□□□ -0.95
PRPF40A-202ENST00000410080 TRAV3A0A0B4J244 114 aa9.13□□□□□ -0.95
PRPF40A-202ENST00000410080 FAM90A9PA6NNJ1 464 aa9.13□□□□□ -0.95
PRPF40A-202ENST00000410080 SRP19P09132 144 aaKnown RBP9.13□□□□□ -0.95
PRPF40A-202ENST00000410080 XCL1P47992 114 aa9.13□□□□□ -0.95
PRPF40A-202ENST00000410080 C9orf139Q6ZV77 190 aa9.13□□□□□ -0.95
PRPF40A-202ENST00000410080 TSKUQ8WUA8 353 aa9.13□□□□□ -0.95
PRPF40A-202ENST00000410080 SIGLEC9Q9Y336 463 aa9.13□□□□□ -0.95
PRPF40A-202ENST00000410080 GAS1P54826 345 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 FOXG1P55316 489 aaPredicted RBP9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 ATP6V0BQ99437 205 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 BUB3O43684 328 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 INAFM2P0DMQ5 153 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 A0A1B0GWJ7 208 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 CD177Q8N6Q3 437 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 TRGV9Q99603 122 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 PRRC2AP48634 2157 aaKnown RBP9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 ATP6V0E1O15342 81 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 SPATA31B1PQ5VZV4 182 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 TSSC4Q9Y5U2 329 aaPredicted RBP9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 CREBBPQ92793 2442 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 CRLF1O75462 422 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 GAGE2BQ13066 116 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 ZNRF2Q8NHG8 242 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 FLVCR1-AS1Q8TAF5 88 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 NOP10Q9NPE3 64 aaKnown RBP9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 CACNA1HO95180 2353 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 TRAV9-1A0A075B6T8 112 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 C8orf49Q96NF6 230 aa9.12□□□□□ -0.95
PRPF40A-202ENST00000410080 SHISA3A0PJX4 238 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 HAMPP81172 84 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 HEPN1Q6WQI6 88 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 RNASE13Q5GAN3 156 aaKnown RBP9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 MRPL52Q86TS9 123 aaKnown RBP9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 ZNF503Q96F45 646 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 ZNRD1Q9P1U0 126 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 EGR2P11161 476 aaPredicted RBP9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 SOCS3O14543 225 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 SPG11Q96JI7 2443 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 AGRNO00468 2067 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 hDV102S1A0JD36 115 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 LMO1P25800 156 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 CFHR2P36980 270 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 C5orf47Q569G3 176 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 GAFA1Q96PS6 74 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 NEUROG3Q9Y4Z2 214 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 IGHV4-28A0A0C4DH34 117 aa9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 NTN3O00634 580 aaPredicted RBP9.11□□□□□ -0.95
PRPF40A-202ENST00000410080 A0A087X0K7 114 aa9.1□□□□□ -0.95
PRPF40A-202ENST00000410080 LINC00271P0C7V0 271 aa9.1□□□□□ -0.95
PRPF40A-202ENST00000410080 LINC00114Q6XXX2 140 aa9.1□□□□□ -0.95
PRPF40A-202ENST00000410080 GGNQ86UU5 652 aa9.1□□□□□ -0.95
PRPF40A-202ENST00000410080 A0A1W2PRE2 83 aa9.1□□□□□ -0.95
PRPF40A-202ENST00000410080 K7ENP7 123 aa9.1□□□□□ -0.95
PRPF40A-202ENST00000410080 CCL24O00175 119 aa9.1□□□□□ -0.95
PRPF40A-202ENST00000410080 IGHV1-69DA0A0B4J2H0 117 aa9.1□□□□□ -0.95
PRPF40A-202ENST00000410080 IGHV1-69P01742 117 aa9.1□□□□□ -0.95
PRPF40A-202ENST00000410080 AMBPP02760 352 aa9.1□□□□□ -0.95
PRPF40A-202ENST00000410080 LINC00205P59089 165 aa9.1□□□□□ -0.95
PRPF40A-202ENST00000410080 C9orf153Q5TBE3 101 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms